Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 20001 |
SRR953582_primary_scf7180001953499_1-1816
Len: 1,815 bp
E-val: 1.2E-32
|
XP_018955155.1PREDICTED: protein HID1-like, partial
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0003964F:RNA-directed DNA polymerase activity GO:0000138C:Golgi trans cisterna GO:0005797C:Golgi medial cisterna GO:0016020C:membrane |
- |
| 20002 |
SRR953582_primary_scf7180001953548_1-2317
Len: 2,316 bp
E-val: 4.3E-99
|
KTF75810.1hypothetical protein cypCar_00048223
|
GO:0006895P:Golgi to endosome transport GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:1990390P:protein K33-linked ubiquitination GO:0019964F:type II interferon binding GO:0005802C:trans-Golgi network GO:0005829C:cytosol GO:0016605C:PML body |
- |
| 20003 |
SRR953582_primary_scf7180001953576_1-2123
Len: 2,122 bp
E-val: 7.4E-66
|
KTF81053.1hypothetical protein cypCar_00015816
|
GO:0033344P:cholesterol efflux GO:0042632P:cholesterol homeostasis GO:0055085P:transmembrane transport GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0034041F:ABC-type sterol transporter activity GO:0140359F:ABC-type transporter activity GO:0005886C:plasma membrane GO:0016020C:membrane |
- |
| 20004 |
SRR953582_primary_scf7180001953605_605-1300
Len: 695 bp
E-val: 5.7E-124
|
XP_018944765.1PREDICTED: homeobox protein SIX5-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
- |
| 20005 |
SRR953582_primary_scf7180001953606_1-1337
Len: 1,336 bp
E-val: 8.3E-71
|
KTG04969.1hypothetical protein cypCar_00001218
Intramolecular transferases
|
GO:0000455P:enzyme-directed rRNA pseudouridine synthesis GO:0003723F:RNA binding GO:0009982F:pseudouridine synthase activity |
EC:EC:5.4 |
| 20006 |
SRR953582_primary_scf7180001953623_824-2849
Len: 2,025 bp
E-val: 3.9E-32
|
XP_018937752.1PREDICTED: DNA polymerase epsilon subunit 4-like
|
GO:0006261P:DNA-templated DNA replication GO:0006955P:immune response GO:0060326P:cell chemotaxis GO:0008009F:chemokine activity GO:0046982F:protein heterodimerization activity GO:0005576C:extracellular region GO:0008622C:epsilon DNA polymerase complex |
- |
| 20007 |
SRR953582_primary_scf7180001953627_428-2627
Len: 2,199 bp
E-val: 1.1E-93
|
XP_018969112.1PREDICTED: N6-adenosine-methyltransferase subunit METTL3
mRNA m(6)A methyltransferase; mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase
|
GO:0001510P:RNA methylation GO:0001556P:oocyte maturation GO:0006397P:mRNA processing GO:0006974P:DNA damage response GO:0007283P:spermatogenesis GO:0007530P:sex determination GO:0019827P:stem cell population maintenance GO:0021861P:forebrain radial glial cell differentiation GO:0030317P:flagellated sperm motility GO:0031053P:primary miRNA processing GO:0034644P:cellular response to UV GO:0042981P:regulation of apoptotic process GO:0045580P:regulation of T cell differentiation GO:0045746P:negative regulation of Notch signaling pathway GO:0051445P:regulation of meiotic cell cycle GO:0060339P:negative regulation of type I interferon-mediated signaling pathway GO:0060853P:Notch signaling pathway involved in arterial endothelial cell fate commitment GO:0061157P:mRNA destabilization GO:0071425P:hematopoietic stem cell proliferation GO:0090365P:regulation of mRNA modification GO:0098508P:endothelial to hematopoietic transition GO:1901342P:regulation of vasculature development GO:1902036P:regulation of hematopoietic stem cell differentiation GO:1903679P:positive regulation of cap-independent translational initiation GO:0001734F:mRNA m(6)A methyltransferase activity GO:0003729F:mRNA binding GO:0016422F:mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity GO:0046982F:protein heterodimerization activity GO:1904047F:S-adenosyl-L-methionine binding GO:0016607C:nuclear speck GO:0036396C:RNA N6-methyladenosine methyltransferase complex |
