Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924338_primary_scf7180002623129_1-1028
Len: 1,027 bp
Hits: 20
E-val: 3.80E-23
Sim: 93.56%
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XP_026084529.1valine--tRNA ligase-like |
GO:0006438P:valyl-tRNA aminoacylation GO:0106074P:aminoacyl-tRNA metabolism involved in translational fidelity GO:0002161F:aminoacyl-tRNA deacylase activity GO:0004832F:valine-tRNA ligase activity GO:0005524F:ATP binding GO:0005829C:cytosol |
DNA Metabolism
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SRR924338_primary_scf7180002623865_1-697
Len: 696 bp
Hits: 20
E-val: 1.50E-18
Sim: 96.18%
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XP_018950568.1 LOW QUALITY PROTEIN: transcriptional regulator ATRX-like |
GO:0006281P:DNA repair GO:0006338P:chromatin remodeling GO:0010468P:regulation of gene expression GO:0010558P:negative regulation of macromolecule biosynthetic process GO:0031297P:replication fork processing GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0009378F:four-way junction helicase activity GO:0016787F:hydrolase activity GO:0031490F:chromatin DNA binding GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0000781C:chromosome, telomeric region GO:0005634C:nucleus GO:0005721C:pericentric heterochromatin |
DNA Metabolism
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SRR924338_primary_scf7180002628971_1-900
Len: 899 bp
Hits: 20
E-val: 1.30E-19
Sim: 92.9%
|
XP_018973123.1 small G protein signaling modulator 2-like |
GO:0016567P:protein ubiquitination GO:0035024P:negative regulation of Rho protein signal transduction GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0051260P:protein homooligomerization GO:0004842F:ubiquitin-protein transferase activity GO:0005096F:GTPase activator activity GO:0005634C:nucleus GO:0005768C:endosome GO:0031463C:Cul3-RING ubiquitin ligase complex |
DNA Metabolism
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SRR924338_primary_scf7180002629966_1-953
Len: 952 bp
Hits: 20
E-val: 7.80E-15
Sim: 90.16%
|
XP_026112189.1non-canonical poly(A) RNA polymerase PAPD7-like isoform X1 |
GO:0031123P:RNA 3'-end processing GO:0043634P:polyadenylation-dependent ncRNA catabolic process GO:0003729F:mRNA binding GO:1990817F:poly(A) RNA polymerase activity GO:0005730C:nucleolus GO:0031499C:TRAMP complex |
DNA Metabolism
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SRR924338_primary_scf7180002769377_338-991
Len: 653 bp
Hits: 20
E-val: 1.60E-120
Sim: 91.12%
|
XP_018922617.1 RING finger protein 223-like |
GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0016020C:membrane |
DNA Metabolism
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SRR924338_primary_scf7180002769972_1-1189
Len: 1,188 bp
Hits: 20
E-val: 7.20E-26
Sim: 97.42%
|
XP_016113974.1 cytoskeleton-associated protein 5 isoform X1 |
GO:0007051P:spindle organization GO:0030951P:establishment or maintenance of microtubule cytoskeleton polarity GO:0046785P:microtubule polymerization GO:0051010F:microtubule plus-end binding GO:0061863F:microtubule plus end polymerase GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0099080C:supramolecular complex |
DNA Metabolism
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SRR924338_primary_scf7180002771045_1-943
Len: 942 bp
Hits: 20
E-val: 1.50E-34
Sim: 84.01%
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XP_018959739.1 ribosomal biogenesis protein LAS1L-like isoform X1 |
GO:0000460P:maturation of 5.8S rRNA GO:0000470P:maturation of LSU-rRNA GO:0004519F:endonuclease activity GO:0005634C:nucleus GO:0030687C:preribosome, large subunit precursor GO:0090730C:Las1 complex |
DNA Metabolism
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SRR924338_primary_scf7180002771270_211-1137
Len: 926 bp
Hits: 20
E-val: 3.70E-155
Sim: 86.74%
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XP_018972320.1 RING finger protein 225-like |
