Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002231887_1-941
Len: 940 bp
Hits: 20
E-val: 5.20E-19
Sim: 96.21%
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XP_016097814.1 SH3 domain-binding protein 2-like |
GO:0006898P:receptor-mediated endocytosis GO:0007165P:signal transduction GO:0005509F:calcium ion binding GO:0017124F:SH3 domain binding GO:0042562F:hormone binding GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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SRR953582_primary_scf7180002232953_789-1150
Len: 361 bp
Hits: 20
E-val: 2.20E-39
Sim: 97.92%
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RXN20722.1estrogen-related receptor gamma isoform X5 |
GO:0006355P:regulation of DNA-templated transcription GO:0030518P:nuclear receptor-mediated steroid hormone signaling pathway GO:0003707F:nuclear steroid receptor activity GO:0005496F:steroid binding GO:0008270F:zinc ion binding GO:0042562F:hormone binding GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Cell Signaling
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SRR953582_primary_scf7180002234781_1-804
Len: 803 bp
Hits: 20
E-val: 2.90E-47
Sim: 96.25%
|
XP_021330055.1glutamate receptor ionotropic, delta-1-like |
GO:0034220P:monoatomic ion transmembrane transport GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0035249P:synaptic transmission, glutamatergic GO:0050804P:modulation of chemical synaptic transmission GO:0060078P:regulation of postsynaptic membrane potential GO:0004971F:AMPA glutamate receptor activity GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:0032281C:AMPA glutamate receptor complex GO:0043197C:dendritic spine GO:0098839C:postsynaptic density membrane |
Cell Signaling
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SRR953582_primary_scf7180002235140_1-1838
Len: 1,837 bp
Hits: 20
E-val: 1.10E-52
Sim: 87.57%
|
XP_018978082.1 LOW QUALITY PROTEIN: kielin/chordin-like protein |
GO:0030513P:positive regulation of BMP signaling pathway GO:0005576C:extracellular region |
Cell Signaling
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SRR953582_primary_scf7180002235806_1-860
Len: 859 bp
Hits: 20
E-val: 3.30E-105
Sim: 93.16%
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XP_018938524.1 LOW QUALITY PROTEIN: alpha-1D adrenergic receptor-like |
GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0007267P:cell-cell signaling GO:0043410P:positive regulation of MAPK cascade GO:0045907P:positive regulation of vasoconstriction GO:0071880P:adenylate cyclase-activating adrenergic receptor signaling pathway GO:0071881P:adenylate cyclase-inhibiting adrenergic receptor signaling pathway GO:0004937F:alpha1-adrenergic receptor activity GO:0004938F:alpha2-adrenergic receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002237093_1-510
Len: 509 bp
Hits: 20
E-val: 2.70E-14
Sim: 98.1%
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XP_008290435.1 nuclear receptor subfamily 5 group A member 2, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009755P:hormone-mediated signaling pathway GO:0030522P:intracellular receptor signaling pathway GO:0031017P:exocrine pancreas development GO:0035019P:somatic stem cell population maintenance GO:0048565P:digestive tract development GO:0051216P:cartilage development GO:0061017P:hepatoblast differentiation GO:2001051P:positive regulation of tendon cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0005515F:protein binding GO:0008270F:zinc ion binding GO:0090575C:RNA polymerase II transcription regulator complex |
Cell Signaling
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SRR953582_primary_scf7180002239255_1-1186
Len: 1,185 bp
Hits: 20
E-val: 1.40E-18
Sim: 93.25%
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XP_018975066.1 sorting nexin-5-like |
GO:0006907P:pinocytosis GO:0007219P:Notch signaling pathway GO:0015031P:protein transport GO:0030097P:hemopoiesis GO:0042063P:gliogenesis GO:0042147P:retrograde transport, endosome to Golgi GO:0048514P:blood vessel morphogenesis GO:0060041P:retina development in camera-type eye GO:0034452F:dynactin binding GO:0035091F:phosphatidylinositol binding GO:0005769C:early endosome GO:0005789C:endoplasmic reticulum membrane GO:0005829C:cytosol |
Cell Signaling
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SRR953582_primary_scf7180002240439_1-716
Len: 715 bp
Hits: 20
E-val: 2.40E-32
Sim: 74.71%
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XP_018969506.1 cadherin-23-like |
GO:0006897P:endocytosis GO:0007156P:homophilic cell-cell adhesion GO:0016477P:cell migration GO:0035678P:neuromast hair cell morphogenesis GO:0050910P:detection of mechanical stimulus involved in sensory perception of sound GO:0050957P:equilibrioception GO:0060117P:auditory receptor cell development GO:0060122P:inner ear receptor cell stereocilium organization GO:0061512P:protein localization to cilium GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0022857F:transmembrane transporter activity GO:0045296F:cadherin binding GO:0005911C:cell-cell junction GO:0005929C:cilium GO:0016342C:catenin complex |
