Gene Function: DNA Metabolism

Functional and statistical data for significant genes

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Showing 1,023 results (Page 15 of 41)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR941867_primary_scf7180002026476_170-931
Len: 761 bp
Hits: 20
E-val: 2.60E-122
Sim: 80.12%
 RXN07498.1nuclease HARBI1
GO:0004518F:nuclease activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002028252_1-1520
Len: 1,519 bp
Hits: 20
E-val: 1.50E-39
Sim: 72.17%
 XP_018933739.1 DNA replication licensing factor MCM7
GO:0000727P:double-strand break repair via break-induced replication
GO:0006270P:DNA replication initiation
GO:0006271P:DNA strand elongation involved in DNA replication
GO:1902017P:regulation of cilium assembly
GO:0003697F:single-stranded DNA binding
GO:0016787F:hydrolase activity
GO:0017116F:single-stranded DNA helicase activity
GO:0005634C:nucleus
GO:0042555C:MCM complex
DNA Metabolism
SRR941867_primary_scf7180002029571_1-3983
Len: 3,982 bp
Hits: 20
E-val: 3.40E-27
Sim: 68.5%
 XP_018936179.1 transcription factor SOX-5-like
GO:0030318P:melanocyte differentiation
GO:0050794P:regulation of cellular process
GO:0050935P:iridophore differentiation
GO:0050936P:xanthophore differentiation
GO:0003677F:DNA binding
DNA Metabolism
SRR941867_primary_scf7180002029583_1-6860
Len: 6,859 bp
Hits: 20
E-val: 8.50E-87
Sim: 98.28%
 XP_018931707.1 LOW QUALITY PROTEIN: zinc finger SWIM domain-containing protein 8-like
GO:0008270F:zinc ion binding
GO:0031462C:Cul2-RING ubiquitin ligase complex
DNA Metabolism
SRR941867_primary_scf7180002029620_1504-4899
Len: 3,395 bp
Hits: 20
E-val: 0
Sim: 90.72%
 XP_016365305.1 AT-hook DNA-binding motif-containing protein 1-like
GO:0003677F:DNA binding
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002029728_1464-2093
Len: 629 bp
Hits: 20
E-val: 1.90E-49
Sim: 86.95%
 RXN19047.1histone H1-like protein
GO:0006334P:nucleosome assembly
GO:0030261P:chromosome condensation
GO:0045910P:negative regulation of DNA recombination
GO:0003690F:double-stranded DNA binding
GO:0030527F:structural constituent of chromatin
GO:0031492F:nucleosomal DNA binding
GO:0000786C:nucleosome
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002029946_543-1986
Len: 1,443 bp
Hits: 20
E-val: 9.10E-132
Sim: 58.79%
 XP_026112900.1protein ALP1-like isoform X1
GO:0004518F:nuclease activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002030327_1-5858
Len: 5,857 bp
Hits: 20
E-val: 0
Sim: 72.51%
 XP_018964911.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase MYCBP2-like, partial
GO:0008582P:regulation of synaptic assembly at neuromuscular junction
GO:0016198P:axon choice point recognition
GO:0021952P:central nervous system projection neuron axonogenesis
GO:0021986P:habenula development
GO:0031290P:retinal ganglion cell axon guidance
GO:0032922P:circadian regulation of gene expression
GO:0048066P:developmental pigmentation
GO:0048677P:axon extension involved in regeneration
GO:0050905P:neuromuscular process
GO:1902667P:regulation of axon guidance
GO:0005085F:guanyl-nucleotide exchange factor activity
GO:0031267F:small GTPase binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005634C:nucleus
GO:0005737C:cytoplasm
GO:0005886C:plasma membrane
GO:0042995C:cell projection
DNA Metabolism
SRR941867_primary_scf7180002030539_1-3355
Len: 3,354 bp
Hits: 20
E-val: 2.00E-57
Sim: 98.32%
 XP_018929497.1 receptor-type tyrosine-protein phosphatase delta-like
GO:0006338P:chromatin remodeling
GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity
GO:0030946F:protein tyrosine phosphatase activity, metal-dependent
GO:0140793F:histone H2AXY142 phosphatase activity
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002031502_1050-3923
Len: 2,873 bp
Hits: 20
E-val: 0
Sim: 94.05%
 XP_018969609.1 LOW QUALITY PROTEIN: zinc finger BED domain-containing protein 4-like
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
GO:0046983F:protein dimerization activity
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002031962_280-1097
Len: 817 bp
Hits: 20
E-val: 2.50E-102
Sim: 89.8%
 XP_018941090.1 E3 ubiquitin-protein ligase TRIM21-like
GO:0045087P:innate immune response
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002033181_41-4560
Len: 4,519 bp
Hits: 20
E-val: 0
Sim: 81.47%
 XP_016431351.1 helicase with zinc finger domain 2-like
GO:0031110P:regulation of microtubule polymerization or depolymerization
GO:0003723F:RNA binding
GO:0004540F:RNA nuclease activity
GO:0005524F:ATP binding
GO:0016887F:ATP hydrolysis activity
