Gene Function: DNA Metabolism

Functional and statistical data for significant genes

Download
Showing 1,023 results (Page 16 of 41)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR941867_primary_scf7180002044171_1-2215
Len: 2,214 bp
Hits: 20
E-val: 3.40E-85
Sim: 70.81%
 XP_026109832.1retinoic acid receptor alpha-B-like
GO:0050794P:regulation of cellular process
GO:0051716P:cellular response to stimulus
GO:0003677F:DNA binding
DNA Metabolism
SRR941867_primary_scf7180002044869_1-1360
Len: 1,359 bp
Hits: 20
E-val: 5.70E-43
Sim: 98.76%
 XP_018922658.1 probable ATP-dependent RNA helicase DDX5
GO:0003676F:nucleic acid binding
GO:0003724F:RNA helicase activity
GO:0005524F:ATP binding
GO:0016787F:hydrolase activity
DNA Metabolism
SRR941867_primary_scf7180002046079_1-662
Len: 661 bp
Hits: 20
E-val: 9.60E-12
Sim: 93.5%
 XP_026071787.1HMG box-containing protein 4-like isoform X1
GO:0003677F:DNA binding
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002046572_1-1252
Len: 1,251 bp
Hits: 20
E-val: 1.20E-63
Sim: 86.47%
 XP_016423343.1 cullin-4B-like
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0031625F:ubiquitin protein ligase binding
GO:0031461C:cullin-RING ubiquitin ligase complex
DNA Metabolism
SRR941867_primary_scf7180002046617_1-1443
Len: 1,442 bp
Hits: 20
E-val: 3.10E-47
Sim: 96.69%
 XP_016428802.1 protein FAM172A-like isoform X1
GO:0006397P:mRNA processing
GO:0008380P:RNA splicing
GO:0031048P:regulatory ncRNA-mediated heterochromatin formation
GO:0035197F:siRNA binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002047677_346-1227
Len: 881 bp
Hits: 20
E-val: 1.00E-157
Sim: 97.04%
 XP_026086546.1ankyrin repeat and BTB/POZ domain-containing protein BTBD11-B-like isoform X1
GO:0003677F:DNA binding
GO:0030527F:structural constituent of chromatin
GO:0046982F:protein heterodimerization activity
GO:0000786C:nucleosome
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002052548_137-3916
Len: 3,779 bp
Hits: 20
E-val: 0
Sim: 89.43%
 XP_018980297.1 LOW QUALITY PROTEIN: AT-hook DNA-binding motif-containing protein 1-like
GO:0003677F:DNA binding
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002052633_1304-3788
Len: 2,484 bp
Hits: 20
E-val: 8.70E-175
Sim: 86.42%
 XP_018934234.1 protein Jumonji-like
GO:0006338P:chromatin remodeling
GO:0010468P:regulation of gene expression
GO:0003677F:DNA binding
GO:0000785C:chromatin
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002052684_1-3521
Len: 3,520 bp
Hits: 20
E-val: 2.90E-54
Sim: 55.16%
 XP_018918970.1 LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC1
GO:0004842F:ubiquitin-protein transferase activity
GO:0016874F:ligase activity
DNA Metabolism
SRR941867_primary_scf7180002052722_2674-3312
Len: 638 bp
Hits: 8
E-val: 2.90E-13
Sim: 70.25%
 ROK31136.1putative ATP-dependent RNA helicase DDX27
GO:0002376P:immune system process
GO:0031048P:regulatory ncRNA-mediated heterochromatin formation
GO:0003676F:nucleic acid binding
GO:0003724F:RNA helicase activity
GO:0004386F:helicase activity
GO:0005524F:ATP binding
GO:0008270F:zinc ion binding
GO:0016787F:hydrolase activity
GO:0005634C:nucleus
GO:0005737C:cytoplasm
GO:0005829C:cytosol
GO:0031380C:nuclear RNA-directed RNA polymerase complex
DNA Metabolism
SRR941867_primary_scf7180002052775_2353-3063
Len: 710 bp
Hits: 20
E-val: 1.90E-21
Sim: 95.27%
 XP_026094013.1F-box/LRR-repeat protein 7-like isoform X1
GO:0031146P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0005737C:cytoplasm
GO:0019005C:SCF ubiquitin ligase complex
DNA Metabolism
SRR941867_primary_scf7180002052920_3049-4241
Len: 1,192 bp
Hits: 20
E-val: 1.10E-71
Sim: 56.95%
 ROL54130.1Lysine-specific demethylase 2B
GO:0006325P:chromatin organization
GO:0006338P:chromatin remodeling
GO:0032259P:methylation
GO:0003677F:DNA binding
GO:0005506F:iron ion binding
GO:0008168F:methyltransferase activity
GO:0008270F:zinc ion binding
GO:0051213F:dioxygenase activity
GO:0140680F:histone H3K36me/H3K36me2 demethylase activity
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002052927_144-2053
Len: 1,909 bp
Hits: 20
E-val: 1.30E-114
Sim: 95.34%
 XP_018935895.1 receptor-type tyrosine-protein phosphatase delta-like
GO:0006338P:chromatin remodeling
GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity
GO:0030946F:protein tyrosine phosphatase activity, metal-dependent
GO:0140793F:histone H2AXY142 phosphatase activity
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002053185_1-3687
Len: 3,686 bp
Hits: 20
E-val: 1.50E-122
Sim: 82.29%
 XP_018958349.1 F-box/LRR-repeat protein 19-like isoform X2
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
DNA Metabolism
SRR941867_primary_scf7180002053402_1-814
Len: 813 bp
Hits: 20
E-val: 2.20E-135
Sim: 93.83%
 XP_018936251.1 mitochondrial ubiquitin ligase activator of nfkb 1-A
GO:0000266P:mitochondrial fission
GO:0016567P:protein ubiquitination
GO:0043123P:positive regulation of canonical NF-kappaB signal transduction
GO:0051646P:mitochondrion localization
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0042802F:identical protein binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005741C:mitochondrial outer membrane
GO:0005777C:peroxisome
DNA Metabolism
SRR941867_primary_scf7180002053622_1-4050
Len: 4,049 bp
Hits: 20
E-val: 3.30E-14
Sim: 90.65%
 XP_026123970.1acyl-CoA synthetase family member 3, mitochondrial isoform X1
GO:0006633P:fatty acid biosynthetic process
GO:0031956F:medium-chain fatty acid-CoA ligase activity
GO:0005739C:mitochondrion
DNA Metabolism
SRR941867_primary_scf7180002053708_1-2840
Len: 2,839 bp
Hits: 20
E-val: 7.00E-120
Sim: 50.13%
 XP_018939293.1 LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 15-like
GO:0016567P:protein ubiquitination
GO:0080008C:Cul4-RING E3 ubiquitin ligase complex
DNA Metabolism
SRR941867_primary_scf7180002054188_900-3042
Len: 2,142 bp
Hits: 20
E-val: 5.60E-29
Sim: 93.64%
 XP_018922551.1 F-box only protein 6-like
GO:0006516P:glycoprotein catabolic process
GO:0031146P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0036503P:ERAD pathway
GO:0061630F:ubiquitin protein ligase activity
GO:0005737C:cytoplasm
GO:0019005C:SCF ubiquitin ligase complex
DNA Metabolism
SRR941867_primary_scf7180002054896_1-2473
Len: 2,472 bp
Hits: 20
E-val: 2.30E-82
Sim: 52.32%
 ROL44936.1E3 SUMO-protein ligase KIAA1586
GO:0016874F:ligase activity
GO:0046983F:protein dimerization activity
DNA Metabolism
SRR941867_primary_scf7180002054911_235-3733
Len: 3,498 bp
Hits: 20
E-val: 1.70E-43
Sim: 71.78%
 CAF96867.1unnamed protein product, partial
GO:0006260P:DNA replication
GO:0006265P:DNA topological change
GO:0007059P:chromosome segregation
GO:0048511P:rhythmic process
GO:0003677F:DNA binding
GO:0003917F:DNA topoisomerase type I (single strand cut, ATP-independent) activity
GO:0005694C:chromosome
GO:0005730C:nucleolus
DNA Metabolism
SRR941867_primary_scf7180002055681_1-2411
Len: 2,410 bp
Hits: 20
E-val: 2.30E-39
Sim: 73.19%
 XP_018956749.1 protein SET-like
GO:0003682F:chromatin binding
GO:0042393F:histone binding
GO:0000785C:chromatin
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002055907_2237-3044
Len: 807 bp
Hits: 20
E-val: 7.80E-16
Sim: 100%
 XP_009574312.1 LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
GO:0006397P:mRNA processing
GO:0008380P:RNA splicing
GO:0036303P:lymph vessel morphogenesis
GO:0048514P:blood vessel morphogenesis
GO:0048565P:digestive tract development
GO:0060216P:definitive hemopoiesis
GO:0003723F:RNA binding
GO:0003724F:RNA helicase activity
GO:0005524F:ATP binding
GO:0016787F:hydrolase activity
GO:0005681C:spliceosomal complex
DNA Metabolism
SRR941867_primary_scf7180002055981_1-977
Len: 976 bp
Hits: 20
E-val: 4.70E-31
Sim: 94.04%
 XP_018967889.1 homologous-pairing protein 2 homolog isoform X1
GO:0000709P:meiotic joint molecule formation
GO:0007129P:homologous chromosome pairing at meiosis
GO:0010774P:meiotic strand invasion involved in reciprocal meiotic recombination
GO:0003690F:double-stranded DNA binding
GO:0120230F:recombinase activator activity
GO:0000794C:condensed nuclear chromosome
GO:0120231C:DNA recombinase auxiliary factor complex
DNA Metabolism
SRR941867_primary_scf7180002056055_2365-2949
Len: 584 bp
Hits: 20
E-val: 1.70E-100
Sim: 89.7%
 XP_016303264.1 probable proline--tRNA ligase, mitochondrial
GO:0006433P:prolyl-tRNA aminoacylation
GO:0004827F:proline-tRNA ligase activity
GO:0005524F:ATP binding
GO:0005739C:mitochondrion
DNA Metabolism
SRR941867_primary_scf7180002056570_1-2069
Len: 2,068 bp
Hits: 20
E-val: 6.40E-30
Sim: 99.86%
 RXN21371.1spermatid perinuclear RNA-binding -like isoform X4
GO:0007283P:spermatogenesis
GO:0030154P:cell differentiation
GO:0003677F:DNA binding
GO:0003725F:double-stranded RNA binding
GO:0003727F:single-stranded RNA binding
GO:0005737C:cytoplasm
GO:0071011C:precatalytic spliceosome
DNA Metabolism