Gene Function: DNA Metabolism

Functional and statistical data for significant genes

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Showing 1,023 results (Page 3 of 41)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR924327_primary_scf7180002252823_1-955
Len: 954 bp
Hits: 20
E-val: 2.10E-15
Sim: 98.33%
 XP_026071459.1pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like
GO:0006397P:mRNA processing
GO:0008380P:RNA splicing
GO:0036303P:lymph vessel morphogenesis
GO:0048514P:blood vessel morphogenesis
GO:0048565P:digestive tract development
GO:0060216P:definitive hemopoiesis
GO:0003723F:RNA binding
GO:0003724F:RNA helicase activity
GO:0005524F:ATP binding
GO:0016787F:hydrolase activity
GO:0005681C:spliceosomal complex
DNA Metabolism
SRR924327_primary_scf7180002254239_1-928
Len: 927 bp
Hits: 20
E-val: 1.10E-40
Sim: 53.89%
 XP_016104711.1 cullin-9-like
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0016740F:transferase activity
GO:0031625F:ubiquitin protein ligase binding
GO:0005737C:cytoplasm
DNA Metabolism
SRR924327_primary_scf7180002271842_576-2452
Len: 1,876 bp
Hits: 20
E-val: 4.00E-249
Sim: 89.59%
 XP_018938119.1 histone-lysine N-methyltransferase SETD1B-A-like
GO:0002244P:hematopoietic progenitor cell differentiation
GO:0006338P:chromatin remodeling
GO:0032259P:methylation
GO:0003723F:RNA binding
GO:0140999F:histone H3K4 trimethyltransferase activity
GO:0005694C:chromosome
GO:0005737C:cytoplasm
GO:0016607C:nuclear speck
GO:0048188C:Set1C/COMPASS complex
DNA Metabolism
SRR924327_primary_scf7180002272003_1-1606
Len: 1,605 bp
Hits: 20
E-val: 8.50E-22
Sim: 99.91%
 XP_026138231.1small G protein signaling modulator 2-like isoform X5
GO:0016567P:protein ubiquitination
GO:0035024P:negative regulation of Rho protein signal transduction
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051260P:protein homooligomerization
GO:0004842F:ubiquitin-protein transferase activity
GO:0005096F:GTPase activator activity
GO:0005634C:nucleus
GO:0005768C:endosome
GO:0031463C:Cul3-RING ubiquitin ligase complex
DNA Metabolism
SRR924327_primary_scf7180002272017_103-1676
Len: 1,573 bp
Hits: 20
E-val: 1.20E-185
Sim: 69.89%
 XP_026133003.1zinc finger BED domain-containing protein 1-like
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
GO:0046983F:protein dimerization activity
GO:0005634C:nucleus
DNA Metabolism
SRR924327_primary_scf7180002272131_63-2251
Len: 2,188 bp
Hits: 20
E-val: 1.10E-14
Sim: 92.48%
 XP_026099952.1myotubularin-related protein 4-like isoform X2
GO:0006338P:chromatin remodeling
GO:0010506P:regulation of autophagy
GO:0046856P:phosphatidylinositol dephosphorylation
GO:0004438F:phosphatidylinositol-3-phosphate phosphatase activity
GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity
GO:0008270F:zinc ion binding
GO:0019903F:protein phosphatase binding
GO:0030946F:protein tyrosine phosphatase activity, metal-dependent
GO:0052629F:phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity
GO:0140793F:histone H2AXY142 phosphatase activity
GO:0005737C:cytoplasm
GO:0012505C:endomembrane system
GO:0016020C:membrane
DNA Metabolism
SRR924327_primary_scf7180002272163_407-2532
Len: 2,125 bp
Hits: 20
E-val: 2.70E-39
Sim: 71.42%
 RXN22211.1DNA replication licensing factor MCM7
GO:0006261P:DNA-templated DNA replication
GO:0003677F:DNA binding
GO:0016787F:hydrolase activity
