Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924338_primary_scf7180002525797_1-733
Len: 732 bp
Hits: 20
E-val: 1.20E-36
Sim: 98.55%
|
ABV59209.1hypoxia-inducible factor 1 alpha |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0071456P:cellular response to hypoxia GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924338_primary_scf7180002527814_1-425
Len: 424 bp
Hits: 20
E-val: 9.10E-32
Sim: 85.68%
|
XP_018930978.1 short stature homeobox protein 2 isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007507P:heart development GO:0008016P:regulation of heart contraction GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:1990837F:sequence-specific double-stranded DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002528645_413-1264
Len: 851 bp
Hits: 20
E-val: 4.10E-23
Sim: 91.49%
|
NP_957490.1short stature homeobox protein 2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007507P:heart development GO:0008016P:regulation of heart contraction GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:1990837F:sequence-specific double-stranded DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002530190_1-617
Len: 616 bp
Hits: 20
E-val: 2.10E-08
Sim: 96.35%
|
XP_016389918.1 leucine-rich repeat flightless-interacting protein 2-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific |
Transcription Regulation
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SRR924338_primary_scf7180002530813_185-721
Len: 536 bp
Hits: 20
E-val: 2.10E-73
Sim: 69.98%
|
XP_018967903.1 transcription factor HES-5-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0007405P:neuroblast proliferation GO:0010001P:glial cell differentiation GO:0045665P:negative regulation of neuron differentiation GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002538667_285-1093
Len: 808 bp
Hits: 20
E-val: 1.60E-13
Sim: 99.89%
|
CDQ93565.1unnamed protein product |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0005667C:transcription regulator complex GO:0016592C:mediator complex |
Transcription Regulation
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SRR924338_primary_scf7180002540531_1-1128
Len: 1,127 bp
Hits: 20
E-val: 2.40E-15
Sim: 98.82%
|
XP_016100148.1 mediator of RNA polymerase II transcription subunit 23, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0010628P:positive regulation of gene expression GO:0043473P:pigmentation GO:0050768P:negative regulation of neurogenesis GO:0072359P:circulatory system development GO:0005667C:transcription regulator complex GO:0016592C:mediator complex |
Transcription Regulation
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SRR924338_primary_scf7180002549030_1-879
Len: 878 bp
Hits: 20
E-val: 3.40E-134
Sim: 92.25%
|
XP_018936798.1 LOW QUALITY PROTEIN: human immunodeficiency virus type I enhancer-binding protein 2 homolog |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002596024_1-2738
Len: 2,737 bp
Hits: 20
E-val: 0
Sim: 89.49%
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XP_018934260.1 ataxin-1-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0003723F:RNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002597187_1-1671
Len: 1,670 bp
Hits: 20
E-val: 9.30E-80
Sim: 79.13%
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XP_016295994.1 transcription factor HIVEP2-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002597488_794-1069
Len: 275 bp
Hits: 20
E-val: 1.30E-42
Sim: 97.77%
|
XP_016371370.1 forkhead box protein K2-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002597531_371-1341
Len: 970 bp
Hits: 20
E-val: 9.40E-24
Sim: 100%
|
XP_018929327.1 LOW QUALITY PROTEIN: transformation/transcription domain-associated protein-like |
GO:0001964P:startle response GO:0006281P:DNA repair GO:0006355P:regulation of DNA-templated transcription GO:0035675P:neuromast hair cell development GO:0042481P:regulation of odontogenesis GO:0060536P:cartilage morphogenesis GO:0140861P:DNA repair-dependent chromatin remodeling GO:0000124C:SAGA complex GO:0005634C:nucleus GO:0035267C:NuA4 histone acetyltransferase complex |
Transcription Regulation
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SRR924338_primary_scf7180002598682_372-1414
Len: 1,042 bp
Hits: 20
E-val: 3.20E-54
Sim: 98.7%
|
XP_018979735.1 bromodomain-containing protein 2-like |
GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002601881_1-207
Len: 206 bp
Hits: 20
E-val: 6.10E-26
Sim: 96.91%
