Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924327_primary_scf7180002221284_4104-8050
Len: 3,946 bp
Hits: 20
E-val: 2.10E-183
Sim: 70.71%
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RXN14231.1Retrovirus-related Pol polyprotein from transposon 297 |
DNA Metabolism
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SRR924327_primary_scf7180002221384_814-3378
Len: 2,564 bp
Hits: 20
E-val: 0
Sim: 70.58%
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RXN26735.1Transposon Ty3-G Gag-Pol poly |
GO:0015074P:DNA integration GO:0003676F:nucleic acid binding |
DNA Metabolism
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SRR924327_primary_scf7180002222223_637-1341
Len: 704 bp
Hits: 20
E-val: 1.00E-104
Sim: 60.53%
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ROL46693.1Pogo transposable element with KRAB domain |
GO:0003677F:DNA binding GO:0110165C:cellular anatomical structure |
DNA Metabolism
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SRR924327_primary_scf7180002222404_128-1270
Len: 1,142 bp
Hits: 20
E-val: 4.40E-190
Sim: 87.23%
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XP_018965058.1 putative nuclease HARBI1 isoform X1 |
DNA Metabolism
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SRR924327_primary_scf7180002222621_898-1689
Len: 791 bp
Hits: 20
E-val: 2.80E-143
Sim: 92.27%
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XP_018918889.1 zinc finger BED domain-containing protein 4-like |
GO:0009791P:post-embryonic development GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
DNA Metabolism
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SRR924327_primary_scf7180002222807_1380-5280
Len: 3,900 bp
Hits: 20
E-val: 0
Sim: 89.64%
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XP_018925803.1 zinc finger protein 687b-like |
DNA Metabolism
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SRR924327_primary_scf7180002222937_1067-1796
Len: 729 bp
Hits: 16
E-val: 1.60E-63
Sim: 63.34%
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XP_018981468.1 LOW QUALITY PROTEIN: collagen alpha-1(XII) chain-like |
GO:0015914P:phospholipid transport GO:0120009P:intermembrane lipid transfer GO:0003676F:nucleic acid binding GO:0003677F:DNA binding GO:0005548F:phospholipid transporter activity GO:0008270F:zinc ion binding GO:0008289F:lipid binding GO:0008525F:phosphatidylcholine transporter activity GO:0008526F:phosphatidylinositol transfer activity GO:0031210F:phosphatidylcholine binding GO:0035091F:phosphatidylinositol binding GO:0005737C:cytoplasm GO:0012505C:endomembrane system GO:0016020C:membrane |
DNA Metabolism
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SRR924327_primary_scf7180002223765_671-1819
Len: 1,148 bp
Hits: 20
E-val: 5.40E-212
Sim: 80.34%
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RXN07498.1nuclease HARBI1 |
DNA Metabolism
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SRR924327_primary_scf7180002223824_1-1473
Len: 1,472 bp
Hits: 20
E-val: 4.30E-44
Sim: 91.78%
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XP_018946874.1 regulator of telomere elongation helicase 1-like |
GO:0006260P:DNA replication GO:0010569P:regulation of double-strand break repair via homologous recombination GO:0045910P:negative regulation of DNA recombination GO:0090657P:telomeric loop disassembly GO:1904430P:negative regulation of t-circle formation GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0009378F:four-way junction helicase activity GO:0016887F:ATP hydrolysis activity GO:0036121F:double-stranded DNA helicase activity GO:0051539F:4 iron, 4 sulfur cluster binding GO:0061749F:forked DNA-dependent helicase activity GO:0070182F:DNA polymerase binding GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus |
DNA Metabolism
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SRR924327_primary_scf7180002223844_1-1292
Len: 1,291 bp
Hits: 20
E-val: 3.90E-33
Sim: 68.06%
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CDQ79587.1unnamed protein product |
GO:0006402P:mRNA catabolic process GO:0031054P:pre-miRNA processing GO:0035278P:miRNA-mediated gene silencing by inhibition of translation GO:0003727F:single-stranded RNA binding GO:0004521F:RNA endonuclease activity GO:0035198F:miRNA binding GO:0005634C:nucleus GO:0016442C:RISC complex GO:0036464C:cytoplasmic ribonucleoprotein granule |
DNA Metabolism
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SRR924327_primary_scf7180002224436_1-1376
Len: 1,375 bp
Hits: 20
E-val: 4.50E-40
Sim: 82.2%
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XP_016099300.1 receptor-type tyrosine-protein phosphatase S-like isoform X16 |
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
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SRR924327_primary_scf7180002225632_718-2820
Len: 2,102 bp
Hits: 20
E-val: 3.90E-43
Sim: 70.73%
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XP_026139645.1protein MMS22-like |
GO:0000724P:double-strand break repair via homologous recombination GO:0031297P:replication fork processing GO:0003697F:single-stranded DNA binding GO:0035101C:FACT complex GO:0042555C:MCM complex GO:0043596C:nuclear replication fork GO:0090734C:site of DNA damage |
DNA Metabolism