GO:0006487P:protein N-linked glycosylation GO:0016567P:protein ubiquitination GO:0003827F:alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0000139C:Golgi membrane |
DNA Metabolism
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SRR924338_primary_scf7180002771586_128-1508
Len: 1,380 bp
Hits: 20
E-val: 3.70E-34
Sim: 87.05%
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XP_026096130.1ubinuclein-2-like isoform X3 |
GO:0006325P:chromatin organization GO:0005634C:nucleus |
DNA Metabolism
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SRR924338_primary_scf7180002771609_129-1387
Len: 1,258 bp
Hits: 20
E-val: 1.80E-30
Sim: 69.01%
|
XP_016403338.1 cullin-9-like |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0031625F:ubiquitin protein ligase binding GO:0005737C:cytoplasm |
DNA Metabolism
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SRR924338_primary_scf7180002772157_100-1708
Len: 1,608 bp
Hits: 20
E-val: 4.50E-249
Sim: 78.16%
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XP_018947606.1 LOW QUALITY PROTEIN: probable ribonuclease ZC3H12C |
GO:0003729F:mRNA binding GO:0004521F:RNA endonuclease activity GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0036464C:cytoplasmic ribonucleoprotein granule |
DNA Metabolism
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SRR924338_primary_scf7180002772609_1-389
Len: 388 bp
Hits: 20
E-val: 1.70E-13
Sim: 92.34%
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XP_016301157.1 PMS1 protein homolog 1 isoform X1 |
GO:0006298P:mismatch repair GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0030983F:mismatched DNA binding GO:0140664F:ATP-dependent DNA damage sensor activity GO:0032389C:MutLalpha complex |
DNA Metabolism
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SRR924338_primary_scf7180002775597_1-1005
Len: 1,004 bp
Hits: 20
E-val: 6.50E-20
Sim: 98.23%
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XP_016308851.1 lysine-specific histone demethylase 1B-like isoform X1 |
GO:0006338P:chromatin remodeling GO:0032259P:methylation GO:0008168F:methyltransferase activity GO:0008270F:zinc ion binding GO:0140682F:FAD-dependent H3K4me/H3K4me3 demethylase activity |
DNA Metabolism
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SRR924338_primary_scf7180002781600_1-812
Len: 811 bp
Hits: 20
E-val: 1.10E-49
Sim: 63.54%
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XP_026091402.1helicase ARIP4 isoform X1 |
GO:0006325P:chromatin organization GO:0140640F:catalytic activity, acting on a nucleic acid GO:0140657F:ATP-dependent activity |
DNA Metabolism
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SRR924338_primary_scf7180003058334_410-885
Len: 475 bp
Hits: 20
E-val: 4.30E-38
Sim: 97.37%
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XP_016146157.1 LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like |
GO:0000278P:mitotic cell cycle GO:0006272P:leading strand elongation GO:0006287P:base-excision repair, gap-filling GO:0006297P:nucleotide-excision repair, DNA gap filling GO:0045004P:DNA replication proofreading GO:0071897P:DNA biosynthetic process GO:0000166F:nucleotide binding GO:0003677F:DNA binding GO:0003887F:DNA-directed DNA polymerase activity GO:0008270F:zinc ion binding GO:0008310F:single-stranded DNA 3'-5' DNA exonuclease activity GO:0051539F:4 iron, 4 sulfur cluster binding GO:0008622C:epsilon DNA polymerase complex |
DNA Metabolism
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SRR924338_primary_scf7180003058387_1-815
Len: 814 bp
Hits: 20
E-val: 3.20E-33
Sim: 96.98%
|
ROI16383.1DNA replication licensing factor mcm4 |
GO:0000727P:double-strand break repair via break-induced replication GO:0001878P:response to yeast GO:0006271P:DNA strand elongation involved in DNA replication GO:1902975P:mitotic DNA replication initiation GO:0003682F:chromatin binding GO:0003697F:single-stranded DNA binding GO:0005524F:ATP binding GO:0009378F:four-way junction helicase activity GO:0016887F:ATP hydrolysis activity GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus GO:0042555C:MCM complex |