Cell Signaling
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SRR953582_primary_scf7180002242552_364-878
Len: 514 bp
Hits: 20
E-val: 1.10E-15
Sim: 89.33%
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XP_018972203.1 laminin subunit alpha-3-like isoform X1 |
GO:0007411P:axon guidance GO:0009887P:animal organ morphogenesis GO:0009888P:tissue development GO:0030155P:regulation of cell adhesion GO:0030334P:regulation of cell migration GO:0034446P:substrate adhesion-dependent cell spreading GO:0045995P:regulation of embryonic development GO:0070831P:basement membrane assembly GO:0005102F:signaling receptor binding GO:0005576C:extracellular region GO:0043256C:laminin complex |
Cell Signaling
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SRR953582_primary_scf7180002243028_1-1135
Len: 1,134 bp
Hits: 20
E-val: 1.10E-26
Sim: 95.24%
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XP_016402364.1 ras-related protein Rab-27A isoform X1 |
GO:0006887P:exocytosis GO:0032456P:endocytic recycling GO:0060271P:cilium assembly GO:0098969P:neurotransmitter receptor transport to postsynaptic membrane GO:0003925F:G protein activity GO:0005525F:GTP binding GO:0005770C:late endosome GO:0005886C:plasma membrane GO:0008021C:synaptic vesicle GO:0030140C:trans-Golgi network transport vesicle |
Cell Signaling
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SRR953582_primary_scf7180002244102_1-1314
Len: 1,313 bp
Hits: 4
E-val: 2.10E-10
Sim: 58.7%
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XP_016107031.1 reversion-inducing cysteine-rich protein with Kazal motifs-like |
GO:0051726P:regulation of cell cycle GO:0060828P:regulation of canonical Wnt signaling pathway GO:0090049P:regulation of cell migration involved in sprouting angiogenesis GO:1990791P:dorsal root ganglion development GO:0004866F:endopeptidase inhibitor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002244273_1-1630
Len: 1,629 bp
Hits: 20
E-val: 3.30E-21
Sim: 86.13%
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XP_016400057.1 semaphorin-4A-like isoform X1 |
GO:0001755P:neural crest cell migration GO:0007411P:axon guidance GO:0030335P:positive regulation of cell migration GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0038191F:neuropilin binding GO:0045499F:chemorepellent activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002244802_269-1023
Len: 754 bp
Hits: 20
E-val: 3.60E-39
Sim: 50.81%
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RXN21316.1DEP domain-containing 5-like isoform X2 |
GO:0010508P:positive regulation of autophagy GO:0016192P:vesicle-mediated transport GO:0034198P:cellular response to amino acid starvation GO:0035556P:intracellular signal transduction GO:1904262P:negative regulation of TORC1 signaling GO:0003924F:GTPase activity GO:0005096F:GTPase activator activity GO:0005525F:GTP binding GO:0005765C:lysosomal membrane GO:1990130C:GATOR1 complex |
Cell Signaling
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SRR953582_primary_scf7180002247945_1-600
Len: 599 bp
Hits: 20
E-val: 7.00E-30
Sim: 98.48%
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RXN04240.1cadherin-4-like isoform X2 |
GO:0000902P:cell morphogenesis GO:0002009P:morphogenesis of an epithelium GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0021545P:cranial nerve development GO:0034332P:adherens junction organization GO:0042478P:regulation of eye photoreceptor cell development GO:0044331P:cell-cell adhesion mediated by cadherin GO:0048925P:lateral line system development GO:0060042P:retina morphogenesis in camera-type eye GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005912C:adherens junction GO:0016342C:catenin complex |
Cell Signaling
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SRR953582_primary_scf7180002247983_1-886
Len: 885 bp
Hits: 20
E-val: 1.50E-20
Sim: 91.17%
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XP_016380708.1 inositol 1,4,5-trisphosphate receptor type 1-like |
GO:0019722P:calcium-mediated signaling GO:0051209P:release of sequestered calcium ion into cytosol GO:0005220F:inositol 1,4,5-trisphosphate-gated calcium channel activity GO:0070679F:inositol 1,4,5 trisphosphate binding GO:0005789C:endoplasmic reticulum membrane GO:0030658C:transport vesicle membrane |
Cell Signaling
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SRR953582_primary_scf7180002249150_1-741
Len: 740 bp
Hits: 20
E-val: 6.00E-23
Sim: 98.73%
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XP_016334105.1 thyroid hormone receptor beta-like, partial |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0002154P:thyroid hormone receptor signaling pathway GO:0042671P:retinal cone cell fate determination GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0046549P:retinal cone cell development GO:0048384P:retinoic acid receptor signaling pathway GO:0048839P:inner ear development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0005515F:protein binding GO:0008270F:zinc ion binding GO:0070324F:thyroid hormone binding GO:0090575C:RNA polymerase II transcription regulator complex |
