Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 76 |
SRR924327_primary_scf7180002223163_1-1291
Len: 1,290 bp
E-val: 5.1E-142
|
XP_018955431.1PREDICTED: Krueppel-like factor 4 isoform X3
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
- |
| 77 |
SRR924327_primary_scf7180002223185_428-1864
Len: 1,436 bp
E-val: 9.2E-169
|
KTF84806.1hypothetical protein cypCar_00038154
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 78 |
SRR924327_primary_scf7180002223186_1338-2030
Len: 692 bp
E-val: 2.1E-118
|
XP_026086759.1thyrotropin-releasing hormone-degrading ectoenzyme-like
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0043171P:peptide catabolic process GO:0008270F:zinc ion binding GO:0042277F:peptide binding GO:0070006F:metalloaminopeptidase activity GO:0005615C:extracellular space GO:0005737C:cytoplasm GO:0016020C:membrane |
EC:EC:3.4.11 |
| 79 |
SRR924327_primary_scf7180002223198_1-2917
Len: 2,916 bp
E-val: 1.1E-123
|
XP_018960392.1PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2-like
|
GO:0016567P:protein ubiquitination GO:0003676F:nucleic acid binding GO:0004842F:ubiquitin-protein transferase activity GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
- |
| 80 |
SRR924327_primary_scf7180002223212_1-1243
Len: 1,242 bp
E-val: 4.6E-116
|
XP_018926919.1PREDICTED: paired box protein Pax-1, partial
|
GO:0001501P:skeletal system development GO:0006357P:regulation of transcription by RNA polymerase II GO:0060037P:pharyngeal system development GO:1904888P:cranial skeletal system development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 81 |
SRR924327_primary_scf7180002223220_205-2343
Len: 2,138 bp
E-val: 0.0
|
KTG37837.1hypothetical protein cypCar_00025042
phosphoinositide phospholipase C
|
GO:0007214P:gamma-aminobutyric acid signaling pathway GO:0016042P:lipid catabolic process GO:0032228P:regulation of synaptic transmission, GABAergic GO:0046488P:phosphatidylinositol metabolic process GO:0048015P:phosphatidylinositol-mediated signaling GO:0051209P:release of sequestered calcium ion into cytosol GO:0004435F:phosphatidylinositol-4,5-bisphosphate phospholipase C activity |
EC:EC:3.1.4.11 |
| 82 |
SRR924327_primary_scf7180002223222_261-2014
Len: 1,753 bp
E-val: 1.1E-171
|
XP_018980768.1PREDICTED: LOW QUALITY PROTEIN: microtubule-actin cross-linking factor 1, isoforms 1/2/3/5-like
|
GO:0032886P:regulation of microtubule-based process GO:0042060P:wound healing GO:0045110P:intermediate filament bundle assembly GO:0051893P:regulation of focal adhesion assembly GO:0003779F:actin binding GO:0005198F:structural molecule activity GO:0005509F:calcium ion binding GO:0008017F:microtubule binding GO:0045296F:cadherin binding GO:1990254F:keratin filament binding GO:0005737C:cytoplasm GO:0005874C:microtubule GO:0005886C:plasma membrane GO:0015629C:actin cytoskeleton GO:0030054C:cell junction GO:0042995C:cell projection GO:0045095C:keratin filament |
- |
| 83 |
SRR924327_primary_scf7180002223224_259-1794
Len: 1,535 bp
E-val: 1.2E-291
|
KTG02877.1hypothetical protein cypCar_00042027
Ligases
|
GO:0016874F:ligase activity |
EC:EC:6 |
| 84 |
SRR924327_primary_scf7180002223226_381-1121
Len: 740 bp
E-val: 1.7E-110
|
XP_018979644.1PREDICTED: LOW QUALITY PROTEIN: protein L-Myc-1b-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
- |
| 85 |
SRR924327_primary_scf7180002223254_1-977
Len: 976 bp
E-val: 8.6E-94
|
XP_018975221.1PREDICTED: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
|
GO:0003254P:regulation of membrane depolarization GO:0035725P:sodium ion transmembrane transport GO:0071805P:potassium ion transmembrane transport GO:0005249F:voltage-gated potassium channel activity GO:0005272F:sodium channel activity GO:0030552F:cAMP binding GO:0030424C:axon GO:0030425C:dendrite GO:0098855C:HCN channel complex |
- |
| 86 |
SRR924327_primary_scf7180002223267_925-2164
Len: 1,239 bp
E-val: 1.5E-18
|
XP_018929677.1PREDICTED: zinc finger protein GLIS1-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006999P:nuclear pore organization GO:0015031P:protein transport GO:0051028P:mRNA transport GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0030674F:protein-macromolecule adaptor activity GO:0031965C:nuclear membrane GO:0070762C:nuclear pore transmembrane ring |
- |
| 87 |
SRR924327_primary_scf7180002223302_143-1255
Len: 1,112 bp
E-val: 1.1E-47
|
XP_018961233.1PREDICTED: transmembrane channel-like protein 7
|
GO:0034220P:monoatomic ion transmembrane transport GO:0008270F:zinc ion binding GO:0008381F:mechanosensitive monoatomic ion channel activity GO:0005886C:plasma membrane |
- |
| 88 |
SRR924327_primary_scf7180002223312_170-1369
Len: 1,199 bp
E-val: 7.6E-225