DNA Metabolism
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SRR924340_primary_scf7180002421796_1769-3505
Len: 1,736 bp
Hits: 20
E-val: 2.60E-298
Sim: 69.38%
|
RXN02216.1Transposon Ty3-I Gag-Pol poly |
GO:0006278P:RNA-templated DNA biosynthetic process GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004519F:endonuclease activity GO:0016787F:hydrolase activity GO:0046872F:metal ion binding |
DNA Metabolism
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SRR924340_primary_scf7180002422453_510-2861
Len: 2,351 bp
Hits: 20
E-val: 2.60E-293
Sim: 78.38%
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BAD04858.1reverse transcriptase |
GO:0006278P:RNA-templated DNA biosynthetic process GO:0003964F:RNA-directed DNA polymerase activity |
DNA Metabolism
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SRR924340_primary_scf7180002422770_1-1865
Len: 1,864 bp
Hits: 20
E-val: 2.40E-116
Sim: 96.93%
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XP_016348382.1 kelch-like protein 8 |
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0030246F:carbohydrate binding GO:1990756F:ubiquitin-like ligase-substrate adaptor activity GO:0005737C:cytoplasm GO:0016020C:membrane GO:0031463C:Cul3-RING ubiquitin ligase complex |
DNA Metabolism
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SRR924340_primary_scf7180002423139_103-726
Len: 623 bp
Hits: 20
E-val: 1.10E-41
Sim: 88.55%
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XP_026059217.1histone H1-like |
GO:0006334P:nucleosome assembly GO:0003677F:DNA binding GO:0030527F:structural constituent of chromatin GO:0000786C:nucleosome GO:0005634C:nucleus |
DNA Metabolism
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SRR924340_primary_scf7180002423444_1-1350
Len: 1,349 bp
Hits: 20
E-val: 2.00E-128
Sim: 81.32%
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XP_026113774.1zinc finger BED domain-containing protein 1-like |
GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
DNA Metabolism
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SRR924340_primary_scf7180002423768_115-1289
Len: 1,174 bp
Hits: 20
E-val: 9.20E-175
Sim: 82.75%
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XP_005751641.1 pogo transposable element with KRAB domain |
GO:0003677F:DNA binding GO:0005634C:nucleus |
DNA Metabolism
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SRR924340_primary_scf7180002424979_756-1636
Len: 880 bp
Hits: 20
E-val: 9.30E-55
Sim: 57.52%
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XP_016366126.1 probable E3 ubiquitin-protein ligase HERC4 |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0004842F:ubiquitin-protein transferase activity GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm |
DNA Metabolism
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SRR924340_primary_scf7180002426919_1-1137
Len: 1,136 bp
Hits: 20
E-val: 6.70E-21
Sim: 96.83%
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XP_016298434.1 receptor-type tyrosine-protein phosphatase delta-like |
GO:0006338P:chromatin remodeling GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0070593P:dendrite self-avoidance GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0098632F:cell-cell adhesion mediator activity GO:0140793F:histone H2AXY142 phosphatase activity GO:0005886C:plasma membrane GO:0030424C:axon |
DNA Metabolism
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SRR924340_primary_scf7180002426949_324-1310
Len: 986 bp
Hits: 20
E-val: 4.70E-180
Sim: 75.04%
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XP_018976423.1 LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1B-like |
GO:0006338P:chromatin remodeling GO:0032259P:methylation GO:0003723F:RNA binding GO:0140999F:histone H3K4 trimethyltransferase activity GO:0048188C:Set1C/COMPASS complex |
DNA Metabolism
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