Gene Function: Cell Signaling

Functional and statistical data for significant genes

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GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR924681_primary_scf7180004006373_1-1051
Len: 1,050 bp
Hits: 20
E-val: 2.70E-16
Sim: 98.46%
 RXN34958.11-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4-like isoform X1
GO:0016042P:lipid catabolic process
GO:0046488P:phosphatidylinositol metabolic process
GO:0048015P:phosphatidylinositol-mediated signaling
GO:0051209P:release of sequestered calcium ion into cytosol
GO:0004435F:phosphatidylinositol-4,5-bisphosphate phospholipase C activity
GO:0005509F:calcium ion binding
Cell Signaling
SRR924681_primary_scf7180004019065_1-987
Len: 986 bp
Hits: 20
E-val: 6.20E-23
Sim: 96.64%
 XP_018969306.1 LOW QUALITY PROTEIN: dystrophin-like
GO:0006936P:muscle contraction
GO:0007525P:somatic muscle development
GO:0016203P:muscle attachment
GO:0036269P:swimming behavior
GO:0045214P:sarcomere organization
GO:0048666P:neuron development
GO:0048741P:skeletal muscle fiber development
GO:0061053P:somite development
GO:0090257P:regulation of muscle system process
GO:0099536P:synaptic signaling
GO:0003779F:actin binding
GO:0008270F:zinc ion binding
GO:0005737C:cytoplasm
GO:0005856C:cytoskeleton
GO:0016010C:dystrophin-associated glycoprotein complex
GO:0042383C:sarcolemma
GO:0045211C:postsynaptic membrane
GO:0120025C:plasma membrane bounded cell projection
Cell Signaling
SRR924681_primary_scf7180004030970_1-1116
Len: 1,115 bp
Hits: 20
E-val: 4.80E-56
Sim: 84.24%
 XP_018924875.1 growth hormone secretagogue receptor type 1-like
GO:0007186P:G protein-coupled receptor signaling pathway
GO:0008528F:G protein-coupled peptide receptor activity
GO:0005886C:plasma membrane
Cell Signaling
SRR924681_primary_scf7180004031746_1-1092
Len: 1,091 bp
Hits: 20
E-val: 7.00E-44
Sim: 92.25%
 XP_018970217.1 LOW QUALITY PROTEIN: G-protein coupled receptor 98-like
GO:0007166P:cell surface receptor signaling pathway
GO:0007186P:G protein-coupled receptor signaling pathway
GO:0007194P:negative regulation of adenylate cyclase activity
GO:0007601P:visual perception
GO:0007605P:sensory perception of sound
GO:0031647P:regulation of protein stability
GO:0042462P:eye photoreceptor cell development
GO:0071277P:cellular response to calcium ion
GO:0097264P:self proteolysis
GO:0001965F:G-protein alpha-subunit binding
GO:0004930F:G protein-coupled receptor activity
GO:0010855F:adenylate cyclase inhibitor activity
GO:0016787F:hydrolase activity
GO:0001917C:photoreceptor inner segment
GO:0005737C:cytoplasm
GO:0060171C:stereocilium membrane
Cell Signaling
SRR924681_primary_scf7180004034675_1-1055
Len: 1,054 bp
Hits: 20
E-val: 1.20E-32
Sim: 72.87%
 XP_026120599.1tyrosine-protein phosphatase non-receptor type 11
GO:0000165P:MAPK cascade
GO:0000278P:mitotic cell cycle
GO:0003146P:heart jogging
GO:0008283P:cell population proliferation
GO:0035675P:neuromast hair cell development
GO:0048703P:embryonic viscerocranium morphogenesis
GO:0048840P:otolith development
GO:0060027P:convergent extension involved in gastrulation
GO:0060028P:convergent extension involved in axis elongation
GO:1902230P:negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage
GO:0001784F:phosphotyrosine residue binding
GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity
GO:0019899F:enzyme binding
GO:0005737C:cytoplasm
Cell Signaling
SRR924681_primary_scf7180004045546_246-1140
Len: 894 bp
Hits: 20
E-val: 1.00E-88
Sim: 59.21%
 XP_018972772.1 matrix metalloproteinase-9-like
GO:0002633P:positive regulation of granuloma formation
GO:0003417P:growth plate cartilage development
GO:0009617P:response to bacterium
