Gene Function: Transcription Regulation

Functional and statistical data for significant genes

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Showing 1,388 results (Page 16 of 56)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR924681_primary_scf7180003502397_1-821
Len: 820 bp
Hits: 20
E-val: 4.80E-45
Sim: 76.97%
 XP_016418366.1 mediator of RNA polymerase II transcription subunit 14-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0014033P:neural crest cell differentiation
GO:0019827P:stem cell population maintenance
GO:0021591P:ventricular system development
GO:0033081P:regulation of T cell differentiation in thymus
GO:0048514P:blood vessel morphogenesis
GO:0048703P:embryonic viscerocranium morphogenesis
GO:0003712F:transcription coregulator activity
GO:0016592C:mediator complex
GO:0070847C:core mediator complex
Transcription Regulation
SRR924681_primary_scf7180003504776_1033-2140
Len: 1,107 bp
Hits: 20
E-val: 8.60E-82
Sim: 96.63%
 XP_016410530.1 homeobox protein engrailed-2a-like
GO:0001708P:cell fate specification
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0021555P:midbrain-hindbrain boundary morphogenesis
GO:0030901P:midbrain development
GO:0060385P:axonogenesis involved in innervation
GO:0060561P:apoptotic process involved in morphogenesis
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
Transcription Regulation
SRR924681_primary_scf7180003505151_639-1620
Len: 981 bp
Hits: 20
E-val: 2.70E-18
Sim: 59.3%
 XP_018963462.1 bromodomain-containing protein 7-like isoform X1
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0070577F:obsolete lysine-acetylated histone binding
GO:0005634C:nucleus
Transcription Regulation
SRR924681_primary_scf7180003505524_1-1114
Len: 1,113 bp
Hits: 20
E-val: 1.00E-21
Sim: 96.72%
 NP_001018304.1inhibitor of growth protein 4
GO:0002244P:hematopoietic progenitor cell differentiation
GO:0006325P:chromatin organization
GO:0006355P:regulation of DNA-templated transcription
GO:0016192P:vesicle-mediated transport
GO:0043065P:positive regulation of apoptotic process
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
GO:0005882C:intermediate filament
GO:0012505C:endomembrane system
GO:0016020C:membrane
Transcription Regulation
SRR924681_primary_scf7180003506258_1-1037
Len: 1,036 bp
Hits: 20
E-val: 5.10E-68
Sim: 54.86%
 RXN06464.1programmed cell death 4
GO:0003171P:atrioventricular valve development
GO:0045892P:negative regulation of DNA-templated transcription
GO:0003723F:RNA binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
GO:0005829C:cytosol
Transcription Regulation
SRR924681_primary_scf7180003507348_525-1034
Len: 509 bp
Hits: 20
E-val: 3.70E-88
Sim: 99.87%
 XP_026089478.1homeobox protein SIX6-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0008283P:cell population proliferation
GO:0043010P:camera-type eye development
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
GO:0005667C:transcription regulator complex
Transcription Regulation
SRR924681_primary_scf7180003507374_1-394
Len: 393 bp
Hits: 20
E-val: 6.20E-59
Sim: 93.87%
 XP_018964962.1 helix-loop-helix protein 2-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0046983F:protein dimerization activity
GO:0005886C:plasma membrane
Transcription Regulation
SRR924681_primary_scf7180003508494_193-1304
Len: 1,111 bp
Hits: 20
E-val: 3.60E-205
Sim: 91.55%
 XP_018964652.1 zinc finger and BTB domain-containing protein 34-like
GO:0000122P:negative regulation of transcription by RNA polymerase II
GO:0001817P:regulation of cytokine production
GO:0002682P:regulation of immune system process
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0005654C:nucleoplasm
Transcription Regulation
SRR924681_primary_scf7180003508795_1-571
Len: 570 bp
Hits: 20
E-val: 1.40E-19
Sim: 84.59%
