Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 17676 |
SRR953582_primary_scf7180001903524_1394-5579
Len: 4,185 bp
E-val: 2.1E-40
|
ROI15374.1LIM domain only protein 3
|
GO:0035360P:positive regulation of peroxisome proliferator activated receptor signaling pathway GO:0045600P:positive regulation of fat cell differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0070373P:negative regulation of ERK1 and ERK2 cascade GO:2000324P:positive regulation of nuclear receptor-mediated glucocorticoid signaling pathway GO:0003713F:transcription coactivator activity GO:0046872F:metal ion binding GO:0140297F:DNA-binding transcription factor binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 17677 |
SRR953582_primary_scf7180001903529_1-4377
Len: 4,376 bp
E-val: 6.2E-176
|
XP_018974160.1PREDICTED: sterol regulatory element-binding protein cleavage-activating protein-like, partial
|
GO:0009987P:cellular process GO:0005737C:cytoplasm GO:0012505C:endomembrane system GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
- |
| 17678 |
SRR953582_primary_scf7180001903530_1249-5829
Len: 4,580 bp
E-val: 1.1E-37
|
XP_016308203.1PREDICTED: ubiquinone biosynthesis monooxygenase COQ6, mitochondrial-like
|
GO:0006744P:ubiquinone biosynthetic process GO:0004497F:monooxygenase activity GO:0016491F:oxidoreductase activity GO:0016712F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen GO:0071949F:FAD binding GO:0106364F:4-hydroxy-3-all-trans-polyprenylbenzoate oxygenase activity GO:0005739C:mitochondrion GO:0005743C:mitochondrial inner membrane GO:0005794C:Golgi apparatus GO:0031314C:extrinsic component of mitochondrial inner membrane GO:0042995C:cell projection |
- |
| 17679 |
SRR953582_primary_scf7180001903530_6108-6849
Len: 741 bp
E-val:
|
-
|
-
|
- |
| 17680 |
SRR953582_primary_scf7180001903530_7082-9843
Len: 2,761 bp
E-val: 3.0E-14
|
XP_017332515.1PREDICTED: ubiquinone biosynthesis monooxygenase COQ6, mitochondrial
Acting on paired donors, with incorporation or reduction of molecular oxygen. The oxygen incorporated need not be derived from O2; n/a
|
GO:0006744P:ubiquinone biosynthetic process GO:0016712F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen GO:0071949F:FAD binding GO:0106364F:4-hydroxy-3-all-trans-polyprenylbenzoate oxygenase activity GO:0005794C:Golgi apparatus GO:0031314C:extrinsic component of mitochondrial inner membrane GO:0042995C:cell projection |
EC:EC:1.14.14 EC:EC:1.14.15.45 |
| 17681 |
SRR953582_primary_scf7180001903533_484-7372
Len: 6,888 bp
E-val: 3.8E-151
|
XP_018930216.1PREDICTED: mucin-5AC-like
|
GO:0007166P:cell surface receptor signaling pathway GO:0007186P:G protein-coupled receptor signaling pathway GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane GO:0016020C:membrane |
- |
| 17682 |
SRR953582_primary_scf7180001903548_1-2222
Len: 2,221 bp
E-val: 0.0
|
XP_018967682.1PREDICTED: kelch domain-containing protein 7A-like
|
GO:0016020C:membrane |
- |
| 17683 |
SRR953582_primary_scf7180001903560_941-1675
Len: 734 bp
E-val: 8.4E-134
|
XP_018925143.1PREDICTED: E3 ubiquitin-protein ligase RNF182-like
|
- | |
| 17684 |
SRR953582_primary_scf7180001903560_4326-6010
Len: 1,684 bp
E-val: 2.1E-10
|
KTF87136.1hypothetical protein cypCar_00029281
|
-
|
- |
| 17685 |
SRR953582_primary_scf7180001903563_290-1658
Len: 1,368 bp
E-val: 1.4E-4
|
ROL47746.1Prostaglandin F2-alpha receptor
|
GO:0006954P:inflammatory response GO:0007186P:G protein-coupled receptor signaling pathway GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0004930F:G protein-coupled receptor activity GO:0004958F:prostaglandin F receptor activity GO:0004960F:thromboxane receptor activity GO:0005886C:plasma membrane GO:0016020C:membrane |
- |
| 17686 |
SRR953582_primary_scf7180001903563_4725-8420
Len: 3,695 bp
E-val: 0.0
|
XP_018957626.1PREDICTED: zinc finger and BTB domain-containing protein 38-like isoform X1
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 17687 |
SRR953582_primary_scf7180001903570_822-5409
Len: 4,587 bp
E-val: 8.8E-64
|
KTG39365.1hypothetical protein cypCar_00000859, partial
|
GO:0009266P:response to temperature stimulus GO:0032922P:circadian regulation of gene expression GO:0043153P:entrainment of circadian clock by photoperiod GO:0045892P:negative regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0071949F:FAD binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 17688 |
