Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924338_primary_scf7180002469418_1-2228
Len: 2,227 bp
Hits: 20
E-val: 0
Sim: 95.65%
|
XP_016374760.1 ras-responsive element-binding protein 1-like isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002470092_1-1254
Len: 1,253 bp
Hits: 20
E-val: 4.60E-108
Sim: 99.84%
|
XP_026089478.1homeobox protein SIX6-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0008283P:cell population proliferation GO:0043010P:camera-type eye development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
Transcription Regulation
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SRR924338_primary_scf7180002470138_803-1054
Len: 251 bp
Hits: 20
E-val: 5.00E-38
Sim: 96.61%
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XP_018926662.1 one cut domain family member 2-like, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002471030_337-1425
Len: 1,088 bp
Hits: 20
E-val: 2.70E-152
Sim: 93.8%
|
XP_018981615.1 LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B-like |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0031491F:nucleosome binding GO:0005654C:nucleoplasm GO:0016514C:SWI/SNF complex GO:0035060C:brahma complex GO:0071565C:nBAF complex |
Transcription Regulation
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SRR924338_primary_scf7180002473273_1-949
Len: 948 bp
Hits: 20
E-val: 1.80E-59
Sim: 94.94%
|
XP_016105507.1 LOW QUALITY PROTEIN: ETS translocation variant 4-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009792P:embryo development ending in birth or egg hatching GO:0035108P:limb morphogenesis GO:0035778P:pronephric nephron tubule epithelial cell differentiation GO:0045893P:positive regulation of DNA-templated transcription GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002474388_107-644
Len: 537 bp
Hits: 20
E-val: 6.90E-61
Sim: 85.93%
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XP_018976465.1 myelin transcription factor 1-like protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002477401_368-868
Len: 500 bp
Hits: 20
E-val: 1.60E-59
Sim: 76.55%
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XP_018967621.1 DNA-binding protein inhibitor ID-1-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0032922P:circadian regulation of gene expression GO:0045664P:regulation of neuron differentiation GO:0050768P:negative regulation of neurogenesis GO:0003677F:DNA binding GO:0003714F:transcription corepressor activity GO:0046983F:protein dimerization activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924338_primary_scf7180002483702_321-1350
Len: 1,029 bp
Hits: 20
E-val: 2.30E-65
Sim: 69.87%
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XP_026078674.1MKL/myocardin-like protein 2 isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051145P:smooth muscle cell differentiation GO:0003713F:transcription coactivator activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002483806_1-2646
Len: 2,645 bp
Hits: 20
E-val: 2.00E-23
Sim: 97.38%
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XP_016086106.1 homeobox protein Meis2-like |
GO:0001947P:heart looping GO:0003209P:cardiac atrium morphogenesis GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002484043_64-1113
Len: 1,049 bp
Hits: 20
E-val: 4.60E-133
Sim: 84.6%
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XP_016321434.1 B-cell lymphoma/leukemia 11A-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:2000171P:negative regulation of dendrite development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002484065_477-1679
Len: 1,202 bp
Hits: 20
E-val: 9.30E-199
Sim: 93.18%
|
XP_018925690.1 transcription factor Sp8-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002484146_1-1416
Len: 1,415 bp
Hits: 20
E-val: 9.10E-52
Sim: 99.12%
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XP_018958534.1 calmodulin-binding transcription activator 1-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0003690F:double-stranded DNA binding GO:0003712F:transcription coregulator activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002485070_1-1416
Len: 1,415 bp
Hits: 20
E-val: 6.10E-16
Sim: 99.55%
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XP_026050815.1mediator of RNA polymerase II transcription subunit 23 isoform X3 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0010628P:positive regulation of gene expression GO:0005667C:transcription regulator complex GO:0016592C:mediator complex |
Transcription Regulation
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SRR924338_primary_scf7180002485320_1-512
Len: 511 bp
Hits: 20
E-val: 7.90E-14
Sim: 60.91%
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XP_018964481.1 growth arrest and DNA damage-inducible protein GADD45 gamma-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005789C:endoplasmic reticulum membrane |
Transcription Regulation
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SRR924338_primary_scf7180002485651_69-1424
Len: 1,355 bp
Hits: 20
E-val: 1.00E-177
Sim: 93.37%
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XP_016381272.1 CREB-binding protein-like |
GO:0006338P:chromatin remodeling GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048511P:rhythmic process GO:0003713F:transcription coactivator activity GO:0008270F:zinc ion binding GO:0031490F:chromatin DNA binding GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0140297F:DNA-binding transcription factor binding GO:0140908F:histone H3K122 acetyltransferase activity GO:0000123C:histone acetyltransferase complex GO:0005654C:nucleoplasm GO:0005667C:transcription regulator complex GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924338_primary_scf7180002485726_670-1107
Len: 437 bp
Hits: 20
E-val: 2.30E-78
Sim: 95.06%
|
XP_018926491.1 homeobox protein Nkx-6.2-like |
GO:0003309P:type B pancreatic cell differentiation GO:0003310P:pancreatic A cell differentiation GO:0006357P:regulation of transcription by RNA polymerase II GO:0021522P:spinal cord motor neuron differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002486024_465-1113
Len: 648 bp
Hits: 20
E-val: 2.90E-114
Sim: 83.57%
