Gene Function: DNA Metabolism

Functional and statistical data for significant genes

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Showing 1,023 results (Page 11 of 41)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR924340_primary_scf7180002444570_1-565
Len: 564 bp
Hits: 20
E-val: 6.60E-54
Sim: 76.27%
 XP_018981435.1 DNA damage-binding protein 1-like
GO:0006281P:DNA repair
GO:0010564P:regulation of cell cycle process
GO:0043066P:negative regulation of apoptotic process
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0005634C:nucleus
GO:0035861C:site of double-strand break
DNA Metabolism
SRR924340_primary_scf7180002445293_1-970
Len: 969 bp
Hits: 20
E-val: 4.70E-68
Sim: 77.25%
 XP_016418185.1 macrophage mannose receptor 1-like, partial
GO:0015074P:DNA integration
GO:0003676F:nucleic acid binding
GO:0003824F:catalytic activity
DNA Metabolism
SRR924340_primary_scf7180002448121_1-1021
Len: 1,020 bp
Hits: 20
E-val: 7.00E-46
Sim: 56.94%
 XP_026144390.1double-strand-break repair protein rad21 homolog isoform X2
GO:0007059P:chromosome segregation
GO:0007062P:sister chromatid cohesion
GO:1990414P:replication-born double-strand break repair via sister chromatid exchange
GO:0003682F:chromatin binding
GO:0005634C:nucleus
GO:0005694C:chromosome
GO:0008278C:cohesin complex
DNA Metabolism
SRR924340_primary_scf7180002488965_1-443
Len: 442 bp
Hits: 20
E-val: 1.90E-16
Sim: 88.41%
 XP_016088909.1 receptor-type tyrosine-protein phosphatase F-like
GO:0006338P:chromatin remodeling
GO:0007155P:cell adhesion
GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity
GO:0008201F:heparin binding
GO:0030946F:protein tyrosine phosphatase activity, metal-dependent
GO:0140793F:histone H2AXY142 phosphatase activity
GO:0016020C:membrane
DNA Metabolism
SRR924681_primary_scf7180003492872_1-1538
Len: 1,537 bp
Hits: 20
E-val: 3.70E-131
Sim: 86.48%
 XP_026059140.1piggyBac transposable element-derived protein 4-like
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
GO:0030527F:structural constituent of chromatin
GO:0046982F:protein heterodimerization activity
GO:0000786C:nucleosome
GO:0005634C:nucleus
DNA Metabolism
SRR924681_primary_scf7180003494205_299-2136
Len: 1,837 bp
Hits: 20
E-val: 3.40E-168
Sim: 63.29%
 XP_020464748.1zinc finger BED domain-containing protein 1-like
GO:0009791P:post-embryonic development
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0046983F:protein dimerization activity
GO:0005634C:nucleus
DNA Metabolism
SRR924681_primary_scf7180003495138_436-1233
Len: 797 bp
Hits: 20
E-val: 3.00E-129
Sim: 79.61%
 RXN19979.1Retrovirus-related Pol polyprotein from transposon 297
GO:0006278P:RNA-templated DNA biosynthetic process
GO:0015074P:DNA integration
GO:0003676F:nucleic acid binding
GO:0003964F:RNA-directed DNA polymerase activity
GO:0004519F:endonuclease activity
GO:0016787F:hydrolase activity
DNA Metabolism
SRR924681_primary_scf7180003495575_1-751
Len: 750 bp
Hits: 20
E-val: 1.20E-66
Sim: 84.23%
 XP_018934436.1 putative nuclease HARBI1
GO:0004518F:nuclease activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
DNA Metabolism
SRR924681_primary_scf7180003495876_605-1907
Len: 1,302 bp
Hits: 20
E-val: 1.10E-237
Sim: 80.52%
 XP_018933514.1 zinc finger BED domain-containing protein 4-like
GO:0009791P:post-embryonic development
