Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002020888_1-547
Len: 546 bp
Hits: 20
E-val: 1.50E-18
Sim: 83.41%
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XP_018919596.1 platelet-derived growth factor receptor beta-like |
GO:0001755P:neural crest cell migration GO:0001974P:blood vessel remodeling GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0014911P:positive regulation of smooth muscle cell migration GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0042060P:wound healing GO:0042246P:tissue regeneration GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0048702P:embryonic neurocranium morphogenesis GO:0050679P:positive regulation of epithelial cell proliferation GO:0051897P:positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:0060218P:hematopoietic stem cell differentiation GO:0060326P:cell chemotaxis GO:0060978P:angiogenesis involved in coronary vascular morphogenesis GO:0061300P:cerebellum vasculature development GO:0072109P:glomerular mesangium development GO:0097084P:vascular associated smooth muscle cell development GO:1904238P:pericyte cell differentiation GO:0003676F:nucleic acid binding GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0046872F:metal ion binding GO:0048407F:platelet-derived growth factor binding GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005886C:plasma membrane GO:0043235C:receptor complex |
Signal Transduction
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SRR953582_primary_scf7180002020888_1126-2981
Len: 1,855 bp
Hits: 20
E-val: 1.70E-45
Sim: 85.46%
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XP_018919596.1 platelet-derived growth factor receptor beta-like |
GO:0001755P:neural crest cell migration GO:0001974P:blood vessel remodeling GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0014911P:positive regulation of smooth muscle cell migration GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0042060P:wound healing GO:0042246P:tissue regeneration GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0048702P:embryonic neurocranium morphogenesis GO:0050679P:positive regulation of epithelial cell proliferation GO:0051897P:positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:0060218P:hematopoietic stem cell differentiation GO:0060326P:cell chemotaxis GO:0060978P:angiogenesis involved in coronary vascular morphogenesis GO:0061300P:cerebellum vasculature development GO:0072109P:glomerular mesangium development GO:0097084P:vascular associated smooth muscle cell development GO:1904238P:pericyte cell differentiation GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0046872F:metal ion binding GO:0048407F:platelet-derived growth factor binding GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005886C:plasma membrane GO:0043235C:receptor complex |
Signal Transduction
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SRR953582_primary_scf7180002021096_699-1405
Len: 706 bp
Hits: 20
E-val: 9.50E-42
Sim: 66.45%
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RXN19544.1serine threonine- kinase N1-like isoform X3 |
GO:0007165P:signal transduction GO:0004698F:calcium,diacylglycerol-dependent serine/threonine kinase activity GO:0004699F:diacylglycerol-dependent, calcium-independent serine/threonine kinase activity GO:0005524F:ATP binding GO:0031267F:small GTPase binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180002021479_1-1179
Len: 1,178 bp
Hits: 20
E-val: 1.40E-34
Sim: 93.62%
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XP_016306321.1 diacylglycerol kinase eta, partial |
GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0046486P:glycerolipid metabolic process GO:0004143F:ATP-dependent diacylglycerol kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005886C:plasma membrane |
Signal Transduction
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SRR953582_primary_scf7180002021993_1-1049
Len: 1,048 bp
Hits: 20
E-val: 3.90E-100
Sim: 87.88%
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XP_026139913.1triple functional domain protein-like isoform X2 |
GO:0006338P:chromatin remodeling GO:0007411P:axon guidance GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0019898C:extrinsic component of membrane |
Signal Transduction
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SRR953582_primary_scf7180002022293_416-1993
Len: 1,577 bp
Hits: 20
E-val: 1.10E-300
Sim: 95.67%
|
XP_018957960.1 suppressor of cytokine signaling 6-like isoform X1 |
GO:0009968P:negative regulation of signal transduction GO:0016567P:protein ubiquitination GO:0035556P:intracellular signal transduction GO:0040008P:regulation of growth GO:0046854P:phosphatidylinositol phosphate biosynthetic process GO:0035591F:signaling adaptor activity GO:0046935F:1-phosphatidylinositol-3-kinase regulator activity GO:0005576C:extracellular region GO:0005942C:phosphatidylinositol 3-kinase complex |
Signal Transduction
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SRR953582_primary_scf7180002022302_1462-2385
Len: 923 bp
Hits: 20
E-val: 8.00E-166
Sim: 94.78%
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XP_018963369.1 cyclin-dependent kinase 5 activator 1-like |
GO:0007411P:axon guidance GO:0007420P:brain development GO:0035622P:intrahepatic bile duct development GO:0048511P:rhythmic process GO:0016301F:kinase activity GO:0019901F:protein kinase binding GO:0061575F:cyclin-dependent protein serine/threonine kinase activator activity GO:0005634C:nucleus GO:0005886C:plasma membrane GO:0016533C:protein kinase 5 complex GO:0030426C:growth cone GO:0043204C:perikaryon GO:0048471C:perinuclear region of cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180002022326_1-1569
