Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002026115_1-2304
Len: 2,303 bp
Hits: 20
E-val: 1.30E-52
Sim: 96.89%
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RXN15709.1transforming growth factor beta-2 |
GO:0007179P:transforming growth factor beta receptor signaling pathway GO:0009653P:anatomical structure morphogenesis GO:0042127P:regulation of cell population proliferation GO:0051781P:positive regulation of cell division GO:0060021P:roof of mouth development GO:0061056P:sclerotome development GO:0005125F:cytokine activity GO:0005160F:transforming growth factor beta receptor binding GO:0008083F:growth factor activity GO:0005615C:extracellular space |
Cell Signaling
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SRR953582_primary_scf7180002026797_1-1612
Len: 1,611 bp
Hits: 20
E-val: 3.40E-26
Sim: 91.42%
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XP_016340244.1 agrin isoform X1 |
GO:0030154P:cell differentiation GO:0043113P:receptor clustering GO:0005509F:calcium ion binding GO:0043236F:laminin binding GO:0005576C:extracellular region GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002027642_1-1567
Len: 1,566 bp
Hits: 20
E-val: 1.60E-110
Sim: 97.92%
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XP_018966830.1 glutamate receptor ionotropic, NMDA 2A-like |
GO:0034220P:monoatomic ion transmembrane transport GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0004972F:NMDA glutamate receptor activity GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR953582_primary_scf7180002027860_448-2445
Len: 1,997 bp
Hits: 20
E-val: 4.00E-61
Sim: 71.06%
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XP_016099050.1 ras-related GTP-binding protein C-like |
GO:0009267P:cellular response to starvation GO:0010507P:negative regulation of autophagy GO:1904263P:positive regulation of TORC1 signaling GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0005634C:nucleus GO:0005764C:lysosome GO:1990131C:Gtr1-Gtr2 GTPase complex |
Cell Signaling
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SRR953582_primary_scf7180002028679_1-1022
Len: 1,021 bp
Hits: 20
E-val: 4.70E-42
Sim: 95.87%
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XP_018941142.1 nuclear receptor subfamily 4 group A member 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006954P:inflammatory response GO:0010906P:regulation of glucose metabolic process GO:0030522P:intracellular receptor signaling pathway GO:0071376P:cellular response to corticotropin-releasing hormone stimulus GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0035259F:nuclear glucocorticoid receptor binding GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005829C:cytosol |
Cell Signaling
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SRR953582_primary_scf7180002028834_1-1587
Len: 1,586 bp
Hits: 20
E-val: 1.20E-23
Sim: 85.61%
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XP_018966771.1 metalloprotease TIKI1-like |
GO:0006508P:proteolysis GO:0030178P:negative regulation of Wnt signaling pathway GO:0004222F:metalloendopeptidase activity GO:0046872F:metal ion binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002028893_33-1537
Len: 1,504 bp
Hits: 20
E-val: 2.80E-27
Sim: 51.69%
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XP_016115499.1 gamma-aminobutyric acid receptor subunit rho-1-like |
GO:0006821P:chloride transport GO:0034220P:monoatomic ion transmembrane transport GO:1902476P:chloride transmembrane transport GO:0004888F:transmembrane signaling receptor activity GO:0005230F:extracellular ligand-gated monoatomic ion channel activity GO:0005254F:chloride channel activity GO:0005886C:plasma membrane GO:0016020C:membrane GO:0034707C:chloride channel complex |
Cell Signaling
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SRR953582_primary_scf7180002028926_762-1562
Len: 800 bp
Hits: 20
E-val: 4.50E-149
Sim: 92.48%
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XP_018941142.1 nuclear receptor subfamily 4 group A member 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006954P:inflammatory response GO:0010906P:regulation of glucose metabolic process GO:0030522P:intracellular receptor signaling pathway GO:0071376P:cellular response to corticotropin-releasing hormone stimulus GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0035259F:nuclear glucocorticoid receptor binding GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005829C:cytosol |
Cell Signaling
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SRR953582_primary_scf7180002029083_1-2136
Len: 2,135 bp
Hits: 20
E-val: 4.10E-32
Sim: 68.08%
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CDR00892.1unnamed protein product |
GO:0006355P:regulation of DNA-templated transcription GO:0030522P:intracellular receptor signaling pathway GO:0032870P:cellular response to hormone stimulus GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0110165C:cellular anatomical structure |
Cell Signaling
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SRR953582_primary_scf7180002029117_1-2845
Len: 2,844 bp
Hits: 20
E-val: 8.40E-89
Sim: 73.94%
