Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002097487_1-383
Len: 382 bp
Hits: 20
E-val: 2.00E-14
Sim: 98.1%
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XP_008290435.1 nuclear receptor subfamily 5 group A member 2, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009755P:hormone-mediated signaling pathway GO:0030522P:intracellular receptor signaling pathway GO:0031017P:exocrine pancreas development GO:0035019P:somatic stem cell population maintenance GO:0048565P:digestive tract development GO:0051216P:cartilage development GO:0061017P:hepatoblast differentiation GO:2001051P:positive regulation of tendon cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0005515F:protein binding GO:0008270F:zinc ion binding GO:0090575C:RNA polymerase II transcription regulator complex |
Cell Signaling
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SRR941867_primary_scf7180002097647_1-1929
Len: 1,928 bp
Hits: 20
E-val: 2.60E-33
Sim: 95.06%
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XP_016397462.1 pappalysin-1-like |
GO:0006508P:proteolysis GO:0007166P:cell surface receptor signaling pathway GO:0043009P:chordate embryonic development GO:0004222F:metalloendopeptidase activity GO:0005615C:extracellular space |
Cell Signaling
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SRR941867_primary_scf7180002098076_1-1337
Len: 1,336 bp
Hits: 20
E-val: 5.30E-78
Sim: 79.12%
|
RXN11017.1cryptochrome-1-like isoform X2 |
GO:0032922P:circadian regulation of gene expression GO:0043153P:entrainment of circadian clock by photoperiod GO:0045892P:negative regulation of DNA-templated transcription GO:0046654P:tetrahydrofolate biosynthetic process GO:0003677F:DNA binding GO:0004146F:dihydrofolate reductase activity GO:0009881F:photoreceptor activity GO:0071949F:FAD binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Cell Signaling
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SRR941867_primary_scf7180002098357_1-1288
Len: 1,287 bp
Hits: 20
E-val: 5.80E-21
Sim: 75.97%
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XP_016109861.1 low-density lipoprotein receptor-related protein 1-like |
GO:0006898P:receptor-mediated endocytosis GO:0005041F:low-density lipoprotein particle receptor activity GO:0005509F:calcium ion binding GO:0042562F:hormone binding GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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SRR941867_primary_scf7180002098571_1326-1693
Len: 367 bp
Hits: 20
E-val: 6.90E-12
Sim: 99.23%
|
XP_026136765.1TSC22 domain family protein 3-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0009953P:dorsal/ventral pattern formation GO:0030513P:positive regulation of BMP signaling pathway GO:0070236P:negative regulation of activation-induced cell death of T cells GO:0005634C:nucleus GO:0005737C:cytoplasm |
Cell Signaling
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SRR941867_primary_scf7180002098784_1-2082
Len: 2,081 bp
Hits: 20
E-val: 2.30E-27
Sim: 95.17%
|
XP_028824514.1gamma-aminobutyric acid receptor subunit alpha-3 |
GO:1902476P:chloride transmembrane transport GO:0004890F:GABA-A receptor activity GO:0005230F:extracellular ligand-gated monoatomic ion channel activity GO:0005254F:chloride channel activity GO:0034707C:chloride channel complex GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR941867_primary_scf7180002098978_1-672
Len: 671 bp
Hits: 20
E-val: 6.30E-27
Sim: 66.95%
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XP_016121646.1 40S ribosomal protein SA-like, partial |
GO:0000028P:ribosomal small subunit assembly GO:0002181P:cytoplasmic translation GO:0006364P:rRNA processing GO:0007155P:cell adhesion GO:0048536P:spleen development GO:0003735F:structural constituent of ribosome GO:0005055F:laminin receptor activity GO:0043236F:laminin binding GO:0005634C:nucleus GO:0005886C:plasma membrane GO:0022627C:cytosolic small ribosomal subunit |
Cell Signaling
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SRR941867_primary_scf7180002099516_485-1318
Len: 833 bp
Hits: 20
E-val: 1.70E-154
Sim: 90.45%
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XP_016133583.1 ubiquitin thioesterase zranb1-B |
GO:0007010P:cytoskeleton organization GO:0007420P:brain development GO:0016477P:cell migration GO:0021551P:central nervous system morphogenesis GO:0022604P:regulation of cell morphogenesis GO:0030177P:positive regulation of Wnt signaling pathway GO:0035523P:protein K29-linked deubiquitination GO:0070536P:protein K63-linked deubiquitination GO:0071947P:protein deubiquitination involved in ubiquitin-dependent protein catabolic process GO:1990168P:protein K33-linked deubiquitination GO:0004843F:cysteine-type deubiquitinase activity GO:0008270F:zinc ion binding GO:0070530F:K63-linked polyubiquitin modification-dependent protein binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Cell Signaling
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SRR941867_primary_scf7180002099938_144-673