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
GO:0046983F:protein dimerization activity
GO:0005634C:nucleus
DNA Metabolism
SRR924681_primary_scf7180003496542_422-2921
Len: 2,499 bp
Hits: 20
E-val: 2.50E-206
Sim: 83.11%
 XP_018929896.1 EMILIN-2-like isoform X1
GO:0006302P:double-strand break repair
GO:0051276P:chromosome organization
GO:0005524F:ATP binding
GO:0005576C:extracellular region
GO:0005694C:chromosome
DNA Metabolism
SRR924681_primary_scf7180003497376_334-1380
Len: 1,046 bp
Hits: 20
E-val: 3.10E-49
Sim: 63.4%
 XP_018927077.1 E3 ubiquitin-protein ligase RBBP6-like isoform X1
GO:0006397P:mRNA processing
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0003676F:nucleic acid binding
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0061630F:ubiquitin protein ligase activity
GO:0005634C:nucleus
DNA Metabolism
SRR924681_primary_scf7180003498029_1-1310
Len: 1,309 bp
Hits: 20
E-val: 2.40E-62
Sim: 93.17%
 XP_016380104.1 brevican core protein-like isoform X1
GO:0001501P:skeletal system development
GO:0002052P:positive regulation of neuroblast proliferation
GO:0007155P:cell adhesion
GO:0007417P:central nervous system development
GO:0010001P:glial cell differentiation
GO:0000175F:3'-5'-RNA exonuclease activity
GO:0003676F:nucleic acid binding
GO:0005540F:hyaluronic acid binding
GO:0030246F:carbohydrate binding
GO:0005615C:extracellular space
GO:0045202C:synapse
GO:0072534C:perineuronal net
DNA Metabolism
SRR924681_primary_scf7180003498071_1-1012
Len: 1,011 bp
Hits: 20
E-val: 1.00E-169
Sim: 90.95%
 XP_018970048.1 PWWP domain-containing protein 2B-like isoform X1
GO:0003682F:chromatin binding
GO:0005634C:nucleus
GO:0010369C:chromocenter
DNA Metabolism
SRR924681_primary_scf7180003499214_1-1409
Len: 1,408 bp
Hits: 20
E-val: 6.20E-69
Sim: 65.03%
 XP_018941182.1 ATPase family AAA domain-containing protein 2-like
GO:0006338P:chromatin remodeling
GO:0005488F:binding
GO:0000502C:proteasome complex
GO:0005622C:intracellular anatomical structure
DNA Metabolism
SRR924681_primary_scf7180003501278_1-862
Len: 861 bp
Hits: 20
E-val: 2.70E-38
Sim: 100%
 XP_026098624.1roquin-1-like isoform X1
GO:0000209P:protein polyubiquitination
GO:0000288P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0003725F:double-stranded RNA binding
GO:0003729F:mRNA binding
GO:0008270F:zinc ion binding
GO:0035613F:RNA stem-loop binding
GO:0061630F:ubiquitin protein ligase activity
GO:0000932C:P-body
GO:0010494C:cytoplasmic stress granule
DNA Metabolism
SRR924681_primary_scf7180003501734_1-819
Len: 818 bp
Hits: 20
E-val: 2.80E-29
Sim: 90.52%
 XP_018974085.1 nuclear protein localization protein 4 homolog
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0007601P:visual perception
GO:0004117F:calmodulin-activated dual specificity 3',5'-cyclic-GMP, 3',5'-cyclic-AMP phosphodiesterase activity
GO:0008270F:zinc ion binding
GO:0030553F:cGMP binding
GO:0031625F:ubiquitin protein ligase binding
GO:0043130F:ubiquitin binding
GO:0048101F:calmodulin-activated 3',5'-cyclic-GMP phosphodiesterase activity
GO:0005634C:nucleus
DNA Metabolism
SRR924681_primary_scf7180003503945_1-638
Len: 637 bp
Hits: 20
E-val: 3.90E-119
Sim: 85.77%
 RXN35649.1Retrovirus-related Pol polyprotein from transposon 412
GO:0006278P:RNA-templated DNA biosynthetic process
GO:0015074P:DNA integration
GO:0003676F:nucleic acid binding