|
XP_026064101.1uncharacterized protein LOC113047065 isoform X1
RNA-directed DNA polymerase
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004519F:endonuclease activity |
EC:EC:2.7.7.49 |
| 89 |
SRR924327_primary_scf7180002223328_1-1329
Len: 1,328 bp
E-val: 2.8E-63
|
XP_016393677.1PREDICTED: heat shock protein HSP 90-alpha 1-like
nucleoside-triphosphate phosphatase
|
GO:0006457P:protein folding GO:0010038P:response to metal ion GO:0030240P:skeletal muscle thin filament assembly GO:0030241P:skeletal muscle myosin thick filament assembly GO:0043627P:response to estrogen GO:0048769P:sarcomerogenesis GO:0050900P:leukocyte migration GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0051082F:unfolded protein binding GO:0140662F:ATP-dependent protein folding chaperone GO:0005634C:nucleus GO:0030018C:Z disc |
EC:EC:3.6.1.15 |
| 90 |
SRR924327_primary_scf7180002223343_1-1606
Len: 1,605 bp
E-val: 7.9E-185
|
KTF90424.1hypothetical protein cypCar_00023530
|
GO:0006812P:monoatomic cation transport GO:0055085P:transmembrane transport GO:0022857F:transmembrane transporter activity |
- |
| 91 |
SRR924327_primary_scf7180002223351_1-1222
Len: 1,221 bp
E-val: 3.4E-164
|
XP_013990514.1PREDICTED: uncharacterized protein K02A2.6-like isoform X1
Acting on peptide bonds (peptidases); RNA-directed DNA polymerase
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding |
EC:EC:3.4.23 EC:EC:2.7.7.49 |
| 92 |
SRR924327_primary_scf7180002223359_385-1308
Len: 923 bp
E-val: 4.7E-126
|
RXN31440.1putative transposase element L1Md-A101/L1Md-A102/L1Md-A2
|
-
|
- |
| 93 |
SRR924327_primary_scf7180002223452_651-1283
Len: 632 bp
E-val: 1.4E-41
|
KTG43457.1hypothetical protein cypCar_00048597
|
GO:0006334P:nucleosome assembly GO:0003677F:DNA binding GO:0030527F:structural constituent of chromatin GO:0000786C:nucleosome GO:0005634C:nucleus |
- |
| 94 |
SRR924327_primary_scf7180002223550_1-1598
Len: 1,597 bp
E-val: 7.6E-63
|
ROL51285.1Cytoplasmic dynein 1 heavy chain 1
Isomerases altering macromolecular conformation; nucleoside-triphosphate phosphatase
|
GO:0007018P:microtubule-based movement GO:0005524F:ATP binding GO:0008569F:minus-end-directed microtubule motor activity GO:0016887F:ATP hydrolysis activity GO:0045505F:dynein intermediate chain binding GO:0051959F:dynein light intermediate chain binding GO:0005858C:axonemal dynein complex GO:0005874C:microtubule |
EC:EC:5.6.1 EC:EC:3.6.1.15 |
| 95 |
SRR924327_primary_scf7180002223588_1753-2638
Len: 885 bp
E-val: 8.3E-19
|
KTF84300.1hypothetical protein cypCar_00018370
|
GO:0007399P:nervous system development GO:0007507P:heart development GO:0036158P:outer dynein arm assembly GO:0036159P:inner dynein arm assembly GO:0060287P:epithelial cilium movement involved in determination of left/right asymmetry GO:0070986P:left/right axis specification GO:0008270F:zinc ion binding GO:0030331F:nuclear estrogen receptor binding GO:0005576C:extracellular region GO:0005634C:nucleus GO:0043005C:neuron projection GO:0120293C:dynein axonemal particle |
- |
| 96 |
SRR924327_primary_scf7180002223592_1-3484
Len: 3,483 bp
E-val: 0.0
|
KTF79111.1hypothetical protein cypCar_00033792
|
GO:0007030P:Golgi organization GO:0015031P:protein transport GO:0016192P:vesicle-mediated transport GO:0046907P:intracellular transport GO:0070973P:protein localization to endoplasmic reticulum exit site GO:0000139C:Golgi membrane GO:0012507C:ER to Golgi transport vesicle membrane GO:0070971C:endoplasmic reticulum exit site |
- |
| 97 |
SRR924327_primary_scf7180002223596_1251-2270
Len: 1,019 bp
E-val: 2.7E-183
|
XP_018979237.1PREDICTED: LOW QUALITY PROTEIN: uracil nucleotide/cysteinyl leukotriene receptor-like
|
GO:0007186P:G protein-coupled receptor signaling pathway GO:0008347P:glial cell migration GO:0004930F:G protein-coupled receptor activity GO:0008142F:oxysterol binding GO:0005886C:plasma membrane |
- |
| 98 |
SRR924327_primary_scf7180002223597_308-1189
Len: 881 bp
E-val: 9.9E-65
|
RXN22433.1LINE-1 type transposase domain-containing 1
|
GO:0032501P:multicellular organismal process |
- |
| 99 |
SRR924327_primary_scf7180002223623_1-2715
Len: 2,714 bp
E-val: 1.3E-27
|
XP_016102609.1PREDICTED: interleukin-1 receptor accessory protein-like 1-B
Hydrolases
|
GO:0019221P:cytokine-mediated signaling pathway GO:0045920P:negative regulation of exocytosis GO:0004908F:interleukin-1 receptor activity GO:0016787F:hydrolase activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
EC:EC:3 |
| 100 |
SRR924327_primary_scf7180002223668_182-1248
Len: 1,066 bp
E-val: 8.8E-108
|
XP_018972509.1PREDICTED: zinc finger BED domain-containing protein 1-like
|
GO:0046983F:protein dimerization activity |
- |