Len: 529 bp
Hits: 20
E-val: 1.30E-48
Sim: 74.13%
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BAD88978.1T cell antigen receptor alpha chain VJC region, partial |
GO:0002250P:adaptive immune response GO:0042101C:T cell receptor complex |
Cell Signaling
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SRR941867_primary_scf7180002100079_280-993
Len: 713 bp
Hits: 20
E-val: 5.50E-74
Sim: 70.49%
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XP_018952840.1 gonadotropin subunit beta-2 isoform X1 |
GO:0010628P:positive regulation of gene expression GO:2000836P:positive regulation of androgen secretion GO:2000866P:positive regulation of estradiol secretion GO:0031762F:follicle-stimulating hormone receptor binding GO:0031775F:lutropin-choriogonadotropic hormone receptor binding GO:0046982F:protein heterodimerization activity GO:0005576C:extracellular region |
Cell Signaling
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SRR941867_primary_scf7180002100167_274-1338
Len: 1,064 bp
Hits: 20
E-val: 1.00E-193
Sim: 89.88%
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XP_018976143.1 C-C chemokine receptor type 6-like |
GO:0006955P:immune response GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0019722P:calcium-mediated signaling GO:0060326P:cell chemotaxis GO:0070098P:chemokine-mediated signaling pathway GO:1902600P:proton transmembrane transport GO:0016493F:C-C chemokine receptor activity GO:0019957F:C-C chemokine binding GO:0046961F:proton-transporting ATPase activity, rotational mechanism GO:0000221C:vacuolar proton-transporting V-type ATPase, V1 domain GO:0005765C:lysosomal membrane GO:0009897C:external side of plasma membrane |
Cell Signaling
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SRR941867_primary_scf7180002100421_239-1267
Len: 1,028 bp
Hits: 20
E-val: 1.50E-189
Sim: 88.03%
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BAA31470.1CXC chemokine receptor-2 |
GO:0006955P:immune response GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0019722P:calcium-mediated signaling GO:0030593P:neutrophil chemotaxis GO:0032259P:methylation GO:0070098P:chemokine-mediated signaling pathway GO:0003676F:nucleic acid binding GO:0008168F:methyltransferase activity GO:0016493F:C-C chemokine receptor activity GO:0016494F:C-X-C chemokine receptor activity GO:0019957F:C-C chemokine binding GO:0009897C:external side of plasma membrane |
Cell Signaling
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SRR941867_primary_scf7180002100740_1-793
Len: 792 bp
Hits: 20
E-val: 1.00E-23
Sim: 93.1%
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ROL23580.1Semaphorin-3ab |
GO:0001569P:branching involved in blood vessel morphogenesis GO:0001755P:neural crest cell migration GO:0008045P:motor neuron axon guidance GO:0030335P:positive regulation of cell migration GO:0048755P:branching morphogenesis of a nerve GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0038191F:neuropilin binding GO:0045499F:chemorepellent activity GO:0005615C:extracellular space GO:0005886C:plasma membrane GO:0030424C:axon GO:0098978C:glutamatergic synapse |
Cell Signaling
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SRR941867_primary_scf7180002100984_1-1659
Len: 1,658 bp
Hits: 20
E-val: 3.70E-44
Sim: 54.86%
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XP_026137520.1roundabout homolog 1-like isoform X4 |
GO:0007411P:axon guidance GO:0016199P:axon midline choice point recognition GO:0035385P:Roundabout signaling pathway GO:0008046F:axon guidance receptor activity |
Cell Signaling
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SRR941867_primary_scf7180002101395_1-868
Len: 867 bp
Hits: 20
E-val: 2.40E-31
Sim: 99.31%
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ROL50541.1MAM domain-containing glycosylphosphatidylinositol anchor protein 2 |
GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0050808P:synapse organization GO:0008046F:axon guidance receptor activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0043025C:neuronal cell body |
Cell Signaling
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SRR941867_primary_scf7180002101480_1-718
Len: 717 bp
Hits: 20
E-val: 2.10E-44
Sim: 98.9%
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XP_018953278.1 glutamate receptor ionotropic, delta-1-like |
GO:0034220P:monoatomic ion transmembrane transport GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0035249P:synaptic transmission, glutamatergic GO:0050804P:modulation of chemical synaptic transmission GO:0060078P:regulation of postsynaptic membrane potential GO:0004971F:AMPA glutamate receptor activity GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:0032281C:AMPA glutamate receptor complex GO:0043197C:dendritic spine GO:0098839C:postsynaptic density membrane |
Cell Signaling
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SRR941867_primary_scf7180002102331_1-1428
Len: 1,427 bp
Hits: 20
E-val: 1.70E-18