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RXN26901.1low-density lipo receptor-related 1-like protein |
GO:0006898P:receptor-mediated endocytosis GO:0006909P:phagocytosis GO:0150093P:amyloid-beta clearance by transcytosis GO:0150094P:amyloid-beta clearance by cellular catabolic process GO:1901342P:regulation of vasculature development GO:0034185F:apolipoprotein binding GO:0038024F:cargo receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002029224_1-2791
Len: 2,790 bp
Hits: 20
E-val: 4.90E-25
Sim: 74.9%
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XP_026081825.1TNF receptor-associated factor 4-like |
GO:0002072P:optic cup morphogenesis involved in camera-type eye development GO:0003405P:optic vesicle elongation GO:0007166P:cell surface receptor signaling pathway GO:0042981P:regulation of apoptotic process GO:0043122P:regulation of canonical NF-kappaB signal transduction GO:0045198P:establishment of epithelial cell apical/basal polarity GO:0046330P:positive regulation of JNK cascade GO:0005164F:tumor necrosis factor receptor binding GO:0008270F:zinc ion binding GO:0031625F:ubiquitin protein ligase binding GO:0035591F:signaling adaptor activity GO:0005737C:cytoplasm |
Cell Signaling
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SRR953582_primary_scf7180002029519_911-1348
Len: 437 bp
Hits: 20
E-val: 2.70E-31
Sim: 73.73%
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XP_026111790.1plexin-A1-like |
GO:0002040P:sprouting angiogenesis GO:0007416P:synapse assembly GO:0030334P:regulation of cell migration GO:0042060P:wound healing GO:0071526P:semaphorin-plexin signaling pathway GO:0097485P:neuron projection guidance GO:0017154F:semaphorin receptor activity GO:0002116C:semaphorin receptor complex GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002030050_1-1027
Len: 1,026 bp
Hits: 20
E-val: 1.60E-66
Sim: 89.59%
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XP_018942885.1 relaxin-3 receptor 1-like |
GO:0006325P:chromatin organization GO:0006355P:regulation of DNA-templated transcription GO:0006955P:immune response GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0019722P:calcium-mediated signaling GO:0060326P:cell chemotaxis GO:0070098P:chemokine-mediated signaling pathway GO:0016493F:C-C chemokine receptor activity GO:0019957F:C-C chemokine binding GO:0005634C:nucleus GO:0009897C:external side of plasma membrane GO:0035267C:NuA4 histone acetyltransferase complex |
Cell Signaling
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SRR953582_primary_scf7180002030162_1-1735
Len: 1,734 bp
Hits: 20
E-val: 3.70E-23
Sim: 96.98%
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XP_016091646.1 ATP-binding cassette sub-family C member 8-like |
GO:0006813P:potassium ion transport GO:0055085P:transmembrane transport GO:0071333P:cellular response to glucose stimulus GO:0005524F:ATP binding GO:0008281F:sulfonylurea receptor activity GO:0016887F:ATP hydrolysis activity GO:0140359F:ABC-type transporter activity GO:0005886C:plasma membrane GO:0032991C:protein-containing complex |
Cell Signaling
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SRR953582_primary_scf7180002030618_1385-1887
Len: 502 bp
Hits: 20
E-val: 1.70E-21
Sim: 93.93%
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XP_026100136.1transcription factor 7-like 1-B |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0048699P:generation of neurons GO:0060070P:canonical Wnt signaling pathway GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000785C:chromatin GO:1990907C:beta-catenin-TCF complex |
Cell Signaling
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SRR953582_primary_scf7180002031207_1-838
Len: 837 bp
Hits: 20
E-val: 2.00E-22
Sim: 99.12%
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XP_026134729.1brorin-like |
GO:0030514P:negative regulation of BMP signaling pathway GO:0030900P:forebrain development GO:0005615C:extracellular space GO:0032281C:AMPA glutamate receptor complex GO:0045202C:synapse |
Cell Signaling
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SRR953582_primary_scf7180002031324_1-1671
Len: 1,670 bp
Hits: 20
E-val: 4.50E-58
Sim: 52.39%
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CAF95732.1unnamed protein product, partial |
GO:0006281P:DNA repair GO:0039536P:negative regulation of RIG-I signaling pathway GO:0003677F:DNA binding GO:0004519F:endonuclease activity GO:0039552F:RIG-I binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005829C:cytosol |
Cell Signaling
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SRR953582_primary_scf7180002031382_1-699
Len: 698 bp
Hits: 20
E-val: 6.20E-54
Sim: 87.82%
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XP_018970207.1 D(2) dopamine receptor B-like |
GO:0001963P:synaptic transmission, dopaminergic GO:0007195P:adenylate cyclase-inhibiting dopamine receptor signaling pathway GO:0014059P:regulation of dopamine secretion GO:0043266P:regulation of potassium ion transport GO:0051481P:negative regulation of cytosolic calcium ion concentration GO:0051967P:negative regulation of synaptic transmission, glutamatergic GO:0060158P:phospholipase C-activating dopamine receptor signaling pathway GO:0071881P:adenylate cyclase-inhibiting adrenergic receptor signaling pathway GO:0001591F:dopamine neurotransmitter receptor activity, coupled via Gi/Go GO:0004938F:alpha2-adrenergic receptor activity GO:0042734C:presynaptic membrane GO:0098978C:glutamatergic synapse |