GO:0003964F:RNA-directed DNA polymerase activity
GO:0004519F:endonuclease activity
DNA Metabolism
SRR924681_primary_scf7180003503967_448-3261
Len: 2,813 bp
Hits: 20
E-val: 3.20E-101
Sim: 86.78%
 XP_018921654.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HUWE1-like
GO:0000209P:protein polyubiquitination
GO:0006284P:base-excision repair
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0007030P:Golgi organization
GO:0061025P:membrane fusion
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0000139C:Golgi membrane
GO:0005634C:nucleus
DNA Metabolism
SRR924681_primary_scf7180003504805_520-1688
Len: 1,168 bp
Hits: 20
E-val: 1.40E-37
Sim: 100%
 XP_026098624.1roquin-1-like isoform X1
GO:0000209P:protein polyubiquitination
GO:0000288P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0003725F:double-stranded RNA binding
GO:0003729F:mRNA binding
GO:0008270F:zinc ion binding
GO:0035613F:RNA stem-loop binding
GO:0061630F:ubiquitin protein ligase activity
GO:0000932C:P-body
GO:0010494C:cytoplasmic stress granule
DNA Metabolism
SRR924681_primary_scf7180003506466_1-1187
Len: 1,186 bp
Hits: 20
E-val: 2.20E-14
Sim: 99.25%
 XP_026057045.1cohesin subunit SA-1-like
GO:0007059P:chromosome segregation
GO:0007062P:sister chromatid cohesion
GO:0051301P:cell division
GO:0003682F:chromatin binding
GO:0000775C:chromosome, centromeric region
GO:0000785C:chromatin
GO:0005634C:nucleus
GO:0008278C:cohesin complex
DNA Metabolism
SRR924681_primary_scf7180003508082_1-1408
Len: 1,407 bp
Hits: 20
E-val: 6.10E-24
Sim: 91.2%
 ROI81838.1E3 ubiquitin-protein ligase BRE1B
GO:0006325P:chromatin organization
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005634C:nucleus
GO:0016020C:membrane
GO:0033503C:HULC complex
DNA Metabolism
SRR924681_primary_scf7180003508814_105-783
Len: 678 bp
Hits: 20
E-val: 6.30E-51
Sim: 56.62%
 ROL48786.1THAP domain-containing protein 11
GO:0003677F:DNA binding
GO:0046872F:metal ion binding
GO:0005634C:nucleus
DNA Metabolism
SRR924681_primary_scf7180003510022_55-1353
Len: 1,298 bp
Hits: 20
E-val: 1.60E-23
Sim: 91.04%
 XP_016107991.1 receptor-type tyrosine-protein phosphatase U-like
GO:0001757P:somite specification
GO:0006338P:chromatin remodeling
GO:0007155P:cell adhesion
GO:0007165P:signal transduction
GO:0031175P:neuron projection development
GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity
GO:0030946F:protein tyrosine phosphatase activity, metal-dependent
GO:0140793F:histone H2AXY142 phosphatase activity
GO:0005886C:plasma membrane
GO:0070161C:anchoring junction
DNA Metabolism
SRR924681_primary_scf7180003511353_215-472
Len: 257 bp
Hits: 20
E-val: 1.20E-39
Sim: 98%
 XP_018924984.1 endonuclease G, mitochondrial
GO:0006309P:apoptotic DNA fragmentation
GO:0000014F:single-stranded DNA endodeoxyribonuclease activity
GO:0003676F:nucleic acid binding
GO:0004521F:RNA endonuclease activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
GO:0005743C:mitochondrial inner membrane
DNA Metabolism
SRR924681_primary_scf7180003513937_1-2607
Len: 2,606 bp
Hits: 20
E-val: 1.40E-90
Sim: 75.5%
 XP_018962150.1 apoptosis-resistant E3 ubiquitin protein ligase 1-like
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0043066P:negative regulation of apoptotic process
GO:0061630F:ubiquitin protein ligase activity
GO:0005829C:cytosol
DNA Metabolism