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XP_018950632.1 class A basic helix-loop-helix protein 9-like |
GO:0007423P:sensory organ development GO:0009653P:anatomical structure morphogenesis GO:0033339P:pectoral fin development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0061564P:axon development GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0070888F:E-box binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002486094_1-266
Len: 265 bp
Hits: 20
E-val: 3.80E-20
Sim: 99.33%
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CDQ99328.1unnamed protein product, partial |
GO:0001654P:eye development GO:0001655P:urogenital system development GO:0001658P:branching involved in ureteric bud morphogenesis GO:0001779P:natural killer cell differentiation GO:0001944P:vasculature development GO:0007420P:brain development GO:0009952P:anterior/posterior pattern specification GO:0009954P:proximal/distal pattern formation GO:0010971P:positive regulation of G2/M transition of mitotic cell cycle GO:0014036P:neural crest cell fate specification GO:0030223P:neutrophil differentiation GO:0030278P:regulation of ossification GO:0030325P:adrenal gland development GO:0030326P:embryonic limb morphogenesis GO:0035162P:embryonic hemopoiesis GO:0045665P:negative regulation of neuron differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048536P:spleen development GO:0048538P:thymus development GO:0048666P:neuron development GO:0048706P:embryonic skeletal system development GO:0048795P:swim bladder morphogenesis GO:0060216P:definitive hemopoiesis GO:1904888P:cranial skeletal system development GO:2000648P:positive regulation of stem cell proliferation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001222F:transcription corepressor binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0140297F:DNA-binding transcription factor binding GO:0005654C:nucleoplasm GO:0005737C:cytoplasm GO:0016020C:membrane GO:0030496C:midbody GO:0090575C:RNA polymerase II transcription regulator complex |
Transcription Regulation
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SRR924338_primary_scf7180002486349_1-548
Len: 547 bp
Hits: 20
E-val: 3.10E-72
Sim: 92.14%
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XP_026098105.1doublesex- and mab-3-related transcription factor A2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007281P:germ cell development GO:0007548P:sex differentiation GO:0021537P:telencephalon development GO:0060128P:corticotropin hormone secreting cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043130F:ubiquitin binding GO:0046872F:metal ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002486958_284-1000
Len: 716 bp
Hits: 20
E-val: 9.00E-133
Sim: 99.01%
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RXN06794.1transcription factor Sox-14 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0021854P:hypothalamus development GO:0030182P:neuron differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002487175_325-1406
Len: 1,081 bp
Hits: 20
E-val: 9.60E-86
Sim: 94.02%
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XP_026097837.1transcriptional repressor protein YY1-like |
GO:0001525P:angiogenesis GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0007507P:heart development GO:0010628P:positive regulation of gene expression GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005515F:protein binding GO:0008270F:zinc ion binding GO:0000785C:chromatin GO:0005667C:transcription regulator complex GO:0031519C:PcG protein complex |
Transcription Regulation
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SRR924338_primary_scf7180002487275_548-1147
Len: 599 bp
Hits: 20
E-val: 1.20E-34
Sim: 98.09%
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XP_016120448.1 zinc finger and BTB domain-containing protein 14, partial |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001817P:regulation of cytokine production GO:0002682P:regulation of immune system process GO:0006260P:DNA replication GO:0006265P:DNA topological change GO:0007059P:chromosome segregation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0003917F:DNA topoisomerase type I (single strand cut, ATP-independent) activity GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm GO:0005694C:chromosome GO:0005730C:nucleolus |
Transcription Regulation
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SRR924338_primary_scf7180002488293_1-677
Len: 676 bp
Hits: 20
E-val: 3.50E-25
Sim: 98.27%
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XP_026098282.1GATA-binding factor 2-like isoform X3 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003190P:atrioventricular valve formation GO:0021514P:ventral spinal cord interneuron differentiation GO:0035912P:dorsal aorta morphogenesis GO:0045165P:cell fate commitment GO:0045766P:positive regulation of angiogenesis GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048821P:erythrocyte development GO:0060215P:primitive hemopoiesis GO:1902895P:positive regulation of miRNA transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002490401_301-1226
Len: 925 bp
Hits: 20
E-val: 2.10E-158
Sim: 94.29%
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XP_016118052.1 GATA-binding factor 6-B-like, partial |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001889P:liver development GO:0030099P:myeloid cell differentiation GO:0030855P:epithelial cell differentiation GO:0045165P:cell fate commitment GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048565P:digestive tract development GO:0060975P:cardioblast migration to the midline involved in heart field formation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002491484_1-779
Len: 778 bp
Hits: 20
E-val: 1.70E-23
Sim: 95.76%
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CAG01794.1unnamed protein product |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0010628P:positive regulation of gene expression GO:0043473P:pigmentation GO:0050768P:negative regulation of neurogenesis GO:0072359P:circulatory system development GO:0005667C:transcription regulator complex GO:0016592C:mediator complex |
Transcription Regulation
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