GO:0017116F:single-stranded DNA helicase activity
DNA Metabolism
SRR924327_primary_scf7180002272290_310-1573
Len: 1,263 bp
Hits: 20
E-val: 2.10E-52
Sim: 51.55%
 XP_016303909.1 probable ATP-dependent RNA helicase DDX4
GO:0003676F:nucleic acid binding
GO:0003724F:RNA helicase activity
GO:0004386F:helicase activity
GO:0005524F:ATP binding
GO:0016787F:hydrolase activity
DNA Metabolism
SRR924327_primary_scf7180002273756_5-1690
Len: 1,685 bp
Hits: 20
E-val: 4.30E-32
Sim: 71.9%
 XP_019211574.1zinc finger BED domain-containing protein 1-like
GO:0003677F:DNA binding
GO:0003824F:catalytic activity
GO:0008270F:zinc ion binding
GO:0046983F:protein dimerization activity
GO:0005634C:nucleus
DNA Metabolism
SRR924327_primary_scf7180002274503_1-989
Len: 988 bp
Hits: 20
E-val: 4.00E-115
Sim: 92.04%
 XP_018924755.1 deubiquitinating protein VCIP135-like
GO:0016320P:endoplasmic reticulum membrane fusion
GO:0016567P:protein ubiquitination
GO:0035871P:protein K11-linked deubiquitination
GO:0071108P:protein K48-linked deubiquitination
GO:0090168P:Golgi reassembly
GO:0106300P:protein-DNA covalent cross-linking repair
GO:1904888P:cranial skeletal system development
GO:0004843F:cysteine-type deubiquitinase activity
DNA Metabolism
SRR924327_primary_scf7180002274524_1-1343
Len: 1,342 bp
Hits: 20
E-val: 4.70E-50
Sim: 95.58%
 XP_018980714.1 helicase SKI2W-like
GO:0070478P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay
GO:0003723F:RNA binding
GO:0003724F:RNA helicase activity
GO:0005524F:ATP binding
GO:0016787F:hydrolase activity
GO:0055087C:Ski complex
DNA Metabolism
SRR924327_primary_scf7180002274843_1-1283
Len: 1,282 bp
Hits: 20
E-val: 2.90E-166
Sim: 89.41%
 XP_018940013.1 LOW QUALITY PROTEIN: RING finger protein 37-like
GO:0000209P:protein polyubiquitination
GO:0007165P:signal transduction
GO:0005185F:neurohypophyseal hormone activity
GO:0008270F:zinc ion binding
GO:0031625F:ubiquitin protein ligase binding
GO:0034450F:ubiquitin-ubiquitin ligase activity
GO:0005576C:extracellular region
GO:0005634C:nucleus
DNA Metabolism
SRR924327_primary_scf7180002275246_237-587
Len: 350 bp
Hits: 20
E-val: 5.20E-41
Sim: 89.38%
 XP_016300055.1 putative nuclease HARBI1
GO:0004518F:nuclease activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
GO:0016020C:membrane
DNA Metabolism
SRR924327_primary_scf7180002275286_89-937
Len: 848 bp
Hits: 20
E-val: 1.70E-154
Sim: 85.33%
 XP_018966491.1 kelch-like protein 35
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:1990756F:ubiquitin-like ligase-substrate adaptor activity
GO:0005737C:cytoplasm
GO:0031463C:Cul3-RING ubiquitin ligase complex
DNA Metabolism
SRR924327_primary_scf7180002275610_1-513
Len: 512 bp
Hits: 20
E-val: 2.50E-07
Sim: 87.07%
 XP_016417691.1 biotin--protein ligase
GO:0036211P:protein modification process
GO:0004077F:biotin--[biotin carboxyl-carrier protein] ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR924327_primary_scf7180002277795_1-1012
Len: 1,011 bp
Hits: 7
E-val: 6.80E-09
Sim: 83.71%
 XP_016388565.1 tubulin polyglutamylase TTLL5
GO:0000226P:microtubule cytoskeleton organization
GO:0007288P:sperm axoneme assembly
GO:0036211P:protein modification process
GO:0015631F:tubulin binding
GO:0016874F:ligase activity
GO:0070740F:tubulin-glutamic acid ligase activity
GO:0036064C:ciliary basal body
DNA Metabolism
SRR924327_primary_scf7180002280195_1-1398
Len: 1,397 bp
Hits: 20