GO:0030199P:collagen fibril organization
GO:0030511P:positive regulation of transforming growth factor beta receptor signaling pathway
GO:0031101P:fin regeneration
GO:0033334P:fin morphogenesis
GO:0035701P:hematopoietic stem cell migration
GO:0042060P:wound healing
GO:0060429P:epithelium development
GO:0090594P:inflammatory response to wounding
GO:0008233F:peptidase activity
GO:0110165C:cellular anatomical structure
Cell Signaling
SRR941867_primary_scf7180002027462_658-3650
Len: 2,992 bp
Hits: 20
E-val: 5.40E-155
Sim: 90.56%
 XP_018961064.1 olfactory receptor 4K2-like
GO:0007186P:G protein-coupled receptor signaling pathway
GO:0050911P:detection of chemical stimulus involved in sensory perception of smell
GO:0004930F:G protein-coupled receptor activity
GO:0004984F:olfactory receptor activity
GO:0005549F:odorant binding
GO:0016020C:membrane
Cell Signaling
SRR941867_primary_scf7180002027901_190-4902
Len: 4,712 bp
Hits: 20
E-val: 0
Sim: 91.78%
 XP_018921465.1 LOW QUALITY PROTEIN: putative Polycomb group protein ASXL1
GO:0009887P:animal organ morphogenesis
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0003677F:DNA binding
GO:0003682F:chromatin binding
GO:0008270F:zinc ion binding
GO:0042975F:peroxisome proliferator activated receptor binding
GO:0035517C:PR-DUB complex
Cell Signaling
SRR941867_primary_scf7180002028613_1497-2543
Len: 1,046 bp
Hits: 20
E-val: 1.10E-179
Sim: 91.92%
 XP_018935057.1 transcription factor SOX-4-like
GO:0000122P:negative regulation of transcription by RNA polymerase II
GO:0007420P:brain development
GO:0030182P:neuron differentiation
GO:0045879P:negative regulation of smoothened signaling pathway
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0061386P:closure of optic fissure
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0005634C:nucleus
Cell Signaling
SRR941867_primary_scf7180002029016_327-5549
Len: 5,222 bp
Hits: 20
E-val: 0
Sim: 91.34%
 XP_018957117.1 LOW QUALITY PROTEIN: adenomatous polyposis coli protein 2
GO:0001708P:cell fate specification
GO:0007026P:negative regulation of microtubule depolymerization
GO:0007389P:pattern specification process
GO:0007399P:nervous system development
GO:0016477P:cell migration
GO:0048513P:animal organ development
GO:0090090P:negative regulation of canonical Wnt signaling pathway
GO:0008013F:beta-catenin binding
GO:0008017F:microtubule binding
GO:0045295F:gamma-catenin binding
GO:0005881C:cytoplasmic microtubule
GO:0016342C:catenin complex
GO:0030877C:beta-catenin destruction complex
GO:0043231C:intracellular membrane-bounded organelle
Cell Signaling
SRR941867_primary_scf7180002029016_6043-6933
Len: 890 bp
Hits: 20
E-val: 2.80E-152
Sim: 86.7%
 XP_018967869.1 LOW QUALITY PROTEIN: adenomatous polyposis coli protein 2-like
GO:0001708P:cell fate specification
GO:0007026P:negative regulation of microtubule depolymerization
GO:0007389P:pattern specification process
GO:0007399P:nervous system development
GO:0016477P:cell migration
GO:0048513P:animal organ development
GO:0090090P:negative regulation of canonical Wnt signaling pathway
GO:0008013F:beta-catenin binding
GO:0008017F:microtubule binding
GO:0045295F:gamma-catenin binding
GO:0005881C:cytoplasmic microtubule
GO:0016342C:catenin complex
GO:0030877C:beta-catenin destruction complex
GO:0043231C:intracellular membrane-bounded organelle
Cell Signaling
SRR941867_primary_scf7180002029723_1-1638
Len: 1,637 bp
Hits: 20
E-val: 7.60E-18
Sim: 99.53%
 CAF97760.1unnamed protein product, partial
GO:0000226P:microtubule cytoskeleton organization
GO:0001755P:neural crest cell migration
GO:0007155P:cell adhesion
GO:0007405P:neuroblast proliferation
GO:0008360P:regulation of cell shape
GO:0021535P:cell migration in hindbrain
