Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924327_primary_scf7180002222246_1-1502
Len: 1,501 bp
Hits: 20
E-val: 5.10E-170
Sim: 74.55%
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XP_016091401.1 CREB-binding protein-like |
GO:0006355P:regulation of DNA-templated transcription GO:0005488F:binding GO:0010484F:histone H3 acetyltransferase activity GO:0010485F:histone H4 acetyltransferase activity GO:0043998F:histone H2A acetyltransferase activity GO:0044013F:histone H2B acetyltransferase activity GO:0031981C:nuclear lumen GO:0032991C:protein-containing complex |
Transcription Regulation
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SRR924327_primary_scf7180002222815_1-3256
Len: 3,255 bp
Hits: 20
E-val: 0
Sim: 95.09%
|
XP_018921558.1 teashirt homolog 2-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0048701P:embryonic cranial skeleton morphogenesis GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002222834_823-1791
Len: 968 bp
Hits: 20
E-val: 9.30E-149
Sim: 96.61%
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XP_018923913.1 LOW QUALITY PROTEIN: transcription factor Maf-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0042742P:defense response to bacterium GO:0050832P:defense response to fungus GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002223142_886-4953
Len: 4,067 bp
Hits: 20
E-val: 0
Sim: 86.32%
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XP_016103287.1 zinc finger protein 646-like isoform X2 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002223163_1-1291
Len: 1,290 bp
Hits: 20
E-val: 5.10E-142
Sim: 90.21%
|
XP_018955431.1 Krueppel-like factor 4 isoform X3 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
Transcription Regulation
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SRR924327_primary_scf7180002223212_1-1243
Len: 1,242 bp
Hits: 20
E-val: 4.60E-116
Sim: 95.24%
|
XP_018926919.1 paired box protein Pax-1, partial |
GO:0001501P:skeletal system development GO:0006357P:regulation of transcription by RNA polymerase II GO:0060037P:pharyngeal system development GO:1904888P:cranial skeletal system development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002223226_381-1121
Len: 740 bp
Hits: 20
E-val: 1.70E-110
Sim: 90.36%
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XP_018979644.1 LOW QUALITY PROTEIN: protein L-Myc-1b-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002223267_925-2164
Len: 1,239 bp
Hits: 20
E-val: 1.50E-18
Sim: 91.1%
|
XP_018929677.1 zinc finger protein GLIS1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006999P:nuclear pore organization GO:0015031P:protein transport GO:0051028P:mRNA transport GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0030674F:protein-macromolecule adaptor activity GO:0031965C:nuclear membrane GO:0070762C:nuclear pore transmembrane ring |
Transcription Regulation
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SRR924327_primary_scf7180002223676_1-1038
Len: 1,037 bp
Hits: 20
E-val: 3.30E-144
Sim: 93.35%
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XP_018945441.1 eomesodermin-like |
GO:0001708P:cell fate specification GO:0006357P:regulation of transcription by RNA polymerase II GO:0009653P:anatomical structure morphogenesis GO:0045893P:positive regulation of DNA-templated transcription GO:0060429P:epithelium development GO:0072676P:lymphocyte migration GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002223748_471-1295
Len: 824 bp
Hits: 20
E-val: 2.00E-83
Sim: 72.43%
|
RXN17820.1LINE-1 type transposase domain-containing 1 |
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002223827_1-670
Len: 669 bp
Hits: 20
E-val: 1.20E-14
Sim: 82.57%
|
XP_009560141.1 nuclear transcription factor Y subunit gamma isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0046982F:protein heterodimerization activity GO:0016602C:CCAAT-binding factor complex |
Transcription Regulation
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SRR924327_primary_scf7180002224014_619-1491
Len: 872 bp
Hits: 20
E-val: 5.80E-166
Sim: 78.62%
|
XP_018934120.1 forkhead box protein G1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003700F:DNA-binding transcription factor activity GO:1990837F:sequence-specific double-stranded DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002224111_1-1582
Len: 1,581 bp
Hits: 20
E-val: 4.20E-13
Sim: 79.31%
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XP_016102487.1 transcription elongation regulator 1-like isoform X1 |
Transcription Regulation
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SRR924327_primary_scf7180002224708_1-1114
Len: 1,113 bp
Hits: 20
E-val: 1.80E-23
Sim: 95.56%
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CAF97756.1unnamed protein product |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0035092P:sperm DNA condensation GO:0035886P:vascular associated smooth muscle cell differentiation GO:0042981P:regulation of apoptotic process GO:0045814P:negative regulation of gene expression, epigenetic GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051155P:positive regulation of striated muscle cell differentiation GO:0051726P:regulation of cell cycle GO:1902275P:regulation of chromatin organization GO:1905168P:positive regulation of double-strand break repair via homologous recombination GO:0005515F:protein binding GO:0140463F:chromatin-protein adaptor activity GO:0140767F:enzyme-substrate adaptor activity GO:0000786C:nucleosome GO:0005730C:nucleolus GO:0005737C:cytoplasm GO:0016604C:nuclear body GO:0031965C:nuclear membrane GO:0032777C:piccolo histone acetyltransferase complex GO:0035267C:NuA4 histone acetyltransferase complex GO:0035861C:site of double-strand break |