Len: 1,568 bp
Hits: 20
E-val: 7.00E-21
Sim: 96.64%
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RXN30899.1uridine-cytidine kinase-like 1 isoform X2 |
GO:0009224P:CMP biosynthetic process GO:0044206P:UMP salvage GO:0044211P:CTP salvage GO:0004849F:uridine kinase activity GO:0005524F:ATP binding GO:0043771F:cytidine kinase activity |
Signal Transduction
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SRR953582_primary_scf7180002022348_1-2043
Len: 2,042 bp
Hits: 20
E-val: 1.70E-11
Sim: 94.97%
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XP_026064438.1protein kinase C beta type isoform X2 |
GO:0007596P:blood coagulation GO:0035162P:embryonic hemopoiesis GO:0004698F:calcium,diacylglycerol-dependent serine/threonine kinase activity GO:0004699F:diacylglycerol-dependent, calcium-independent serine/threonine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180002022555_1502-2636
Len: 1,134 bp
Hits: 20
E-val: 8.00E-59
Sim: 97.87%
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XP_018939829.1 dual specificity protein phosphatase 4-like isoform X1 |
GO:0001714P:endodermal cell fate specification GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0040037P:negative regulation of fibroblast growth factor receptor signaling pathway GO:0070373P:negative regulation of ERK1 and ERK2 cascade GO:1903225P:negative regulation of endodermal cell differentiation GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0017017F:MAP kinase tyrosine/serine/threonine phosphatase activity GO:0017018F:myosin phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0140793F:histone H2AXY142 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180002022586_1-2321
Len: 2,320 bp
Hits: 20
E-val: 1.10E-09
Sim: 99.33%
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RXN24782.1cGMP-dependent kinase 2-like protein |
GO:0007165P:signal transduction GO:0004692F:cGMP-dependent protein kinase activity GO:0005524F:ATP binding GO:0030553F:cGMP binding GO:0106310F:protein serine kinase activity |
Signal Transduction
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SRR953582_primary_scf7180002022849_1-1957
Len: 1,956 bp
Hits: 20
E-val: 7.40E-28
Sim: 85.79%
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XP_026067245.1serine/threonine-protein kinase N2-like isoform X3 |
GO:0007165P:signal transduction GO:0004698F:calcium,diacylglycerol-dependent serine/threonine kinase activity GO:0004699F:diacylglycerol-dependent, calcium-independent serine/threonine kinase activity GO:0005524F:ATP binding GO:0031267F:small GTPase binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0030496C:midbody GO:0032154C:cleavage furrow |
Signal Transduction
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SRR953582_primary_scf7180002023345_1-1508
Len: 1,507 bp
Hits: 20
E-val: 2.70E-25
Sim: 89.37%
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RXN23533.1sedoheptulokinase isoform X2 |
GO:0006071P:glycerol metabolic process GO:0043030P:regulation of macrophage activation GO:0071222P:cellular response to lipopolysaccharide GO:0050277F:sedoheptulokinase activity GO:0005829C:cytosol |
Signal Transduction
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SRR953582_primary_scf7180002023923_434-2051
Len: 1,617 bp
Hits: 20
E-val: 9.80E-18
Sim: 96.76%
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ROI37040.1Glycerol kinase |
GO:0006641P:triglyceride metabolic process GO:0019563P:glycerol catabolic process GO:0046167P:glycerol-3-phosphate biosynthetic process GO:0004370F:glycerol kinase activity GO:0005524F:ATP binding GO:0005741C:mitochondrial outer membrane |
Signal Transduction
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SRR953582_primary_scf7180002024464_1-2429
Len: 2,428 bp
Hits: 20
E-val: 1.50E-17
Sim: 97.07%
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XP_005155633.1erbin isoform X1 |
GO:0043113P:receptor clustering GO:0045197P:establishment or maintenance of epithelial cell apical/basal polarity GO:0098609P:cell-cell adhesion GO:0098887P:neurotransmitter receptor transport, endosome to postsynaptic membrane GO:0098968P:neurotransmitter receptor transport postsynaptic membrane to endosome GO:0019901F:protein kinase binding GO:0005912C:adherens junction GO:0014069C:postsynaptic density GO:0016323C:basolateral plasma membrane GO:0045211C:postsynaptic membrane |
Signal Transduction
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SRR953582_primary_scf7180002024565_1-1478
Len: 1,477 bp
Hits: 20
E-val: 5.20E-26
Sim: 95.75%
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XP_016333600.1 epidermal growth factor receptor-like isoform X1 |
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0030182P:neuron differentiation GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0043410P:positive regulation of MAPK cascade GO:0045187P:regulation of circadian sleep/wake cycle, sleep GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0050679P:positive regulation of epithelial cell proliferation GO:0072554P:blood vessel lumenization GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0048408F:epidermal growth factor binding GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0009925C:basal plasma membrane GO:0012505C:endomembrane system GO:0043235C:receptor complex |