Cell Signaling
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SRR953582_primary_scf7180002249343_1-721
Len: 720 bp
Hits: 20
E-val: 3.80E-62
Sim: 66.71%
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XP_018977242.1 low-density lipoprotein receptor-related protein 2-like |
GO:0003094P:glomerular filtration GO:0007507P:heart development GO:0048259P:regulation of receptor-mediated endocytosis GO:0070293P:renal absorption GO:0005488F:binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002250065_206-1109
Len: 903 bp
Hits: 20
E-val: 1.30E-30
Sim: 99.25%
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XP_018975463.1 LOW QUALITY PROTEIN: phosphatase and actin regulator 4B-like |
GO:0001755P:neural crest cell migration GO:0001843P:neural tube closure GO:0007266P:Rho protein signal transduction GO:0030036P:actin cytoskeleton organization GO:0048484P:enteric nervous system development GO:0051726P:regulation of cell cycle GO:0061386P:closure of optic fissure GO:2001045P:negative regulation of integrin-mediated signaling pathway GO:0003779F:actin binding GO:0008157F:protein phosphatase 1 binding GO:0072542F:protein phosphatase activator activity GO:0005737C:cytoplasm GO:0030027C:lamellipodium |
Cell Signaling
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SRR953582_primary_scf7180002250148_1-816
Len: 815 bp
Hits: 20
E-val: 2.40E-28
Sim: 100%
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XP_026077011.1adiponectin receptor protein 1-like |
GO:0033211P:adiponectin-activated signaling pathway GO:0038023F:signaling receptor activity GO:0046872F:metal ion binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002250459_1-1202
Len: 1,201 bp
Hits: 20
E-val: 2.20E-14
Sim: 86.09%
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XP_018924905.1 LOW QUALITY PROTEIN: G patch domain-containing protein 3 |
GO:0032480P:negative regulation of type I interferon production GO:0039536P:negative regulation of RIG-I signaling pathway GO:0045893P:positive regulation of DNA-templated transcription GO:0046856P:phosphatidylinositol dephosphorylation GO:0003676F:nucleic acid binding GO:0043812F:phosphatidylinositol-4-phosphate phosphatase activity GO:0005783C:endoplasmic reticulum GO:0016020C:membrane |
Cell Signaling
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SRR953582_primary_scf7180002251803_294-992
Len: 698 bp
Hits: 20
E-val: 9.60E-79
Sim: 86.91%
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XP_016101968.1 retinitis pigmentosa 1-like 1 protein isoform X1 |
GO:0035082P:axoneme assembly GO:0035556P:intracellular signal transduction GO:0042461P:photoreceptor cell development GO:0060041P:retina development in camera-type eye GO:0005930C:axoneme |
Cell Signaling
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SRR953582_primary_scf7180002253129_267-969
Len: 702 bp
Hits: 20
E-val: 1.50E-79
Sim: 86.76%
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XP_018920515.1 caspase-8-like |
GO:0006508P:proteolysis GO:0043525P:positive regulation of neuron apoptotic process GO:0051604P:protein maturation GO:0004197F:cysteine-type endopeptidase activity GO:0005737C:cytoplasm GO:0031265C:CD95 death-inducing signaling complex |
Cell Signaling
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SRR953582_primary_scf7180002253432_1-542
Len: 541 bp
Hits: 20
E-val: 6.00E-28
Sim: 94.21%
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XP_016411021.1 basement membrane-specific heparan sulfate proteoglycan core protein-like |
GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0050808P:synapse organization GO:0070593P:dendrite self-avoidance GO:0008046F:axon guidance receptor activity GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0043025C:neuronal cell body |
Cell Signaling
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SRR953582_primary_scf7180002256011_209-1097
Len: 888 bp
Hits: 20
E-val: 8.90E-13
Sim: 99.09%
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XP_016091027.1 kinesin-like protein KIF3A isoform X1 |
GO:0007018P:microtubule-based movement GO:0007219P:Notch signaling pathway GO:0035845P:photoreceptor cell outer segment organization GO:0045494P:photoreceptor cell maintenance GO:0046907P:intracellular transport GO:0060271P:cilium assembly GO:0003777F:microtubule motor activity GO:0005524F:ATP binding GO:0008017F:microtubule binding GO:0005871C:kinesin complex GO:0005874C:microtubule |
Cell Signaling
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SRR953582_primary_scf7180002257582_1-1450
Len: 1,449 bp
Hits: 20
E-val: 1.80E-31
Sim: 69.39%
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XP_018930256.1 sorting nexin-16-like isoform X1 |
GO:0001881P:receptor recycling GO:0006622P:protein targeting to lysosome GO:0008333P:endosome to lysosome transport GO:0045022P:early endosome to late endosome transport GO:0035091F:phosphatidylinositol binding GO:0042802F:identical protein binding GO:0005764C:lysosome GO:0031901C:early endosome membrane GO:0031902C:late endosome membrane |
Cell Signaling
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