GO:0043139F:5'-3' DNA helicase activity
DNA Metabolism
SRR941867_primary_scf7180002033896_377-1612
Len: 1,235 bp
Hits: 20
E-val: 4.20E-138
Sim: 87.75%
 XP_016351985.1 F-box/LRR-repeat protein 14-like
GO:0016567P:protein ubiquitination
GO:0031146P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0004842F:ubiquitin-protein transferase activity
GO:0019005C:SCF ubiquitin ligase complex
DNA Metabolism
SRR941867_primary_scf7180002033997_1-107
Len: 106 bp
Hits: 20
E-val: 2.90E-11
Sim: 92.72%
 ROI16594.1Transposable element Tcb2 transposase
GO:0006313P:DNA transposition
GO:0015074P:DNA integration
GO:0016973P:poly(A)+ mRNA export from nucleus
GO:0003677F:DNA binding
DNA Metabolism
SRR941867_primary_scf7180002034582_1-1467
Len: 1,466 bp
Hits: 20
E-val: 1.50E-62
Sim: 60.67%
 XP_016119555.1 probable E3 ubiquitin-protein ligase HERC4
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0004842F:ubiquitin-protein transferase activity
GO:0016874F:ligase activity
GO:0061630F:ubiquitin protein ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002037226_716-1075
Len: 359 bp
Hits: 20
E-val: 5.30E-57
Sim: 86.23%
 ABV31711.1transposase
GO:0006313P:DNA transposition
GO:0015074P:DNA integration
GO:0003677F:DNA binding
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002037325_1-2832
Len: 2,831 bp
Hits: 20
E-val: 8.10E-68
Sim: 67.78%
 XP_018931625.1 transcription initiation factor TFIID subunit 8-like
GO:0006313P:DNA transposition
GO:0015074P:DNA integration
GO:0003677F:DNA binding
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002037709_393-1331
Len: 938 bp
Hits: 20
E-val: 6.60E-176
Sim: 73.44%
 RXN37624.1nuclease HARBI1
GO:0004518F:nuclease activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002037997_125-953
Len: 828 bp
Hits: 20
E-val: 3.50E-27
Sim: 73.53%
 NP_997733.2serine/threonine-protein phosphatase 1 regulatory subunit 10
GO:0008157F:protein phosphatase 1 binding
GO:0046872F:metal ion binding
GO:0000785C:chromatin
GO:0072357C:PTW/PP1 phosphatase complex
DNA Metabolism
SRR941867_primary_scf7180002038287_1-1078
Len: 1,077 bp
Hits: 20
E-val: 9.10E-28
Sim: 81.55%
 KPP65631.1WD repeat-containing protein 48-like
GO:1905168P:positive regulation of double-strand break repair via homologous recombination
GO:0003690F:double-stranded DNA binding
GO:0003697F:single-stranded DNA binding
GO:0005525F:GTP binding
GO:0035800F:deubiquitinase activator activity
GO:0043130F:ubiquitin binding
GO:0005634C:nucleus
GO:0005764C:lysosome
GO:0005770C:late endosome
DNA Metabolism
SRR941867_primary_scf7180002038602_1526-2044
Len: 518 bp
Hits: 20
E-val: 1.30E-67
Sim: 74.3%
 XP_027021272.1zinc finger BED domain-containing protein 1-like
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
GO:0046983F:protein dimerization activity
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002038634_43-1584
Len: 1,541 bp
Hits: 20
E-val: 8.90E-287
Sim: 79.95%
 XP_018933514.1 zinc finger BED domain-containing protein 4-like
GO:0009791P:post-embryonic development
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
GO:0046983F:protein dimerization activity
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002041084_1-1790
Len: 1,789 bp
Hits: 20
E-val: 2.00E-51
Sim: 84.69%
 XP_016091013.1 SCAN domain-containing protein 3-like
GO:0006278P:RNA-templated DNA biosynthetic process
GO:0015074P:DNA integration
GO:0003676F:nucleic acid binding
GO:0003964F:RNA-directed DNA polymerase activity
GO:0004519F:endonuclease activity
GO:0008270F:zinc ion binding
DNA Metabolism
SRR941867_primary_scf7180002041481_1881-4892
Len: 3,011 bp
Hits: 20
E-val: 1.80E-33
Sim: 96.97%
 RXN21664.1chromodomain-helicase-DNA-binding 3-like protein
GO:0006338P:chromatin remodeling
GO:0007417P:central nervous system development
GO:0048589P:developmental growth
GO:0003677F:DNA binding
GO:0003682F:chromatin binding
GO:0005524F:ATP binding
GO:0008270F:zinc ion binding
GO:0009378F:four-way junction helicase activity
GO:0016887F:ATP hydrolysis activity
GO:0036121F:double-stranded DNA helicase activity
GO:0042393F:histone binding
GO:0061749F:forked DNA-dependent helicase activity
GO:0140658F:ATP-dependent chromatin remodeler activity
GO:1990518F:single-stranded 3'-5' DNA helicase activity
GO:0016581C:NuRD complex
DNA Metabolism
SRR941867_primary_scf7180002043006_1-2940
Len: 2,939 bp
Hits: 20
E-val: 5.00E-28
Sim: 87.76%
 XP_018948736.1 LOW QUALITY PROTEIN: origin recognition complex subunit 5
GO:0006270P:DNA replication initiation
GO:0003688F:DNA replication origin binding
GO:0005664C:nuclear origin of replication recognition complex
DNA Metabolism