GO:0022010P:central nervous system myelination
GO:0022011P:myelination in peripheral nervous system
GO:0030010P:establishment of cell polarity
GO:0030036P:actin cytoskeleton organization
GO:0035845P:photoreceptor cell outer segment organization
GO:0035907P:dorsal aorta development
GO:0043010P:camera-type eye development
GO:0045197P:establishment or maintenance of epithelial cell apical/basal polarity
GO:0048048P:embryonic eye morphogenesis
GO:0048696P:regulation of collateral sprouting in absence of injury
GO:0051301P:cell division
GO:0051660P:establishment of centrosome localization
GO:0060242P:contact inhibition
GO:0072554P:blood vessel lumenization
GO:1902414P:protein localization to cell junction
GO:0035091F:phosphatidylinositol binding
GO:0005912C:adherens junction
GO:0005938C:cell cortex
GO:0016324C:apical plasma membrane
GO:0043296C:apical junction complex
Cell Signaling
SRR941867_primary_scf7180002029864_1-967
Len: 966 bp
Hits: 20
E-val: 4.90E-89
Sim: 72.98%
 XP_026091924.1adhesion G-protein coupled receptor G7-like isoform X2
GO:0007166P:cell surface receptor signaling pathway
GO:0007186P:G protein-coupled receptor signaling pathway
GO:0004930F:G protein-coupled receptor activity
GO:0005886C:plasma membrane
GO:0016020C:membrane
Cell Signaling
SRR941867_primary_scf7180002030312_173-1285
Len: 1,112 bp
Hits: 20
E-val: 9.90E-203
Sim: 88.65%
 XP_018980065.1 glucose-dependent insulinotropic receptor-like
GO:0000398P:mRNA splicing, via spliceosome
GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway
GO:0019222P:regulation of metabolic process
GO:0003723F:RNA binding
GO:0004930F:G protein-coupled receptor activity
GO:0031210F:phosphatidylcholine binding
GO:0005686C:U2 snRNP
GO:0005737C:cytoplasm
GO:0005886C:plasma membrane
GO:0071011C:precatalytic spliceosome
GO:0071013C:catalytic step 2 spliceosome
Cell Signaling
SRR941867_primary_scf7180002030353_855-1745
Len: 890 bp
Hits: 20
E-val: 9.10E-159
Sim: 98.41%
 XP_016376019.1 CXXC-type zinc finger protein 4
GO:0016055P:Wnt signaling pathway
GO:0008270F:zinc ion binding
GO:0008327F:methyl-CpG binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
Cell Signaling
SRR941867_primary_scf7180002030423_1619-3518
Len: 1,899 bp
Hits: 20
E-val: 3.00E-34
Sim: 78.88%
 XP_018934765.1 lymphoid enhancer-binding factor 1-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0060070P:canonical Wnt signaling pathway
GO:0060429P:epithelium development
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000785C:chromatin
GO:1990907C:beta-catenin-TCF complex
Cell Signaling
SRR941867_primary_scf7180002030589_1-2166
Len: 2,165 bp
Hits: 20
E-val: 1.00E-264
Sim: 84.69%
 XP_018966268.1 E3 ubiquitin-protein ligase DTX3L-like isoform X1
GO:0007219P:Notch signaling pathway
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005737C:cytoplasm
Cell Signaling
SRR941867_primary_scf7180002031398_5104-5561
Len: 457 bp
Hits: 20
E-val: 2.70E-29
Sim: 96.92%
 XP_004069161.1adiponectin receptor protein 1
GO:0033211P:adiponectin-activated signaling pathway
GO:0038023F:signaling receptor activity
GO:0046872F:metal ion binding
GO:0005886C:plasma membrane
Cell Signaling
SRR941867_primary_scf7180002031747_349-2757
Len: 2,408 bp
Hits: 20
E-val: 0
Sim: 88.15%
 XP_026118982.1glutamate receptor ionotropic, NMDA 2B-like isoform X1
GO:0034220P:monoatomic ion transmembrane transport
GO:0035235P:ionotropic glutamate receptor signaling pathway
GO:0035249P:synaptic transmission, glutamatergic
GO:0060079P:excitatory postsynaptic potential
GO:0060291P:long-term synaptic potentiation
GO:0004972F:NMDA glutamate receptor activity
GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential
GO:0017146C:NMDA selective glutamate receptor complex