EC:EC:2.1.1.348 EC:EC:2.1.1.62 |
| 20008 |
SRR953582_primary_scf7180001953649_1-2971
Len: 2,970 bp
E-val: 5.1E-20
|
KTF81347.1hypothetical protein cypCar_00021111
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0008270F:zinc ion binding |
- |
| 20009 |
SRR953582_primary_scf7180001953650_2621-3601
Len: 980 bp
E-val: 2.4E-35
|
XP_016143315.1PREDICTED: 43 kDa receptor-associated protein of the synapse-like
|
GO:0007271P:synaptic transmission, cholinergic GO:0007416P:synapse assembly GO:1900075P:positive regulation of neuromuscular synaptic transmission GO:0008270F:zinc ion binding GO:0033130F:acetylcholine receptor binding GO:0043495F:protein-membrane adaptor activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0031594C:neuromuscular junction |
- |
| 20010 |
SRR953582_primary_scf7180001953653_614-1111
Len: 497 bp
E-val: 1.7E-85
|
KTG47036.1hypothetical protein cypCar_00028894
|
GO:0006355P:regulation of DNA-templated transcription GO:0003700F:DNA-binding transcription factor activity GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
- |
| 20011 |
SRR953582_primary_scf7180001953687_1662-2661
Len: 999 bp
E-val: 1.4E-62
|
KTG35446.1hypothetical protein cypCar_00024001
|
- | |
| 20012 |
SRR953582_primary_scf7180001953724_1-3251
Len: 3,250 bp
E-val: 1.7E-32
|
XP_018967819.1PREDICTED: receptor-type tyrosine-protein phosphatase gamma-like
carbonic anhydrase; protein-tyrosine-phosphatase
|
GO:0006338P:chromatin remodeling GO:0004089F:carbonate dehydratase activity GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0008270F:zinc ion binding GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0005886C:plasma membrane |
EC:EC:4.2.1.1 EC:EC:3.1.3.48 |
| 20013 |
SRR953582_primary_scf7180001953772_1-2465
Len: 2,464 bp
E-val: 2.7E-27
|
XP_018940022.1PREDICTED: repressor of RNA polymerase III transcription MAF1 homolog isoform X1
|
GO:0016480P:negative regulation of transcription by RNA polymerase III GO:0000994F:RNA polymerase III core binding GO:0005634C:nucleus |
- |
| 20014 |
SRR953582_primary_scf7180001953773_1-2426
Len: 2,425 bp
E-val: 1.7E-18
|
XP_016118711.1PREDICTED: low density lipoprotein receptor adapter protein 1-like
|
GO:0005622C:intracellular anatomical structure |
- |
| 20015 |
SRR953582_primary_scf7180001953776_1-3039
Len: 3,038 bp
E-val: 2.2E-55
|
XP_018979063.1PREDICTED: LOW QUALITY PROTEIN: cystic fibrosis transmembrane conductance regulator-like
|
GO:0006810P:transport GO:0009987P:cellular process GO:0048856P:anatomical structure development GO:0022857F:transmembrane transporter activity GO:0005737C:cytoplasm GO:0016020C:membrane |
- |
| 20016 |
SRR953582_primary_scf7180001953795_1-1266
Len: 1,265 bp
E-val: 2.2E-28
|
KTF89922.1hypothetical protein cypCar_00015233
|
GO:0007166P:cell surface receptor signaling pathway GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0016525P:negative regulation of angiogenesis GO:0043652P:engulfment of apoptotic cell GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane GO:0014069C:postsynaptic density GO:0030425C:dendrite |