 XP_010790129.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
GO:0006338P:chromatin remodeling
GO:0006508P:proteolysis
GO:0030198P:extracellular matrix organization
GO:0030574P:collagen catabolic process
GO:0045597P:positive regulation of cell differentiation
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0051091P:positive regulation of DNA-binding transcription factor activity
GO:1902459P:positive regulation of stem cell population maintenance
GO:2000781P:positive regulation of double-strand break repair
GO:0003677F:DNA binding
GO:0003713F:transcription coactivator activity
GO:0004222F:metalloendopeptidase activity
GO:0008270F:zinc ion binding
GO:0030957F:Tat protein binding
GO:0000228C:nuclear chromosome
GO:0001650C:fibrillar center
GO:0005615C:extracellular space
GO:0005654C:nucleoplasm
GO:0016020C:membrane
GO:0016586C:RSC-type complex
GO:0031012C:extracellular matrix
GO:0035060C:brahma complex
GO:0071564C:npBAF complex
GO:0071565C:nBAF complex
Transcription Regulation
SRR924681_primary_scf7180003509392_1-1012
Len: 1,011 bp
Hits: 20
E-val: 1.00E-17
Sim: 93.07%
 XP_018934340.1 nucleolar complex protein 2 homolog
GO:0000122P:negative regulation of transcription by RNA polymerase II
GO:0042273P:ribosomal large subunit biogenesis
GO:0003714F:transcription corepressor activity
GO:0042393F:histone binding
GO:0005654C:nucleoplasm
GO:0005730C:nucleolus
GO:0030690C:Noc1p-Noc2p complex
GO:0030691C:Noc2p-Noc3p complex
Transcription Regulation
SRR924681_primary_scf7180003509797_303-654
Len: 351 bp
Hits: 20
E-val: 1.80E-33
Sim: 82.8%
 XP_018946113.1 paired box protein Pax-5-like
GO:0003309P:type B pancreatic cell differentiation
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0030900P:forebrain development
GO:0042593P:glucose homeostasis
GO:0060041P:retina development in camera-type eye
GO:1990798P:pancreas regeneration
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
Transcription Regulation
SRR924681_primary_scf7180003513922_2423-2770
Len: 347 bp
Hits: 20
E-val: 3.10E-46
Sim: 64.86%
 RXN15134.1LRR and PYD domains-containing 3-like protein
GO:0006355P:regulation of DNA-templated transcription
GO:0003677F:DNA binding
GO:0003700F:DNA-binding transcription factor activity
GO:0005634C:nucleus
GO:0005737C:cytoplasm
Transcription Regulation
SRR924681_primary_scf7180003514607_1-2052
Len: 2,051 bp
Hits: 20
E-val: 7.00E-37
Sim: 70.84%
 XP_026117347.1paired box protein Pax-2a isoform X28
GO:0006355P:regulation of DNA-templated transcription
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677F:DNA binding
GO:0005634C:nucleus
Transcription Regulation
SRR924681_primary_scf7180003515156_576-1048
Len: 472 bp
Hits: 20
E-val: 2.40E-09
Sim: 98.61%
 XP_026083198.1GON-4-like protein
GO:0006355P:regulation of DNA-templated transcription
GO:0003712F:transcription coregulator activity
GO:0005634C:nucleus
Transcription Regulation
SRR924681_primary_scf7180003515865_979-1788
Len: 809 bp
Hits: 20
E-val: 1.20E-19
Sim: 96.4%
 XP_018951274.1 zinc finger protein 239-like isoform X3
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0000785C:chromatin
GO:0005667C:transcription regulator complex
GO:0031519C:PcG protein complex
Transcription Regulation
SRR924681_primary_scf7180003516421_1-1612
Len: 1,611 bp
Hits: 20
E-val: 5.40E-133
Sim: 94.48%
 XP_018965552.1 sterile alpha motif domain-containing protein 11-like
GO:0045892P:negative regulation of DNA-templated transcription
GO:0003677F:DNA binding
GO:0003682F:chromatin binding
GO:0042393F:histone binding
GO:0046872F:metal ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR924681_primary_scf7180003516551_165-1130
Len: 965 bp
Hits: 20
E-val: 9.80E-191
Sim: 96.02%
 XP_026136369.1zinc finger protein ZIC 4-like isoform X2
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0021510P:spinal cord development