GO:0098839C:postsynaptic density membrane
Cell Signaling
SRR941867_primary_scf7180002031814_1-1089
Len: 1,088 bp
Hits: 20
E-val: 9.80E-38
Sim: 96.8%
 XP_018920175.1 LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type receptor 2-like
GO:0007156P:homophilic cell-cell adhesion
GO:0007166P:cell surface receptor signaling pathway
GO:0007186P:G protein-coupled receptor signaling pathway
GO:0008104P:intracellular protein localization
GO:0021754P:facial nucleus development
GO:0055113P:epiboly involved in gastrulation with mouth forming second
GO:0004930F:G protein-coupled receptor activity
GO:0005509F:calcium ion binding
GO:0005886C:plasma membrane
Cell Signaling
SRR941867_primary_scf7180002032104_1-1444
Len: 1,443 bp
Hits: 20
E-val: 3.80E-162
Sim: 82.14%
 XP_018938923.1 G-protein coupled receptor 55-like
GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway
GO:0035025P:positive regulation of Rho protein signal transduction
GO:0004930F:G protein-coupled receptor activity
GO:0005886C:plasma membrane
Cell Signaling
SRR941867_primary_scf7180002032818_1-1595
Len: 1,594 bp
Hits: 20
E-val: 2.70E-28
Sim: 60.74%
 XP_018954584.1 multivesicular body subunit 12A-like isoform X1
GO:0015031P:protein transport
GO:0019075P:virus maturation
GO:0032510P:endosome to lysosome transport via multivesicular body sorting pathway
GO:0032801P:receptor catabolic process
GO:0042058P:regulation of epidermal growth factor receptor signaling pathway
GO:0046755P:viral budding
GO:0017124F:SH3 domain binding
GO:0000813C:ESCRT I complex
GO:0005829C:cytosol
GO:0031902C:late endosome membrane
Cell Signaling
SRR941867_primary_scf7180002032842_1-3072
Len: 3,071 bp
Hits: 20
E-val: 8.30E-34
Sim: 97.03%
 XP_001923977.1probable glutamate receptor
GO:0034220P:monoatomic ion transmembrane transport
GO:0035235P:ionotropic glutamate receptor signaling pathway
GO:0035249P:synaptic transmission, glutamatergic
GO:0050804P:modulation of chemical synaptic transmission
GO:0060078P:regulation of postsynaptic membrane potential
GO:0004971F:AMPA glutamate receptor activity
GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential
GO:0032281C:AMPA glutamate receptor complex
GO:0043197C:dendritic spine
GO:0098839C:postsynaptic density membrane
Cell Signaling
SRR941867_primary_scf7180002033013_1-1696
Len: 1,695 bp
Hits: 20
E-val: 1.30E-41
Sim: 80.06%
 XP_018981733.1 insulin-like growth factor-binding protein 3 isoform X1
GO:0001501P:skeletal system development
GO:0006915P:apoptotic process
GO:0030514P:negative regulation of BMP signaling pathway
GO:0030916P:otic vesicle formation
GO:0043567P:regulation of insulin-like growth factor receptor signaling pathway
GO:0060037P:pharyngeal system development
GO:0001968F:fibronectin binding
GO:0031994F:insulin-like growth factor I binding
GO:0031995F:insulin-like growth factor II binding
GO:0005615C:extracellular space
GO:0005634C:nucleus
Cell Signaling
SRR941867_primary_scf7180002033113_1-3633
Len: 3,632 bp
Hits: 20
E-val: 1.20E-42
Sim: 62.16%
 XP_016431518.1 LOW QUALITY PROTEIN: plexin-D1
GO:0001569P:branching involved in blood vessel morphogenesis
GO:0002040P:sprouting angiogenesis
GO:0007162P:negative regulation of cell adhesion
GO:0007416P:synapse assembly
GO:0008360P:regulation of cell shape
GO:0030334P:regulation of cell migration
GO:0035476P:angioblast cell migration
GO:0043542P:endothelial cell migration
GO:0048048P:embryonic eye morphogenesis
GO:0050772P:positive regulation of axonogenesis
GO:0060854P:branching involved in lymph vessel morphogenesis
GO:0071526P:semaphorin-plexin signaling pathway
GO:0017154F:semaphorin receptor activity
GO:0002116C:semaphorin receptor complex
GO:0005886C:plasma membrane
Cell Signaling