Signal Transduction
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SRR953582_primary_scf7180002025000_687-1740
Len: 1,053 bp
Hits: 20
E-val: 6.20E-29
Sim: 94.87%
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XP_018969071.1 dual specificity mitogen-activated protein kinase kinase 2-like |
GO:0032872P:regulation of stress-activated MAPK cascade GO:0090170P:regulation of Golgi inheritance GO:2000641P:regulation of early endosome to late endosome transport GO:0004674F:protein serine/threonine kinase activity GO:0004708F:MAP kinase kinase activity GO:0004713F:protein tyrosine kinase activity GO:0005524F:ATP binding GO:0046983F:protein dimerization activity GO:0005739C:mitochondrion GO:0005769C:early endosome GO:0005770C:late endosome GO:0005925C:focal adhesion |
Signal Transduction
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SRR953582_primary_scf7180002025492_385-2190
Len: 1,805 bp
Hits: 20
E-val: 1.60E-125
Sim: 94.48%
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RXN08659.1nuclear receptor subfamily 5 group A member 2-like protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009755P:hormone-mediated signaling pathway GO:0009888P:tissue development GO:0030522P:intracellular receptor signaling pathway GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0016301F:kinase activity GO:0000502C:proteasome complex GO:0090575C:RNA polymerase II transcription regulator complex |
Signal Transduction
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SRR953582_primary_scf7180002026112_1-3360
Len: 3,359 bp
Hits: 20
E-val: 5.90E-41
Sim: 99.43%
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XP_018923133.1 LOW QUALITY PROTEIN: connector enhancer of kinase suppressor of ras 2-like |
GO:0009966P:regulation of signal transduction GO:0016301F:kinase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR953582_primary_scf7180002027161_1-3644
Len: 3,643 bp
Hits: 20
E-val: 2.10E-238
Sim: 55.64%
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XP_018947446.1 centrosomal protein of 192 kDa-like, partial |
GO:0007098P:centrosome cycle GO:0051298P:centrosome duplication GO:0071539P:protein localization to centrosome GO:0090222P:centrosome-templated microtubule nucleation GO:0090307P:mitotic spindle assembly GO:0019901F:protein kinase binding GO:0000242C:pericentriolar material GO:0005737C:cytoplasm GO:0005814C:centriole |
Signal Transduction
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SRR953582_primary_scf7180002027346_1-2388
Len: 2,387 bp
Hits: 20
E-val: 1.30E-26
Sim: 90.27%
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XP_008400233.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 2, mitochondrial-like isoform X2 |
GO:0008286P:insulin receptor signaling pathway GO:0010510P:regulation of pyruvate decarboxylation to acetyl-CoA GO:0010906P:regulation of glucose metabolic process GO:0004740F:pyruvate dehydrogenase (acetyl-transferring) kinase activity GO:0005524F:ATP binding GO:0005759C:mitochondrial matrix |
Signal Transduction
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SRR953582_primary_scf7180002027897_1258-2770
Len: 1,512 bp
Hits: 20
E-val: 1.50E-31
Sim: 91.27%
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XP_026116155.1phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform-like |
GO:0016477P:cell migration GO:0036092P:phosphatidylinositol-3-phosphate biosynthetic process GO:0043491P:phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:0048015P:phosphatidylinositol-mediated signaling GO:0005524F:ATP binding GO:0016303F:1-phosphatidylinositol-3-kinase activity GO:0035005F:1-phosphatidylinositol-4-phosphate 3-kinase activity GO:0046934F:1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0005943C:phosphatidylinositol 3-kinase complex, class IA GO:0005944C:phosphatidylinositol 3-kinase complex, class IB |
Signal Transduction
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SRR953582_primary_scf7180002027998_921-1755
Len: 834 bp
Hits: 20
E-val: 1.50E-22
Sim: 62.75%
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XP_018955127.1 mitogen-activated protein kinase 8A isoform X1 |
GO:0050794P:regulation of cellular process GO:0004674F:protein serine/threonine kinase activity |
Signal Transduction
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SRR953582_primary_scf7180002028390_1-2512
Len: 2,511 bp
Hits: 20
E-val: 2.50E-36
Sim: 99.35%
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RXN08094.1phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform |
GO:0006355P:regulation of DNA-templated transcription GO:0016477P:cell migration GO:0036092P:phosphatidylinositol-3-phosphate biosynthetic process GO:0043491P:phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:0048015P:phosphatidylinositol-mediated signaling GO:0003700F:DNA-binding transcription factor activity GO:0005524F:ATP binding GO:0016303F:1-phosphatidylinositol-3-kinase activity GO:0035005F:1-phosphatidylinositol-4-phosphate 3-kinase activity GO:0043565F:sequence-specific DNA binding GO:0046934F:1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0005942C:phosphatidylinositol 3-kinase complex |
Signal Transduction
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SRR953582_primary_scf7180002029651_1-2415
Len: 2,414 bp
Hits: 20
E-val: 4.50E-27
Sim: 81.73%
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XP_016312917.1 LOW QUALITY PROTEIN: ceramide kinase |
Signal Transduction
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