Gene Function: DNA Metabolism

Functional and statistical data for significant genes

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Showing 1,023 results (Page 13 of 41)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR924681_primary_scf7180003595321_1-1449
Len: 1,448 bp
Hits: 20
E-val: 4.70E-19
Sim: 61.44%
 XP_018967855.1 receptor-type tyrosine-protein phosphatase gamma-like
GO:0006338P:chromatin remodeling
GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity
GO:0030946F:protein tyrosine phosphatase activity, metal-dependent
GO:0140793F:histone H2AXY142 phosphatase activity
GO:0016020C:membrane
DNA Metabolism
SRR924681_primary_scf7180003597119_297-812
Len: 515 bp
Hits: 20
E-val: 4.10E-87
Sim: 88.84%
 XP_018927641.1 nuclear factor 7, ovary-like
GO:0045087P:innate immune response
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR924681_primary_scf7180003598423_1-1274
Len: 1,273 bp
Hits: 20
E-val: 1.80E-155
Sim: 82.12%
 XP_026101123.1methyl-CpG-binding domain protein 5
GO:0003677F:DNA binding
GO:0003682F:chromatin binding
GO:0005634C:nucleus
GO:0010369C:chromocenter
DNA Metabolism
SRR924681_primary_scf7180003601893_446-1017
Len: 571 bp
Hits: 20
E-val: 1.80E-99
Sim: 83%
 XP_018923327.1 putative nuclease HARBI1
GO:0004518F:nuclease activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
DNA Metabolism
SRR924681_primary_scf7180003602731_28-972
Len: 944 bp
Hits: 20
E-val: 4.10E-16
Sim: 93.64%
 XP_026056864.1DDB1- and CUL4-associated factor 11-like
GO:0016567P:protein ubiquitination
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0080008C:Cul4-RING E3 ubiquitin ligase complex
DNA Metabolism
SRR924681_primary_scf7180003604928_1-644
Len: 643 bp
Hits: 20
E-val: 2.10E-24
Sim: 99.29%
 XP_018941435.1 LOW QUALITY PROTEIN: ankyrin repeat and BTB/POZ domain-containing protein BTBD11-B-like
GO:0003677F:DNA binding
GO:0030527F:structural constituent of chromatin
GO:0046982F:protein heterodimerization activity
GO:0000786C:nucleosome
GO:0016020C:membrane
DNA Metabolism
SRR924681_primary_scf7180003607399_1-913
Len: 912 bp
Hits: 20
E-val: 1.10E-26
Sim: 59.2%
 XP_026113086.1ubinuclein-2-like isoform X2
GO:0006325P:chromatin organization
GO:0005634C:nucleus
DNA Metabolism
SRR924681_primary_scf7180003607442_1-1001
Len: 1,000 bp
Hits: 20
E-val: 9.60E-64
Sim: 72.68%
 XP_026110588.1inactive peptidyl-prolyl cis-trans isomerase FKBP6-like isoform X1
GO:0007283P:spermatogenesis
GO:0034587P:piRNA processing
GO:0051879F:Hsp90 protein binding
GO:0140838F:RNA polymerase II CTD heptapeptide repeat peptidyl-prolyl isomerase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR924681_primary_scf7180003608710_1-1185
Len: 1,184 bp
Hits: 20
E-val: 7.20E-18
Sim: 100%
 CDQ87246.1unnamed protein product
GO:0008582P:regulation of synaptic assembly at neuromuscular junction
GO:0016198P:axon choice point recognition
GO:0016567P:protein ubiquitination
GO:0021952P:central nervous system projection neuron axonogenesis
GO:0021986P:habenula development
GO:0031290P:retinal ganglion cell axon guidance
GO:0032922P:circadian regulation of gene expression
GO:0048066P:developmental pigmentation
GO:0048677P:axon extension involved in regeneration
GO:0050905P:neuromuscular process
GO:1902667P:regulation of axon guidance
GO:0005085F:guanyl-nucleotide exchange factor activity
GO:0008270F:zinc ion binding
GO:0031267F:small GTPase binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005634C:nucleus
GO:0005737C:cytoplasm
GO:0005856C:cytoskeleton
GO:0005886C:plasma membrane
GO:0030424C:axon
DNA Metabolism
SRR924681_primary_scf7180003609602_1-1363
Len: 1,362 bp
Hits: 20
E-val: 1.40E-46
Sim: 88.67%
 XP_016415838.1 histone-lysine N-methyltransferase SETD1B-A-like
GO:0006338P:chromatin remodeling
GO:0032259P:methylation
GO:0003723F:RNA binding
GO:0140999F:histone H3K4 trimethyltransferase activity
GO:0005694C:chromosome
GO:0016607C:nuclear speck
GO:0048188C:Set1C/COMPASS complex
DNA Metabolism
SRR924681_primary_scf7180003611734_379-1210
Len: 831 bp
Hits: 20
E-val: 9.50E-33
Sim: 98.1%
 CAG09725.1unnamed protein product
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043484P:regulation of RNA splicing
GO:1990756F:ubiquitin-like ligase-substrate adaptor activity
GO:0005634C:nucleus
GO:0031463C:Cul3-RING ubiquitin ligase complex
GO:0043034C:costamere
DNA Metabolism
SRR924681_primary_scf7180003716722_1-1603
Len: 1,602 bp
Hits: 20
E-val: 5.70E-18
Sim: 92.59%
 ROI27773.1putative ATP-dependent RNA helicase DDX31
GO:0042254P:ribosome biogenesis
GO:0003723F:RNA binding
GO:0003724F:RNA helicase activity
