Gene Function: DNA Metabolism

Functional and statistical data for significant genes

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Showing 1,023 results (Page 7 of 41)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR924333_primary_scf7180001594739_212-1003
Len: 791 bp
Hits: 20
E-val: 1.60E-127
Sim: 66.19%
 RXN26735.1Transposon Ty3-G Gag-Pol poly
GO:0015074P:DNA integration
GO:0003676F:nucleic acid binding
DNA Metabolism
SRR924334_primary_scf7180002196937_1-4749
Len: 4,748 bp
Hits: 20
E-val: 1.10E-287
Sim: 55.17%
 BAC82611.1pol-like protein
GO:0006260P:DNA replication
GO:0006278P:RNA-templated DNA biosynthetic process
GO:0071897P:DNA biosynthetic process
GO:0000166F:nucleotide binding
GO:0003676F:nucleic acid binding
GO:0003677F:DNA binding
GO:0003824F:catalytic activity
GO:0003887F:DNA-directed DNA polymerase activity
GO:0003964F:RNA-directed DNA polymerase activity
GO:0008270F:zinc ion binding
DNA Metabolism
SRR924334_primary_scf7180002197282_262-708
Len: 446 bp
Hits: 20
E-val: 5.20E-54
Sim: 88.03%
 ROK54656.1DNA transposase THAP9
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
GO:0016020C:membrane
DNA Metabolism
SRR924334_primary_scf7180002197596_256-1098
Len: 842 bp
Hits: 20
E-val: 8.00E-88
Sim: 72.13%
 RXN31220.1putative transposase element L1Md-A101/L1Md-A102/L1Md-A2
GO:0015074P:DNA integration
GO:0003676F:nucleic acid binding
GO:0016020C:membrane
DNA Metabolism
SRR924334_primary_scf7180002198462_146-763
Len: 617 bp
Hits: 20
E-val: 3.60E-45
Sim: 92.89%
 XP_016329850.1 histone H1-like
GO:0006334P:nucleosome assembly
GO:0042981P:regulation of apoptotic process
GO:0003677F:DNA binding
GO:0030527F:structural constituent of chromatin
GO:0000786C:nucleosome
GO:0005634C:nucleus
DNA Metabolism
SRR924334_primary_scf7180002205438_48-1355
Len: 1,307 bp
Hits: 20
E-val: 5.40E-184
Sim: 81.77%
 XP_005751641.1 pogo transposable element with KRAB domain
GO:0003677F:DNA binding
GO:0005634C:nucleus
DNA Metabolism
SRR924338_primary_scf7180002453455_1-1654
Len: 1,653 bp
Hits: 20
E-val: 2.30E-179
Sim: 72.38%
 ROI84226.1Transposon Tf2-9 polyprotein
GO:0015074P:DNA integration
GO:0003676F:nucleic acid binding
GO:0140640F:catalytic activity, acting on a nucleic acid
DNA Metabolism
SRR924338_primary_scf7180002453812_17-1588
Len: 1,571 bp
Hits: 20
E-val: 3.00E-48
Sim: 76.92%
 XP_026117511.1U5 small nuclear ribonucleoprotein 200 kDa helicase
GO:0000388P:spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)
GO:0003724F:RNA helicase activity
GO:0005488F:binding
GO:0016787F:hydrolase activity
GO:0005681C:spliceosomal complex
DNA Metabolism
SRR924338_primary_scf7180002454346_413-1778
Len: 1,365 bp
Hits: 20
E-val: 1.40E-70
Sim: 76.27%
 XP_018931511.1 putative nuclease HARBI1
GO:0004518F:nuclease activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
GO:0016020C:membrane
DNA Metabolism
SRR924338_primary_scf7180002454426_621-1238
Len: 617 bp
Hits: 20
E-val: 1.70E-47
Sim: 90.85%
 XP_016382104.1 histone H1-like
GO:0006334P:nucleosome assembly
GO:0042981P:regulation of apoptotic process
GO:0003677F:DNA binding
GO:0030527F:structural constituent of chromatin
GO:0000786C:nucleosome
GO:0005634C:nucleus
DNA Metabolism
SRR924338_primary_scf7180002454809_281-1966
Len: 1,685 bp
Hits: 20
E-val: 5.10E-235
Sim: 72.64%
 BAC82621.1pol-like protein
GO:0006278P:RNA-templated DNA biosynthetic process
GO:0003964F:RNA-directed DNA polymerase activity
DNA Metabolism
SRR924338_primary_scf7180002455600_372-1577
Len: 1,205 bp
Hits: 20
E-val: 2.30E-43
Sim: 56.21%
 XP_018956749.1 protein SET-like
GO:0006334P:nucleosome assembly
GO:0003682F:chromatin binding
GO:0042393F:histone binding
GO:0000785C:chromatin
GO:0005634C:nucleus
DNA Metabolism
SRR924338_primary_scf7180002458797_485-1137
Len: 652 bp
Hits: 20
E-val: 1.80E-119
Sim: 78.31%
 RXN37624.1nuclease HARBI1
GO:0004518F:nuclease activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
DNA Metabolism
SRR924338_primary_scf7180002458863_278-1427