Sim: 81.32%
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XP_024262002.1LOW QUALITY PROTEIN: bone morphogenetic protein receptor type-2-like |
GO:0001944P:vasculature development GO:0030509P:BMP signaling pathway GO:0032924P:activin receptor signaling pathway GO:0005025F:transforming growth factor beta receptor activity, type I GO:0005026F:transforming growth factor beta receptor activity, type II GO:0005524F:ATP binding GO:0016361F:activin receptor activity, type I GO:0016362F:activin receptor activity, type II GO:0070123F:transforming growth factor beta receptor activity, type III GO:0098821F:BMP receptor activity GO:0005886C:plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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SRR941867_primary_scf7180002102408_736-1755
Len: 1,019 bp
Hits: 20
E-val: 4.50E-186
Sim: 98.28%
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XP_018962406.1 neuropeptides B/W receptor type 2-like |
GO:0007218P:neuropeptide signaling pathway GO:0008188F:neuropeptide receptor activity GO:0042923F:neuropeptide binding GO:0005886C:plasma membrane GO:0043005C:neuron projection |
Cell Signaling
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SRR941867_primary_scf7180002102457_777-2281
Len: 1,504 bp
Hits: 20
E-val: 2.60E-105
Sim: 94.88%
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XP_018933403.1 atrial natriuretic peptide receptor 3 isoform X1 |
GO:0007165P:signal transduction GO:0060038P:cardiac muscle cell proliferation GO:0016941F:natriuretic peptide receptor activity GO:0017046F:peptide hormone binding GO:0016020C:membrane |
Cell Signaling
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SRR941867_primary_scf7180002102809_1-898
Len: 897 bp
Hits: 17
E-val: 8.30E-51
Sim: 77.24%
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XP_026135283.1MRN complex-interacting protein isoform X3 |
GO:0007035P:vacuolar acidification GO:0007095P:mitotic G2 DNA damage checkpoint signaling GO:0010604P:positive regulation of macromolecule metabolic process GO:1902600P:proton transmembrane transport GO:2000779P:regulation of double-strand break repair GO:0003682F:chromatin binding GO:0046961F:proton-transporting ATPase activity, rotational mechanism GO:0051117F:ATPase binding GO:0005634C:nucleus GO:0005886C:plasma membrane GO:0016471C:vacuolar proton-transporting V-type ATPase complex GO:0033179C:proton-transporting V-type ATPase, V0 domain |
Cell Signaling
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SRR941867_primary_scf7180002102887_1-1861
Len: 1,860 bp
Hits: 20
E-val: 1.40E-12
Sim: 88.55%
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ROL28049.1SH3 and multiple ankyrin repeat domains protein 1 |
GO:0030160F:synaptic receptor adaptor activity GO:0035255F:ionotropic glutamate receptor binding GO:0014069C:postsynaptic density GO:0043197C:dendritic spine GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR941867_primary_scf7180002102896_819-1838
Len: 1,019 bp
Hits: 20
E-val: 1.70E-36
Sim: 73.97%
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XP_018944829.1 protein shisa-7-like |
GO:0007214P:gamma-aminobutyric acid signaling pathway GO:0097112P:gamma-aminobutyric acid receptor clustering GO:0050811F:GABA receptor binding GO:0014069C:postsynaptic density GO:0032591C:dendritic spine membrane GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR941867_primary_scf7180002103942_478-1576
Len: 1,098 bp
Hits: 20
E-val: 7.10E-44
Sim: 68.32%
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XP_018945630.1 interferon-induced GTP-binding protein Mx-like |
GO:0016185P:synaptic vesicle budding from presynaptic endocytic zone membrane GO:0031623P:receptor internalization GO:0051607P:defense response to virus GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0008017F:microtubule binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005874C:microtubule GO:0005886C:plasma membrane GO:0098793C:presynapse |
Cell Signaling
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SRR941867_primary_scf7180002104792_1-1222
Len: 1,221 bp
Hits: 20
E-val: 1.20E-39
Sim: 82.48%
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XP_018968895.1 utrophin-like |
GO:0099536P:synaptic signaling GO:0003779F:actin binding GO:0008270F:zinc ion binding GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0016010C:dystrophin-associated glycoprotein complex GO:0042383C:sarcolemma GO:0045202C:synapse |
Cell Signaling
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SRR941867_primary_scf7180002104806_1-676
Len: 675 bp
Hits: 20
E-val: 3.90E-45
Sim: 90.6%
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XP_018978151.1 protein jagged-1b-like |
GO:0007219P:Notch signaling pathway GO:0030154P:cell differentiation GO:0048513P:animal organ development GO:0048731P:system development GO:0005112F:Notch binding GO:0005509F:calcium ion binding GO:0016020C:membrane |
Cell Signaling
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