SRR953582_primary_scf7180001903573_2532-7785
Len: 5,253 bp
E-val: 1.4E-44
|
XP_018948577.1PREDICTED: protein scribble homolog isoform X1
|
GO:0043113P:receptor clustering GO:0045197P:establishment or maintenance of epithelial cell apical/basal polarity GO:0098609P:cell-cell adhesion GO:0098887P:neurotransmitter receptor transport, endosome to postsynaptic membrane GO:0098968P:neurotransmitter receptor transport postsynaptic membrane to endosome GO:0019901F:protein kinase binding GO:0005912C:adherens junction GO:0014069C:postsynaptic density GO:0016323C:basolateral plasma membrane GO:0045211C:postsynaptic membrane |
- |
| 17689 |
SRR953582_primary_scf7180001903575_1-1508
Len: 1,507 bp
E-val: 2.3E-53
|
XP_026074916.1cortexin-3-like
|
GO:0016020C:membrane |
- |
| 17690 |
SRR953582_primary_scf7180001903589_1967-2366
Len: 399 bp
E-val: 1.9E-7
|
RXN16428.1hypothetical protein ROHU_027534
|
-
|
- |
| 17691 |
SRR953582_primary_scf7180001903589_3132-3377
Len: 245 bp
E-val: 2.7E-36
|
NP_001189362.1cortexin-2
|
GO:0016020C:membrane |
- |
| 17692 |
SRR953582_primary_scf7180001903589_6496-7401
Len: 905 bp
E-val: 4.0E-37
|
KTF80699.1hypothetical protein cypCar_00034542
|
GO:0006884P:cell volume homeostasis GO:0035725P:sodium ion transmembrane transport GO:0055064P:chloride ion homeostasis GO:0055075P:potassium ion homeostasis GO:0055078P:sodium ion homeostasis GO:1902476P:chloride transmembrane transport GO:1990573P:potassium ion import across plasma membrane GO:0008511F:sodium:potassium:chloride symporter activity GO:0016324C:apical plasma membrane |
- |
| 17693 |
SRR953582_primary_scf7180001903594_1-5856
Len: 5,855 bp
E-val: 1.2E-121
|
XP_026063313.1delphilin-like isoform X1
|
GO:0006355P:regulation of DNA-templated transcription GO:0004866F:endopeptidase inhibitor activity GO:0005576C:extracellular region GO:0005634C:nucleus |
- |
| 17694 |
SRR953582_primary_scf7180001903607_1-5598
Len: 5,597 bp
E-val: 4.8E-104
|
KTF76717.1hypothetical protein cypCar_00027632
|
GO:0009987P:cellular process GO:0048513P:animal organ development GO:0061061P:muscle structure development GO:0005488F:binding GO:0005622C:intracellular anatomical structure |
- |
| 17695 |
SRR953582_primary_scf7180001903610_1-8868
Len: 8,867 bp
E-val: 0.0
|
XP_018949390.1PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like
|
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane GO:0005912C:adherens junction |
- |
| 17696 |
SRR953582_primary_scf7180001903625_860-5135
Len: 4,275 bp
E-val: 2.3E-45
|
NP_942101.1G1 to S phase transition 1, like
|
GO:0001944P:vasculature development |
- |
| 17697 |
SRR953582_primary_scf7180001903629_2056-6561
Len: 4,505 bp
E-val: 0.0
|
KTF93936.1hypothetical protein cypCar_00033217
chondroitin-glucuronate 5-epimerase
|
GO:0047757F:chondroitin-glucuronate 5-epimerase activity GO:0016020C:membrane |
EC:EC:5.1.3.19 |
| 17698 |
SRR953582_primary_scf7180001903645_1-4307
Len: 4,306 bp
E-val: 1.6E-19
|
CDQ92123.1unnamed protein product, partial
|
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0006887P:exocytosis GO:0032611P:interleukin-1 beta production GO:0032922P:circadian regulation of gene expression GO:0043153P:entrainment of circadian clock by photoperiod GO:0000976F:transcription cis-regulatory region binding GO:0001222F:transcription corepressor binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0012505C:endomembrane system GO:0031982C:vesicle GO:0032154C:cleavage furrow |
- |
| 17699 |
SRR953582_primary_scf7180001903657_1-3781
Len: 3,780 bp
E-val: 6.0E-34
|
XP_024260586.1adhesion G protein-coupled receptor L1-like
|
GO:0007157P:heterophilic cell-cell adhesion GO:0007166P:cell surface receptor signaling pathway GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0016524F:latrotoxin receptor activity GO:0030246F:carbohydrate binding GO:0030424C:axon GO:0042734C:presynaptic membrane |
- |
| 17700 |
SRR953582_primary_scf7180001903672_2769-5984
Len: 3,215 bp
E-val: 1.3E-42
|
RXN02941.1meiosis-specific nuclear structural 1
|
GO:0044782P:cilium organization GO:0051321P:meiotic cell cycle GO:0005634C:nucleus GO:0005856C:cytoskeleton GO:0031514C:motile cilium |
- |