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XP_026094283.1DNA-binding protein RFX7-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific |
Transcription Regulation
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SRR924338_primary_scf7180002602333_315-1811
Len: 1,496 bp
Hits: 20
E-val: 4.70E-91
Sim: 84.65%
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XP_018980541.1 zinc finger protein 583-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0000785C:chromatin GO:0005667C:transcription regulator complex GO:0031519C:PcG protein complex |
Transcription Regulation
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SRR924338_primary_scf7180002603697_1-332
Len: 331 bp
Hits: 20
E-val: 1.20E-47
Sim: 83.16%
|
XP_018965341.1 class A basic helix-loop-helix protein 9-like |
GO:0007423P:sensory organ development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0061564P:axon development GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0070888F:E-box binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002604550_906-1205
Len: 299 bp
Hits: 20
E-val: 5.80E-41
Sim: 97.05%
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XP_018927731.1 transcription factor MafA-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002605809_343-1407
Len: 1,064 bp
Hits: 20
E-val: 1.30E-34
Sim: 62.15%
|
ROL53855.1Far upstream element-binding protein 3 |
GO:0006355P:regulation of DNA-templated transcription GO:0006357P:regulation of transcription by RNA polymerase II GO:0003723F:RNA binding GO:0003729F:mRNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924338_primary_scf7180002607947_117-821
Len: 704 bp
Hits: 20
E-val: 5.60E-127
Sim: 85.49%
|
XP_018925254.1 eomesodermin-like |
GO:0001707P:mesoderm formation GO:0001714P:endodermal cell fate specification GO:0002302P:CD8-positive, alpha-beta T cell differentiation involved in immune response GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002608031_25-1065
Len: 1,040 bp
Hits: 20
E-val: 2.80E-159
Sim: 95.25%
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XP_016087853.1 storkhead-box protein 2-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924338_primary_scf7180002608414_165-974
Len: 809 bp
Hits: 20
E-val: 3.20E-142
Sim: 90.1%
|
XP_018926343.1 homeobox protein TGIF2-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002609928_1-1040
Len: 1,039 bp
Hits: 20
E-val: 3.20E-30
Sim: 72.39%
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KPP65504.1mediator of RNA polymerase II transcription subunit 25-like |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0060021P:roof of mouth development GO:0005667C:transcription regulator complex GO:0016592C:mediator complex |
Transcription Regulation
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SRR924338_primary_scf7180002610913_1-995
Len: 994 bp
Hits: 20
E-val: 3.30E-40
Sim: 91.36%
|
XP_016402326.1 nuclear pore complex protein Nup133-like |
GO:0000972P:transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery GO:0006606P:protein import into nucleus GO:0016973P:poly(A)+ mRNA export from nucleus GO:0017056F:structural constituent of nuclear pore GO:0000776C:kinetochore GO:0031080C:nuclear pore outer ring |
Transcription Regulation
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SRR924338_primary_scf7180002611093_1-659
Len: 658 bp
Hits: 20
E-val: 9.10E-39
Sim: 68.61%
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XP_026132518.1histone acetyltransferase p300-like isoform X6 |
GO:0001947P:heart looping GO:0006355P:regulation of DNA-templated transcription GO:0033339P:pectoral fin development GO:0048701P:embryonic cranial skeleton morphogenesis GO:0005488F:binding GO:0010484F:histone H3 acetyltransferase activity GO:0010485F:histone H4 acetyltransferase activity GO:0043998F:histone H2A acetyltransferase activity GO:0044013F:histone H2B acetyltransferase activity GO:0005634C:nucleus GO:0032991C:protein-containing complex |
Transcription Regulation
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SRR924338_primary_scf7180002612019_1-959
Len: 958 bp
Hits: 20
E-val: 7.10E-32
Sim: 97.2%
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XP_026064469.1trinucleotide repeat-containing gene 6A protein-like |
GO:0006417P:regulation of translation GO:0035195P:miRNA-mediated post-transcriptional gene silencing GO:0060213P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening GO:0003723F:RNA binding GO:0000932C:P-body GO:0005654C:nucleoplasm GO:0005829C:cytosol |
Transcription Regulation
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