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR924681_primary_scf7180003516763_1-1291
Len: 1,290 bp
Hits: 20
E-val: 1.60E-47
Sim: 57.41%
 XP_026079812.1AT-rich interactive domain-containing protein 2-like, partial
GO:0006338P:chromatin remodeling
GO:0006355P:regulation of DNA-templated transcription
GO:0003677F:DNA binding
GO:0035060C:brahma complex
Transcription Regulation
SRR924681_primary_scf7180003517145_1-1403
Len: 1,402 bp
Hits: 20
E-val: 4.60E-56
Sim: 50.36%
 XP_016425099.1 GA-binding protein subunit beta-1-like
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0000976F:transcription cis-regulatory region binding
GO:0005634C:nucleus
Transcription Regulation
SRR924681_primary_scf7180003517300_103-1153
Len: 1,050 bp
Hits: 20
E-val: 6.60E-31
Sim: 97.46%
 XP_018924134.1 LOW QUALITY PROTEIN: myelin regulatory factor-like
GO:0009653P:anatomical structure morphogenesis
GO:0016540P:protein autoprocessing
GO:0032286P:central nervous system myelin maintenance
GO:0045893P:positive regulation of DNA-templated transcription
GO:0060429P:epithelium development
GO:0003700F:DNA-binding transcription factor activity
GO:0043565F:sequence-specific DNA binding
GO:0005634C:nucleus
GO:0005789C:endoplasmic reticulum membrane
Transcription Regulation
SRR924681_primary_scf7180003519333_1-1045
Len: 1,044 bp
Hits: 20
E-val: 1.70E-111
Sim: 95.74%
 XP_018966572.1 vascular endothelial zinc finger 1-like isoform X1
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR924681_primary_scf7180003520411_1-1291
Len: 1,290 bp
Hits: 20
E-val: 1.10E-43
Sim: 96.02%
 XP_026095583.1transcription factor Sox-10-like
GO:0000122P:negative regulation of transcription by RNA polymerase II
GO:0001755P:neural crest cell migration
GO:0010628P:positive regulation of gene expression
GO:0014029P:neural crest formation
GO:0021772P:olfactory bulb development
GO:0022011P:myelination in peripheral nervous system
GO:0030318P:melanocyte differentiation
GO:0048484P:enteric nervous system development
GO:0048709P:oligodendrocyte differentiation
GO:0048752P:semicircular canal morphogenesis
GO:0048840P:otolith development
GO:0048874P:host-mediated modulation of intestinal microbiota composition
GO:0050768P:negative regulation of neurogenesis
GO:0050935P:iridophore differentiation
GO:0050936P:xanthophore differentiation
GO:0071600P:otic vesicle morphogenesis
GO:1904888P:cranial skeletal system development
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
GO:0005737C:cytoplasm
Transcription Regulation
SRR924681_primary_scf7180003520918_1-1172
Len: 1,171 bp
Hits: 20
E-val: 1.50E-23
Sim: 90.17%
 XP_026058285.1lysine-specific demethylase 7B-like
GO:0006338P:chromatin remodeling
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0030901P:midbrain development
GO:0032259P:methylation
GO:0003712F:transcription coregulator activity
GO:0008168F:methyltransferase activity
GO:0008270F:zinc ion binding
GO:0032454F:histone H3K9 demethylase activity
GO:0035575F:histone H4K20 demethylase activity
GO:0051864F:histone H3K36 demethylase activity
GO:0071558F:histone H3K27me2/H3K27me3 demethylase activity
GO:0005634C:nucleus
Transcription Regulation
SRR924681_primary_scf7180003521584_726-1144
Len: 418 bp
Hits: 20
E-val: 4.20E-74
Sim: 96.02%
 XP_018981790.1 forkhead box protein Q1-like isoform X1
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0009653P:anatomical structure morphogenesis
GO:0030154P:cell differentiation
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
Transcription Regulation
SRR924681_primary_scf7180003522518_625-1458
Len: 833 bp
Hits: 20
E-val: 1.10E-145
Sim: 98.33%
 XP_018928543.1 LOW QUALITY PROTEIN: zinc finger homeobox protein 4-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation