Gene Function: DNA Metabolism

Functional and statistical data for significant genes

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Showing 1,023 results (Page 17 of 41)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR941867_primary_scf7180002057587_187-1313
Len: 1,126 bp
Hits: 20
E-val: 1.30E-117
Sim: 95.83%
 XP_018967110.1 endonuclease domain-containing 1 protein-like
GO:0003676F:nucleic acid binding
GO:0004519F:endonuclease activity
GO:0016787F:hydrolase activity
GO:0046872F:metal ion binding
DNA Metabolism
SRR941867_primary_scf7180002057832_1-1104
Len: 1,103 bp
Hits: 20
E-val: 1.10E-33
Sim: 63.27%
 XP_026147411.1E3 UFM1-protein ligase 1
GO:0032434P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0034976P:response to endoplasmic reticulum stress
GO:1990592P:protein K69-linked ufmylation
GO:0061666F:UFM1 ligase activity
GO:0005789C:endoplasmic reticulum membrane
DNA Metabolism
SRR941867_primary_scf7180002057919_796-1197
Len: 401 bp
Hits: 20
E-val: 1.60E-38
Sim: 81.71%
 RXN15671.1zinc finger BED domain-containing 1-like protein
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
GO:0046983F:protein dimerization activity
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002060376_673-2160
Len: 1,487 bp
Hits: 20
E-val: 4.30E-294
Sim: 97.99%
 XP_018972974.1 kelch repeat and BTB domain-containing protein 2-like
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:1990756F:ubiquitin-like ligase-substrate adaptor activity
GO:0005737C:cytoplasm
GO:0031463C:Cul3-RING ubiquitin ligase complex
DNA Metabolism
SRR941867_primary_scf7180002060552_1-1197
Len: 1,196 bp
Hits: 20
E-val: 6.50E-59
Sim: 63.02%
 XP_026126245.1putative helicase mov-10-B.2
GO:0031047P:regulatory ncRNA-mediated gene silencing
GO:0003724F:RNA helicase activity
GO:0005488F:binding
GO:0036464C:cytoplasmic ribonucleoprotein granule
DNA Metabolism
SRR941867_primary_scf7180002060614_16-636
Len: 620 bp
Hits: 20
E-val: 1.00E-79
Sim: 71.93%
 XP_015460365.2activating transcription factor 7-interacting protein 2 isoform X2
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002060769_1-1572
Len: 1,571 bp
Hits: 20
E-val: 1.40E-53
Sim: 85.05%
 ROL46141.1Transposable element Tc1 transposase
GO:0006313P:DNA transposition
GO:0006338P:chromatin remodeling
GO:0007018P:microtubule-based movement
GO:0015074P:DNA integration
GO:0003677F:DNA binding
GO:0005524F:ATP binding
GO:0008569F:minus-end-directed microtubule motor activity
GO:0010485F:histone H4 acetyltransferase activity
GO:0016887F:ATP hydrolysis activity
GO:0043998F:histone H2A acetyltransferase activity
GO:0045505F:dynein intermediate chain binding
GO:0051959F:dynein light intermediate chain binding
GO:1990189F:protein N-terminal-serine acetyltransferase activity
GO:0005634C:nucleus
GO:0005737C:cytoplasm
GO:0005874C:microtubule
GO:0016020C:membrane
GO:0030286C:dynein complex
GO:0031514C:motile cilium
DNA Metabolism
SRR941867_primary_scf7180002061720_342-796
Len: 454 bp
Hits: 20
E-val: 5.90E-45
Sim: 99.62%
 XP_018962119.1 LOW QUALITY PROTEIN: ubiquitin-protein ligase E3C-like
GO:0000209P:protein polyubiquitination
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016874F:ligase activity
GO:0061630F:ubiquitin protein ligase activity
DNA Metabolism
SRR941867_primary_scf7180002062192_1-1935
Len: 1,934 bp
Hits: 20
E-val: 2.10E-43
Sim: 55.28%
 RXN20617.1cullin-9 isoform X1
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0016740F:transferase activity
GO:0031625F:ubiquitin protein ligase binding
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002062837_232-1597
Len: 1,365 bp
Hits: 20
E-val: 2.30E-44
Sim: 56.81%
 RXN11018.1ankyrin repeat and BTB POZ domain-containing BTBD11-A isoform X1
GO:0003677F:DNA binding
GO:0030527F:structural constituent of chromatin
GO:0046982F:protein heterodimerization activity
GO:0000786C:nucleosome
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002063148_1-1321
Len: 1,320 bp
Hits: 20
E-val: 1.70E-23
Sim: 91.04%
 XP_016107991.1 receptor-type tyrosine-protein phosphatase U-like
GO:0001757P:somite specification
GO:0006338P:chromatin remodeling
GO:0007155P:cell adhesion
GO:0007165P:signal transduction
GO:0031175P:neuron projection development
GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity
GO:0030946F:protein tyrosine phosphatase activity, metal-dependent
GO:0140793F:histone H2AXY142 phosphatase activity
GO:0005886C:plasma membrane
GO:0070161C:anchoring junction
DNA Metabolism
SRR941867_primary_scf7180002063499_483-1285
Len: 802 bp
Hits: 20
E-val: 8.30E-135
Sim: 95.49%
 XP_016126603.1 E3 ubiquitin-protein ligase PDZRN3-like
GO:0007528P:neuromuscular junction development
GO:0016567P:protein ubiquitination
GO:0043122P:regulation of canonical NF-kappaB signal transduction
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0061630F:ubiquitin protein ligase activity
GO:0005737C:cytoplasm
GO:0045202C:synapse
DNA Metabolism
SRR941867_primary_scf7180002063674_1-1414
Len: 1,413 bp
Hits: 20
E-val: 9.30E-89
Sim: 61.18%
 XP_026128916.1chromodomain-helicase-DNA-binding protein 1-like isoform X1
GO:0003678F:DNA helicase activity
GO:0005488F:binding
DNA Metabolism
SRR941867_primary_scf7180002064267_1-1544
Len: 1,543 bp
Hits: 20
E-val: 1.40E-18
Sim: 99.71%
 XP_026078574.1probable E3 ubiquitin-protein ligase HECTD2 isoform X1
GO:0000209P:protein polyubiquitination
GO:0016874F:ligase activity
GO:0061630F:ubiquitin protein ligase activity
DNA Metabolism
SRR941867_primary_scf7180002065398_1-1958
Len: 1,957 bp
Hits: 20
E-val: 7.00E-18
Sim: 92.59%
 ROI27773.1putative ATP-dependent RNA helicase DDX31
GO:0042254P:ribosome biogenesis
GO:0003723F:RNA binding
GO:0003724F:RNA helicase activity
GO:0005524F:ATP binding
GO:0016887F:ATP hydrolysis activity
GO:0005634C:nucleus
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002066707_1-1476
Len: 1,475 bp
Hits: 20
E-val: 7.20E-76
Sim: 95.59%
 XP_016428802.1 protein FAM172A-like isoform X1
GO:0006397P:mRNA processing
GO:0008380P:RNA splicing
GO:0031048P:regulatory ncRNA-mediated heterochromatin formation
GO:0035197F:siRNA binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002075531_1-1031
Len: 1,030 bp
Hits: 20
E-val: 4.60E-21
Sim: 97.68%
 RXN16629.1trifunctional purine biosynthetic adenosine-3
GO:0006189P:'de novo' IMP biosynthetic process
GO:0043009P:chordate embryonic development
GO:0043010P:camera-type eye development
GO:0043473P:pigmentation
GO:0046084P:adenine biosynthetic process
GO:0004637F:phosphoribosylamine-glycine ligase activity
GO:0004641F:phosphoribosylformylglycinamidine cyclo-ligase activity
GO:0004644F:phosphoribosylglycinamide formyltransferase activity
GO:0005524F:ATP binding
GO:0046872F:metal ion binding
GO:0005829C:cytosol
DNA Metabolism
SRR941867_primary_scf7180002080205_1-1678
Len: 1,677 bp
Hits: 20
E-val: 7.10E-19
Sim: 95.04%
 XP_026122620.1chromodomain-helicase-DNA-binding protein 3-like
GO:0006338P:chromatin remodeling
GO:0007417P:central nervous system development
GO:0048589P:developmental growth
GO:0003677F:DNA binding
GO:0003682F:chromatin binding
GO:0005524F:ATP binding
GO:0008270F:zinc ion binding
GO:0009378F:four-way junction helicase activity
GO:0016887F:ATP hydrolysis activity
GO:0036121F:double-stranded DNA helicase activity
GO:0042393F:histone binding
GO:0061749F:forked DNA-dependent helicase activity
GO:0140658F:ATP-dependent chromatin remodeler activity
GO:1990518F:single-stranded 3'-5' DNA helicase activity
GO:0016581C:NuRD complex
DNA Metabolism
SRR941867_primary_scf7180002080412_1874-3958
Len: 2,084 bp
Hits: 20
E-val: 7.80E-185
Sim: 54.23%
 XP_018930492.1 protein FAM46A-like
GO:0048255P:mRNA stabilization
GO:0003723F:RNA binding
GO:1990817F:poly(A) RNA polymerase activity
GO:0005575C:cellular_component
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002080791_1-3194
Len: 3,193 bp
Hits: 20
E-val: 3.20E-28
Sim: 94.62%
 XP_016363490.1 protein MMS22-like
GO:0000724P:double-strand break repair via homologous recombination
GO:0006325P:chromatin organization
GO:0031297P:replication fork processing
GO:0003697F:single-stranded DNA binding
GO:0035101C:FACT complex
GO:0042555C:MCM complex
GO:0043596C:nuclear replication fork
GO:0090734C:site of DNA damage
DNA Metabolism
SRR941867_primary_scf7180002081901_1-868
Len: 867 bp
Hits: 20
E-val: 9.90E-25
Sim: 93.4%
 XP_026058504.1calcineurin-binding protein cabin-1 isoform X2
GO:0006281P:DNA repair
GO:0006325P:chromatin organization
GO:0031491F:nucleosome binding
GO:0005634C:nucleus
GO:0005694C:chromosome
DNA Metabolism
SRR941867_primary_scf7180002082907_1-2695
Len: 2,694 bp
Hits: 20
E-val: 9.70E-87
Sim: 74.33%
 XP_018962150.1 apoptosis-resistant E3 ubiquitin protein ligase 1-like
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0043066P:negative regulation of apoptotic process
GO:0061630F:ubiquitin protein ligase activity
GO:0005829C:cytosol
DNA Metabolism
SRR941867_primary_scf7180002083406_749-2488
Len: 1,739 bp
Hits: 20
E-val: 4.40E-32
Sim: 52.05%
 XP_016347880.1 WD repeat and HMG-box DNA-binding protein 1-like
GO:0000278P:mitotic cell cycle
GO:0006261P:DNA-templated DNA replication
GO:0006281P:DNA repair
GO:0003677F:DNA binding
GO:0003682F:chromatin binding
GO:0005634C:nucleus
GO:0043596C:nuclear replication fork
DNA Metabolism
SRR941867_primary_scf7180002083940_384-2243
Len: 1,859 bp
Hits: 20
E-val: 9.40E-291
Sim: 86.55%
 XP_018950568.1 LOW QUALITY PROTEIN: transcriptional regulator ATRX-like
GO:0006281P:DNA repair
GO:0006338P:chromatin remodeling
GO:0010468P:regulation of gene expression
GO:0010558P:negative regulation of macromolecule biosynthetic process
GO:0031297P:replication fork processing
GO:0005524F:ATP binding
GO:0008270F:zinc ion binding
GO:0009378F:four-way junction helicase activity
GO:0016787F:hydrolase activity
GO:0031490F:chromatin DNA binding
GO:0036121F:double-stranded DNA helicase activity
GO:0061749F:forked DNA-dependent helicase activity
GO:1990518F:single-stranded 3'-5' DNA helicase activity
GO:0000781C:chromosome, telomeric region
GO:0005634C:nucleus
GO:0005721C:pericentric heterochromatin
DNA Metabolism
SRR941867_primary_scf7180002084283_1-739
Len: 738 bp
Hits: 20
E-val: 1.40E-32
Sim: 96.86%
 XP_026095882.1ankyrin repeat and BTB/POZ domain-containing protein BTBD11-A isoform X1
GO:0003677F:DNA binding
GO:0030527F:structural constituent of chromatin
GO:0046982F:protein heterodimerization activity
GO:0000786C:nucleosome
DNA Metabolism