- |
| 20017 |
SRR953582_primary_scf7180001953809_596-1582
Len: 986 bp
E-val: 7.7E-183
|
XP_018980408.1PREDICTED: free fatty acid receptor 3-like
|
GO:0007186P:G protein-coupled receptor signaling pathway GO:0071398P:cellular response to fatty acid GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane |
- |
| 20018 |
SRR953582_primary_scf7180001953816_434-2124
Len: 1,690 bp
E-val: 2.0E-21
|
KTF78963.1hypothetical protein cypCar_00032387
|
GO:0001508P:action potential GO:0007165P:signal transduction GO:0048812P:neuron projection morphogenesis GO:0051260P:protein homooligomerization GO:0071805P:potassium ion transmembrane transport GO:0004857F:enzyme inhibitor activity GO:0005251F:delayed rectifier potassium channel activity GO:0017020F:myosin phosphatase regulator activity GO:0019901F:protein kinase binding GO:0005737C:cytoplasm GO:0008076C:voltage-gated potassium channel complex |
- |
| 20019 |
SRR953582_primary_scf7180001953829_120-1400
Len: 1,280 bp
E-val: 5.0E-57
|
XP_018954846.1PREDICTED: polyhomeotic-like protein 2
|
GO:0005488F:binding |
- |
| 20020 |
SRR953582_primary_scf7180001953830_167-3785
Len: 3,618 bp
E-val: 1.7E-25
|
XP_016339877.1PREDICTED: trafficking protein particle complex subunit 8 isoform X2
|
GO:1990072C:TRAPPIII protein complex |
- |
| 20021 |
SRR953582_primary_scf7180001953839_1-1940
Len: 1,939 bp
E-val: 3.3E-44
|
XP_016127697.1PREDICTED: uncharacterized protein KIAA1109-like
|
GO:0006909P:phagocytosis GO:0032456P:endocytic recycling GO:0048488P:synaptic vesicle endocytosis GO:0120009P:intermembrane lipid transfer GO:1904121F:phosphatidylethanolamine transfer activity GO:0005739C:mitochondrion GO:0005783C:endoplasmic reticulum GO:0031090C:organelle membrane GO:0140268C:endoplasmic reticulum-plasma membrane contact site |
- |
| 20022 |
SRR953582_primary_scf7180001953856_226-2299
Len: 2,073 bp
E-val: 1.9E-58
|
XP_016338624.1PREDICTED: SET and MYND domain-containing protein 4-like
|
GO:0007507P:heart development GO:0003824F:catalytic activity |
- |
| 20023 |
SRR953582_primary_scf7180001953859_1171-2287
Len: 1,116 bp
E-val: 5.5E-52
|
XP_018961916.1PREDICTED: REST corepressor 2-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045892P:negative regulation of DNA-templated transcription GO:0003714F:transcription corepressor activity GO:0000118C:histone deacetylase complex GO:0005667C:transcription regulator complex |
- |
| 20024 |
SRR953582_primary_scf7180001953860_1-1044
Len: 1,043 bp
E-val: 1.3E-42
|
XP_018930748.1PREDICTED: activated CDC42 kinase 1-like
Transferring phosphorus-containing groups
|
GO:0004713F:protein tyrosine kinase activity GO:0110165C:cellular anatomical structure |
EC:EC:2.7.10 |
| 20025 |
SRR953582_primary_scf7180001953874_1-1745
Len: 1,744 bp
E-val: 6.4E-140
|
KTF71048.1hypothetical protein cypCar_00032189
|
GO:0006939P:smooth muscle contraction GO:0007268P:chemical synaptic transmission GO:0007623P:circadian rhythm GO:0042310P:vasoconstriction GO:0043410P:positive regulation of MAPK cascade GO:0071880P:adenylate cyclase-activating adrenergic receptor signaling pathway GO:0071881P:adenylate cyclase-inhibiting adrenergic receptor signaling pathway GO:0098664P:G protein-coupled serotonin receptor signaling pathway GO:0004938F:alpha2-adrenergic receptor activity GO:0004993F:G protein-coupled serotonin receptor activity GO:0005886C:plasma membrane GO:0045202C:synapse |
- |