Transcription Regulation
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SRR924327_primary_scf7180002224886_1-1979
Len: 1,978 bp
Hits: 20
E-val: 7.40E-193
Sim: 77.7%
|
XP_018937494.1 calmodulin-binding transcription activator 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006986P:response to unfolded protein GO:0007399P:nervous system development GO:0003690F:double-stranded DNA binding GO:0003712F:transcription coregulator activity GO:0046983F:protein dimerization activity GO:0005634C:nucleus GO:0005789C:endoplasmic reticulum membrane |
Transcription Regulation
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SRR924327_primary_scf7180002224920_1-1249
Len: 1,248 bp
Hits: 20
E-val: 2.30E-38
Sim: 72.5%
|
XP_016351887.1 heterogeneous nuclear ribonucleoprotein U-like isoform X1 |
GO:0000380P:alternative mRNA splicing, via spliceosome GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003723F:RNA binding GO:1990841F:promoter-specific chromatin binding GO:0005634C:nucleus GO:1990904C:ribonucleoprotein complex |
Transcription Regulation
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SRR924327_primary_scf7180002225689_331-1404
Len: 1,073 bp
Hits: 20
E-val: 5.80E-184
Sim: 97.22%
|
XP_016415407.1 forkhead box protein F2-like isoform X2 |
GO:0001894P:tissue homeostasis GO:0006357P:regulation of transcription by RNA polymerase II GO:0009887P:animal organ morphogenesis GO:0048731P:system development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002225742_1-2397
Len: 2,396 bp
Hits: 20
E-val: 7.40E-272
Sim: 92.34%
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XP_016138865.1 teashirt homolog 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002225798_419-1652
Len: 1,233 bp
Hits: 20
E-val: 1.10E-157
Sim: 95.51%
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XP_018930201.1 zinc finger and BTB domain-containing protein 14-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001817P:regulation of cytokine production GO:0002682P:regulation of immune system process GO:0006260P:DNA replication GO:0006265P:DNA topological change GO:0007059P:chromosome segregation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0003917F:DNA topoisomerase type I (single strand cut, ATP-independent) activity GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm GO:0005694C:chromosome GO:0005730C:nucleolus |
Transcription Regulation
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SRR924327_primary_scf7180002225804_50-1441
Len: 1,391 bp
Hits: 20
E-val: 1.40E-251
Sim: 92.78%
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XP_018973360.1 nuclear factor interleukin-3-regulated protein-like isoform X1 |
GO:0006366P:transcription by RNA polymerase II GO:0006955P:immune response GO:0007507P:heart development GO:0007623P:circadian rhythm GO:0045892P:negative regulation of DNA-templated transcription GO:0061515P:myeloid cell development GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924327_primary_scf7180002225997_1-1243
Len: 1,242 bp
Hits: 20
E-val: 1.70E-94
Sim: 55.47%
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XP_018940686.1 peroxisome proliferator-activated receptor delta-like |
GO:0006355P:regulation of DNA-templated transcription GO:0030154P:cell differentiation GO:0050896P:response to stimulus GO:0043565F:sequence-specific DNA binding GO:0043229C:intracellular organelle |
Transcription Regulation
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SRR924327_primary_scf7180002226707_1003-1254
Len: 251 bp
Hits: 20
E-val: 7.70E-23
Sim: 82.05%
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XP_018965852.1 TSC22 domain family protein 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0008284P:positive regulation of cell population proliferation GO:0043066P:negative regulation of apoptotic process GO:0005634C:nucleus GO:0005829C:cytosol |
Transcription Regulation
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SRR924327_primary_scf7180002227147_731-1015
Len: 284 bp
Hits: 20
E-val: 5.90E-27
Sim: 92.29%
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XP_018952218.1 microphthalmia-associated transcription factor-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030318P:melanocyte differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924327_primary_scf7180002227435_1-1377
Len: 1,376 bp
Hits: 20
E-val: 2.20E-42
Sim: 93.96%
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XP_016093907.1 zinc finger protein 704 isoform X3 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002227543_1-861
Len: 860 bp
Hits: 20
E-val: 1.00E-21
Sim: 99.13%
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XP_017556713.1 general transcription factor IIH subunit 1 |
GO:0006289P:nucleotide-excision repair GO:0006360P:transcription by RNA polymerase I GO:0006366P:transcription by RNA polymerase II GO:0006590P:thyroid hormone generation GO:0006979P:response to oxidative stress GO:0042446P:hormone biosynthetic process GO:0042744P:hydrogen peroxide catabolic process GO:0048066P:developmental pigmentation GO:0098869P:cellular oxidant detoxification GO:0004601F:peroxidase activity GO:0005509F:calcium ion binding GO:0016174F:NAD(P)H oxidase H2O2-forming activity GO:0020037F:heme binding GO:0000439C:transcription factor TFIIH core complex GO:0005675C:transcription factor TFIIH holo complex GO:0005737C:cytoplasm GO:0016020C:membrane |
Transcription Regulation
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