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SRR924327_primary_scf7180002225813_386-1831
Len: 1,445 bp
Hits: 20
E-val: 4.20E-270
Sim: 95.43%
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XP_018982106.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF139-like |
GO:0036503P:ERAD pathway GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0036513C:Derlin-1 retrotranslocation complex |
DNA Metabolism
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SRR924327_primary_scf7180002225864_1-1603
Len: 1,602 bp
Hits: 20
E-val: 2.10E-68
Sim: 59.88%
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XP_018959566.1 LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger domain protein 2B-like |
DNA Metabolism
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SRR924327_primary_scf7180002225985_229-1071
Len: 842 bp
Hits: 20
E-val: 6.10E-88
Sim: 72.3%
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RXN31220.1putative transposase element L1Md-A101/L1Md-A102/L1Md-A2 |
DNA Metabolism
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SRR924327_primary_scf7180002226178_1-1278
Len: 1,277 bp
Hits: 20
E-val: 1.60E-108
Sim: 89.79%
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XP_016424805.1 ribonuclease P protein subunit p25-like protein |
GO:0001682P:tRNA 5'-leader removal GO:0003723F:RNA binding GO:0000172C:ribonuclease MRP complex GO:0005634C:nucleus |
DNA Metabolism
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SRR924327_primary_scf7180002228724_1-2060
Len: 2,059 bp
Hits: 20
E-val: 2.60E-23
Sim: 80.06%
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XP_016113073.1 lysine-specific histone demethylase 1B |
GO:0006338P:chromatin remodeling GO:0032259P:methylation GO:0008168F:methyltransferase activity GO:0008270F:zinc ion binding GO:0140682F:FAD-dependent H3K4me/H3K4me3 demethylase activity |
DNA Metabolism
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SRR924327_primary_scf7180002229222_1-980
Len: 979 bp
Hits: 20
E-val: 1.60E-116
Sim: 91.94%
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XP_018937756.1 E3 ubiquitin-protein ligase TRIM39-like |
GO:0045087P:innate immune response GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0005737C:cytoplasm |
DNA Metabolism
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SRR924327_primary_scf7180002229252_175-1078
Len: 903 bp
Hits: 20
E-val: 1.40E-34
Sim: 53.69%
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XP_018979663.1 LOW QUALITY PROTEIN: helicase SKI2W-like, partial |
GO:0006401P:RNA catabolic process GO:0070478P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay GO:0003676F:nucleic acid binding GO:0003723F:RNA binding GO:0003724F:RNA helicase activity GO:0004386F:helicase activity GO:0005524F:ATP binding GO:0016787F:hydrolase activity GO:0005737C:cytoplasm GO:0055087C:Ski complex |
DNA Metabolism
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SRR924327_primary_scf7180002229565_1-1188
Len: 1,187 bp
Hits: 20
E-val: 2.00E-116
Sim: 96.93%
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XP_016348382.1 kelch-like protein 8 |
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0030246F:carbohydrate binding GO:1990756F:ubiquitin-like ligase-substrate adaptor activity GO:0005737C:cytoplasm GO:0016020C:membrane GO:0031463C:Cul3-RING ubiquitin ligase complex |
DNA Metabolism
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SRR924327_primary_scf7180002230122_1-1307
Len: 1,306 bp
Hits: 20
E-val: 2.50E-16
Sim: 95.53%
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XP_026062012.1E3 ubiquitin-protein ligase RNF220-like isoform X7 |
GO:0016567P:protein ubiquitination GO:0021511P:spinal cord patterning GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity |
DNA Metabolism
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SRR924327_primary_scf7180002230249_532-944
Len: 412 bp
Hits: 20
E-val: 1.80E-53
Sim: 97.45%
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XP_018954973.1 putative histone-lysine N-methyltransferase PRDM6 |
GO:0006338P:chromatin remodeling GO:0010468P:regulation of gene expression GO:0008270F:zinc ion binding GO:0042054F:histone methyltransferase activity GO:0005634C:nucleus |
DNA Metabolism
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SRR924327_primary_scf7180002230810_1-891
Len: 890 bp
Hits: 20
E-val: 1.40E-26
Sim: 100%
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XP_026096839.1receptor-type tyrosine-protein phosphatase U-like isoform X2 |
GO:0006338P:chromatin remodeling GO:0007165P:signal transduction GO:0031175P:neuron projection development GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
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SRR924327_primary_scf7180002233804_1-1726
Len: 1,725 bp
Hits: 2
E-val: 3.20E-06
Sim: 68.48%
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XP_025762740.1low choriolytic enzyme isoform X1 |
GO:0000209P:protein polyubiquitination GO:0061630F:ubiquitin protein ligase activity |
DNA Metabolism
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SRR924327_primary_scf7180002234530_460-1442
Len: 982 bp
Hits: 20
E-val: 1.30E-92
Sim: 93.62%
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XP_018921264.1 septin-9-like isoform X1 |
DNA Metabolism
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