E-val: 3.60E-93
Sim: 67.51%
 XP_016399706.1 cat eye syndrome critical region protein 2-like isoform X1
GO:0006338P:chromatin remodeling
GO:0007338P:single fertilization
GO:0005634C:nucleus
GO:0090537C:CERF complex
DNA Metabolism
SRR924327_primary_scf7180002282078_1-726
Len: 725 bp
Hits: 20
E-val: 7.70E-23
Sim: 78.24%
 ROI48961.1Superkiller viralicidic activity 2-like 2
GO:0000460P:maturation of 5.8S rRNA
GO:0006401P:RNA catabolic process
GO:0031101P:fin regeneration
GO:0051781P:positive regulation of cell division
GO:0003723F:RNA binding
GO:0003724F:RNA helicase activity
GO:0005524F:ATP binding
GO:0016787F:hydrolase activity
GO:0031499C:TRAMP complex
DNA Metabolism
SRR924327_primary_scf7180002289107_1-949
Len: 948 bp
Hits: 20
E-val: 3.40E-26
Sim: 51.36%
 XP_016420260.1 ubinuclein-1-like isoform X1
GO:0006325P:chromatin organization
GO:0005634C:nucleus
DNA Metabolism
SRR924327_primary_scf7180002292669_141-1152
Len: 1,011 bp
Hits: 20
E-val: 8.30E-31
Sim: 85.29%
 XP_016323409.1 poly(ADP-ribose) glycohydrolase ARH3-like
GO:0006281P:DNA repair
GO:0060546P:negative regulation of necroptotic process
GO:0140290P:peptidyl-serine ADP-deribosylation
GO:0000287F:magnesium ion binding
GO:0004649F:poly(ADP-ribose) glycohydrolase activity
GO:0061463F:O-acetyl-ADP-ribose deacetylase activity
GO:0140292F:ADP-ribosylserine hydrolase activity
GO:0005634C:nucleus
GO:0005759C:mitochondrial matrix
GO:0090734C:site of DNA damage
DNA Metabolism
SRR924327_primary_scf7180002335757_1-1056
Len: 1,055 bp
Hits: 20
E-val: 3.00E-193
Sim: 74.54%
 XP_018926874.1 E3 ubiquitin-protein ligase NHLRC1
GO:0000209P:protein polyubiquitination
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0061630F:ubiquitin protein ligase activity
DNA Metabolism
SRR924327_primary_scf7180002335931_250-1365
Len: 1,115 bp
Hits: 20
E-val: 1.40E-34
Sim: 60.35%
 XP_018970859.1 NEDD4-like E3 ubiquitin-protein ligase WWP1
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0003824F:catalytic activity
GO:0004842F:ubiquitin-protein transferase activity
GO:0016740F:transferase activity
GO:0035091F:phosphatidylinositol binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR924327_primary_scf7180002336110_1-1816
Len: 1,815 bp
Hits: 20
E-val: 8.50E-103
Sim: 79.34%
 XP_016110568.1 receptor-type tyrosine-protein phosphatase S-like
GO:0006338P:chromatin remodeling
GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity
GO:0030946F:protein tyrosine phosphatase activity, metal-dependent
GO:0140793F:histone H2AXY142 phosphatase activity
GO:0016020C:membrane
DNA Metabolism
SRR924327_primary_scf7180002336766_1-1442
Len: 1,441 bp
Hits: 20
E-val: 2.10E-24
Sim: 96.91%
 XP_016101759.1 LOW QUALITY PROTEIN: isoleucine--tRNA ligase, cytoplasmic
GO:0006428P:isoleucyl-tRNA aminoacylation
GO:0106074P:aminoacyl-tRNA metabolism involved in translational fidelity
GO:1903670P:regulation of sprouting angiogenesis
GO:0000049F:tRNA binding
GO:0002161F:aminoacyl-tRNA deacylase activity
GO:0004822F:isoleucine-tRNA ligase activity
GO:0005524F:ATP binding
DNA Metabolism
SRR924327_primary_scf7180002336877_1-1580
Len: 1,579 bp
Hits: 20
E-val: 9.90E-265
Sim: 99.27%
 XP_018936117.1 kelch-like protein 25 isoform X3
GO:0006417P:regulation of translation
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0005737C:cytoplasm
GO:0031463C:Cul3-RING ubiquitin ligase complex
DNA Metabolism