Len: 1,149 bp
Hits: 20
E-val: 1.50E-33
Sim: 93.95%
 XP_016367374.1 tyrosine-protein phosphatase non-receptor type 21-like
GO:0001756P:somitogenesis
GO:0001837P:epithelial to mesenchymal transition
GO:0003007P:heart morphogenesis
GO:0006338P:chromatin remodeling
GO:0007339P:binding of sperm to zona pellucida
GO:0035803P:egg coat formation
GO:2000344P:positive regulation of acrosome reaction
GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity
GO:0030946F:protein tyrosine phosphatase activity, metal-dependent
GO:0032190F:acrosin binding
GO:0140793F:histone H2AXY142 phosphatase activity
GO:0005737C:cytoplasm
GO:0005856C:cytoskeleton
GO:0031012C:extracellular matrix
DNA Metabolism
SRR924338_primary_scf7180002458903_320-865
Len: 545 bp
Hits: 20
E-val: 3.40E-100
Sim: 89.63%
 XP_018941090.1 E3 ubiquitin-protein ligase TRIM21-like
GO:0045087P:innate immune response
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR924338_primary_scf7180002458993_1-1723
Len: 1,722 bp
Hits: 20
E-val: 3.30E-40
Sim: 94.08%
 XP_016134667.1 cytokine receptor-like factor 3
GO:0003677F:DNA binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
DNA Metabolism
SRR924338_primary_scf7180002460102_331-1169
Len: 838 bp
Hits: 20
E-val: 2.70E-104
Sim: 60.22%
 ROL46693.1Pogo transposable element with KRAB domain
GO:0003677F:DNA binding
GO:0110165C:cellular anatomical structure
DNA Metabolism
SRR924338_primary_scf7180002461355_753-2042
Len: 1,289 bp
Hits: 20
E-val: 1.10E-242
Sim: 95.21%
 XP_018982106.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF139-like
GO:0036503P:ERAD pathway
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0036513C:Derlin-1 retrotranslocation complex
DNA Metabolism
SRR924338_primary_scf7180002462745_1-1303
Len: 1,302 bp
Hits: 20
E-val: 1.70E-121
Sim: 82.33%
 XP_018958349.1 F-box/LRR-repeat protein 19-like isoform X2
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
DNA Metabolism
SRR924338_primary_scf7180002462782_1-1388
Len: 1,387 bp
Hits: 20
E-val: 1.50E-30
Sim: 96.32%
 XP_016103592.1 5'-3' exoribonuclease 1-like
GO:0000956P:nuclear-transcribed mRNA catabolic process
GO:0016075P:rRNA catabolic process
GO:0003723F:RNA binding
GO:0004534F:5'-3' RNA exonuclease activity
GO:0005634C:nucleus
GO:0005737C:cytoplasm
GO:0016020C:membrane
DNA Metabolism
SRR924338_primary_scf7180002463228_1-1396
Len: 1,395 bp
Hits: 20
E-val: 1.70E-82
Sim: 50.94%
 XP_016129354.1 lymphocyte-specific helicase-like
GO:0006325P:chromatin organization
GO:0010468P:regulation of gene expression
DNA Metabolism
SRR924338_primary_scf7180002465155_1-266
Len: 265 bp
Hits: 20
E-val: 6.90E-38
Sim: 83.99%
 XP_018929016.1 LOW QUALITY PROTEIN: DNA-3-methyladenine glycosylase
GO:0006284P:base-excision repair
GO:0003677F:DNA binding
GO:0008725F:DNA-3-methyladenine glycosylase activity
GO:0043916F:DNA-7-methylguanine glycosylase activity
GO:0052821F:DNA-7-methyladenine glycosylase activity
GO:0052822F:DNA-3-methylguanine glycosylase activity
GO:1990053F:DNA-5-methylcytosine glycosylase activity
DNA Metabolism
SRR924338_primary_scf7180002465516_1-907
Len: 906 bp
Hits: 20
E-val: 2.60E-60
Sim: 79.15%
 XP_023286430.1E3 ubiquitin-protein ligase MYCBP2 isoform X5
GO:0007411P:axon guidance
GO:0008582P:regulation of synaptic assembly at neuromuscular junction
GO:0061630F:ubiquitin protein ligase activity
GO:0005634C:nucleus
GO:0005886C:plasma membrane
DNA Metabolism
SRR924338_primary_scf7180002469890_1-616
Len: 615 bp
Hits: 20
E-val: 1.30E-31
Sim: 69.62%
 XP_016114876.1 biotin--protein ligase isoform X1
GO:0004077F:biotin--[biotin carboxyl-carrier protein] ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR924338_primary_scf7180002470359_1-1346
Len: 1,345 bp
Hits: 20
E-val: 2.10E-29
Sim: 57.91%
 XP_026065638.1origin recognition complex subunit 5 isoform X1
GO:0006270P:DNA replication initiation
GO:0003688F:DNA replication origin binding
GO:0005664C:nuclear origin of replication recognition complex
DNA Metabolism