GO:0005524F:ATP binding
GO:0016887F:ATP hydrolysis activity
GO:0005634C:nucleus
GO:0016020C:membrane
DNA Metabolism
SRR924681_primary_scf7180003717034_1-1898
Len: 1,897 bp
Hits: 20
E-val: 1.30E-24
Sim: 97.97%
 XP_018981435.1 DNA damage-binding protein 1-like
GO:0006281P:DNA repair
GO:0016567P:protein ubiquitination
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0003676F:nucleic acid binding
GO:0005634C:nucleus
DNA Metabolism
SRR924681_primary_scf7180003717168_1-1283
Len: 1,282 bp
Hits: 20
E-val: 4.20E-32
Sim: 97.88%
 RXN30184.1DEP domain-containing 7 isoform X2
GO:0006313P:DNA transposition
GO:0015074P:DNA integration
GO:0035556P:intracellular signal transduction
GO:0003677F:DNA binding
DNA Metabolism
SRR924681_primary_scf7180003717258_1-1130
Len: 1,129 bp
Hits: 20
E-val: 1.50E-20
Sim: 82.22%
 XP_016139987.1 probable E3 ubiquitin-protein ligase HERC3
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0061630F:ubiquitin protein ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR924681_primary_scf7180003717486_1-1541
Len: 1,540 bp
Hits: 20
E-val: 4.20E-42
Sim: 61.46%
 XP_026096469.1DNA polymerase epsilon catalytic subunit A
GO:0006281P:DNA repair
GO:0005488F:binding
DNA Metabolism
SRR924681_primary_scf7180003717909_1-1682
Len: 1,681 bp
Hits: 20
E-val: 1.20E-63
Sim: 58.05%
 XP_016121707.1 protein zyg-11 homolog
GO:0048513P:animal organ development
GO:0016020C:membrane
GO:0031462C:Cul2-RING ubiquitin ligase complex
DNA Metabolism
SRR924681_primary_scf7180003718600_1-1014
Len: 1,013 bp
Hits: 20
E-val: 2.60E-48
Sim: 65.87%
 CAF96862.1unnamed protein product, partial
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0019902F:phosphatase binding
GO:0031464C:Cul4A-RING E3 ubiquitin ligase complex
DNA Metabolism
SRR924681_primary_scf7180003719060_220-1187
Len: 967 bp
Hits: 20
E-val: 2.00E-74
Sim: 97.98%
 XP_026076986.1kelch repeat and BTB domain-containing protein 8-like
GO:0006417P:regulation of translation
GO:0006513P:protein monoubiquitination
GO:0014029P:neural crest formation
GO:0014032P:neural crest cell development
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:1990756F:ubiquitin-like ligase-substrate adaptor activity
GO:0005794C:Golgi apparatus
GO:0005819C:spindle
GO:0016020C:membrane
GO:0031463C:Cul3-RING ubiquitin ligase complex
DNA Metabolism
SRR924681_primary_scf7180003720047_1001-1375
Len: 374 bp
Hits: 20
E-val: 4.70E-48
Sim: 65.63%
 XP_017341366.1 zinc finger BED domain-containing protein 1-like
GO:0016874F:ligase activity
GO:0046983F:protein dimerization activity
DNA Metabolism
SRR924681_primary_scf7180003721046_710-1457
Len: 747 bp
Hits: 20
E-val: 5.30E-35
Sim: 94.46%
 XP_026129799.1cryptochrome-2-like
GO:0006281P:DNA repair
GO:0032922P:circadian regulation of gene expression
GO:0043153P:entrainment of circadian clock by photoperiod
GO:0003677F:DNA binding
GO:0003904F:deoxyribodipyrimidine photo-lyase activity
GO:0003914F:DNA (6-4) photolyase activity
GO:0071949F:FAD binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
DNA Metabolism
SRR924681_primary_scf7180003721282_1-1087
Len: 1,086 bp
Hits: 20
E-val: 1.00E-31
Sim: 65.8%
 XP_026068095.1centriolin-like isoform X3
GO:0007076P:mitotic chromosome condensation
GO:0003682F:chromatin binding
GO:0000785C:chromatin
GO:0000793C:condensed chromosome
GO:0000796C:condensin complex
DNA Metabolism
SRR924681_primary_scf7180003722037_1-810
Len: 809 bp
Hits: 20
E-val: 3.40E-88
Sim: 88.19%
 XP_018965368.1 zinc phosphodiesterase ELAC protein 1
GO:0042780P:tRNA 3'-end processing
GO:0042781F:3'-tRNA processing endoribonuclease activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
DNA Metabolism
SRR924681_primary_scf7180003722440_1-600
Len: 599 bp
Hits: 20
E-val: 3.50E-37
Sim: 52.86%
 XP_018936305.1 E3 ubiquitin-protein ligase UBR1
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0071596P:ubiquitin-dependent protein catabolic process via the N-end rule pathway
GO:0004842F:ubiquitin-protein transferase activity
GO:0008270F:zinc ion binding
GO:0016740F:transferase activity
GO:0061630F:ubiquitin protein ligase activity
GO:0000151C:ubiquitin ligase complex
GO:0005737C:cytoplasm
DNA Metabolism
SRR924681_primary_scf7180003722949_1-1323
Len: 1,322 bp
Hits: 20
E-val: 1.10E-14
Sim: 90.16%
 XP_026112189.1non-canonical poly(A) RNA polymerase PAPD7-like isoform X1
GO:0031123P:RNA 3'-end processing
GO:0043634P:polyadenylation-dependent ncRNA catabolic process
GO:0003729F:mRNA binding
GO:1990817F:poly(A) RNA polymerase activity
GO:0005730C:nucleolus
GO:0031499C:TRAMP complex
DNA Metabolism