Cell Signaling
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SRR953582_primary_scf7180002031712_331-1164
Len: 833 bp
Hits: 20
E-val: 1.70E-154
Sim: 90.45%
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XP_016133583.1 ubiquitin thioesterase zranb1-B |
GO:0007010P:cytoskeleton organization GO:0007420P:brain development GO:0016477P:cell migration GO:0021551P:central nervous system morphogenesis GO:0022604P:regulation of cell morphogenesis GO:0030177P:positive regulation of Wnt signaling pathway GO:0035523P:protein K29-linked deubiquitination GO:0070536P:protein K63-linked deubiquitination GO:0071947P:protein deubiquitination involved in ubiquitin-dependent protein catabolic process GO:1990168P:protein K33-linked deubiquitination GO:0004843F:cysteine-type deubiquitinase activity GO:0008270F:zinc ion binding GO:0070530F:K63-linked polyubiquitin modification-dependent protein binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Cell Signaling
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SRR953582_primary_scf7180002031878_1-1979
Len: 1,978 bp
Hits: 20
E-val: 5.60E-15
Sim: 64.54%
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XP_016146394.1 integrin alpha-5-like |
GO:0001706P:endoderm formation GO:0002042P:cell migration involved in sprouting angiogenesis GO:0007160P:cell-matrix adhesion GO:0007229P:integrin-mediated signaling pathway GO:0030325P:adrenal gland development GO:0032525P:somite rostral/caudal axis specification GO:0033627P:cell adhesion mediated by integrin GO:0048703P:embryonic viscerocranium morphogenesis GO:0051216P:cartilage development GO:0060037P:pharyngeal system development GO:0060956P:endocardial cell differentiation GO:0070309P:lens fiber cell morphogenesis GO:0085029P:extracellular matrix assembly GO:0090245P:axis elongation involved in somitogenesis GO:0098609P:cell-cell adhesion GO:0001968F:fibronectin binding GO:0005178F:integrin binding GO:0046982F:protein heterodimerization activity GO:0008305C:integrin complex GO:0009897C:external side of plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002031895_1-645
Len: 644 bp
Hits: 20
E-val: 7.70E-83
Sim: 92.34%
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XP_018934781.1 semaphorin-3G-like |
GO:0001755P:neural crest cell migration GO:0007411P:axon guidance GO:0030335P:positive regulation of cell migration GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0045499F:chemorepellent activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002032293_359-1598
Len: 1,239 bp
Hits: 20
E-val: 4.30E-21
Sim: 68.25%
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XP_021415948.1endothelin-2-like |
GO:0003100P:regulation of systemic arterial blood pressure by endothelin GO:0006874P:intracellular calcium ion homeostasis GO:0007165P:signal transduction GO:0014826P:vein smooth muscle contraction GO:0019229P:regulation of vasoconstriction GO:0045987P:positive regulation of smooth muscle contraction GO:0005179F:hormone activity GO:0031708F:endothelin B receptor binding GO:0005615C:extracellular space |
Cell Signaling
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SRR953582_primary_scf7180002033014_1-2473
Len: 2,472 bp
Hits: 20
E-val: 1.30E-93
Sim: 97.17%
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XP_018934797.1 LOW QUALITY PROTEIN: pappalysin-1-like |
GO:0006508P:proteolysis GO:0007166P:cell surface receptor signaling pathway GO:0043009P:chordate embryonic development GO:0004222F:metalloendopeptidase activity GO:0005615C:extracellular space |
Cell Signaling
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SRR953582_primary_scf7180002033077_437-2053
Len: 1,616 bp
Hits: 20
E-val: 1.80E-11
Sim: 81%
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CDQ93823.1unnamed protein product |
GO:0006915P:apoptotic process GO:0007411P:axon guidance GO:0038007P:netrin-activated signaling pathway GO:0005042F:netrin receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002033105_77-1007
Len: 930 bp
Hits: 20
E-val: 1.80E-27
Sim: 69.35%
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XP_018920149.1 presenilin-2 |
GO:0001964P:startle response GO:0006509P:membrane protein ectodomain proteolysis GO:0007219P:Notch signaling pathway GO:0007420P:brain development GO:0010506P:regulation of autophagy GO:0016485P:protein processing GO:0019896P:axonal transport of mitochondrion GO:0022008P:neurogenesis GO:0030318P:melanocyte differentiation GO:0034205P:amyloid-beta formation GO:0055074P:calcium ion homeostasis GO:0061053P:somite development GO:0042500F:aspartic endopeptidase activity, intramembrane cleaving GO:0000139C:Golgi membrane GO:0005789C:endoplasmic reticulum membrane GO:0070765C:gamma-secretase complex GO:1904115C:axon cytoplasm |
Cell Signaling
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