Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002039206_339-1257
Len: 918 bp
Hits: 20
E-val: 2.10E-41
Sim: 77.08%
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XP_026135480.1DNA-directed RNA polymerase I subunit RPA1 |
GO:0006351P:DNA-templated transcription GO:0006396P:RNA processing GO:0048513P:animal organ development GO:0034062F:5'-3' RNA polymerase activity GO:0000428C:DNA-directed RNA polymerase complex GO:0005737C:cytoplasm GO:0031981C:nuclear lumen GO:0140513C:nuclear protein-containing complex |
Transcription Regulation
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SRR941867_primary_scf7180002040992_1640-4057
Len: 2,417 bp
Hits: 20
E-val: 0
Sim: 94.09%
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XP_018973601.1 zinc fingers and homeoboxes protein 2-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002040993_213-2624
Len: 2,411 bp
Hits: 20
E-val: 0
Sim: 93.47%
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XP_018974800.1 zinc fingers and homeoboxes protein 2-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002041017_1-5363
Len: 5,362 bp
Hits: 20
E-val: 0
Sim: 86.8%
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XP_016321894.1 zinc finger protein 865-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002041370_1-3662
Len: 3,661 bp
Hits: 20
E-val: 2.50E-77
Sim: 65.85%
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XP_018968371.1 mediator of RNA polymerase II transcription subunit 13-like, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003712F:transcription coregulator activity GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002041399_770-5616
Len: 4,846 bp
Hits: 20
E-val: 7.80E-87
Sim: 91.05%
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ROL43875.1Krueppel-like factor 13 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
Transcription Regulation
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SRR941867_primary_scf7180002041523_201-785
Len: 584 bp
Hits: 20
E-val: 3.20E-80
Sim: 78.28%
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XP_018950087.1 mediator of RNA polymerase II transcription subunit 23-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0010628P:positive regulation of gene expression GO:0043473P:pigmentation GO:0050768P:negative regulation of neurogenesis GO:0072359P:circulatory system development GO:0005667C:transcription regulator complex GO:0016592C:mediator complex |
Transcription Regulation
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SRR941867_primary_scf7180002041907_188-3313
Len: 3,125 bp
Hits: 20
E-val: 8.80E-23
Sim: 100%
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XP_026082432.1homeobox protein MOX-2-like |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0061053P:somite development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002042216_1-463
Len: 462 bp
Hits: 20
E-val: 8.70E-20
Sim: 86.83%
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XP_010790129.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like |
GO:0006338P:chromatin remodeling GO:0006508P:proteolysis GO:0030198P:extracellular matrix organization GO:0030574P:collagen catabolic process GO:0045597P:positive regulation of cell differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051091P:positive regulation of DNA-binding transcription factor activity GO:1902459P:positive regulation of stem cell population maintenance GO:2000781P:positive regulation of double-strand break repair GO:0003677F:DNA binding GO:0003713F:transcription coactivator activity GO:0004222F:metalloendopeptidase activity GO:0008270F:zinc ion binding GO:0030957F:Tat protein binding GO:0000228C:nuclear chromosome GO:0001650C:fibrillar center GO:0005615C:extracellular space GO:0005654C:nucleoplasm GO:0016586C:RSC-type complex GO:0031012C:extracellular matrix GO:0035060C:brahma complex GO:0071564C:npBAF complex GO:0071565C:nBAF complex |
Transcription Regulation
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SRR941867_primary_scf7180002042218_553-2136
Len: 1,583 bp
Hits: 20
E-val: 4.10E-186
Sim: 65.43%
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XP_018941142.1 nuclear receptor subfamily 4 group A member 1-like |
GO:0006355P:regulation of DNA-templated transcription GO:0010906P:regulation of glucose metabolic process GO:0051716P:cellular response to stimulus GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005622C:intracellular anatomical structure |
Transcription Regulation
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SRR941867_primary_scf7180002042264_1-3555
Len: 3,554 bp
Hits: 20
E-val: 2.10E-41
Sim: 82.44%
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XP_021331811.1HIV-1 tat interactive protein isoform X2 |
GO:0000724P:double-strand break repair via homologous recombination GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0140908F:histone H3K122 acetyltransferase activity GO:0031981C:nuclear lumen GO:0035267C:NuA4 histone acetyltransferase complex |
Transcription Regulation
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SRR941867_primary_scf7180002042305_1504-2310
Len: 806 bp
Hits: 20
E-val: 4.90E-151
Sim: 92.59%
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XP_018977813.1 mothers against decapentaplegic homolog 6-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0010172P:embryonic body morphogenesis GO:0030154P:cell differentiation GO:0060395P:SMAD protein signal transduction GO:0046872F:metal ion binding GO:0070411F:I-SMAD binding GO:0140416F:transcription regulator inhibitor activity GO:0005737C:cytoplasm GO:0071144C:heteromeric SMAD protein complex |
Transcription Regulation
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SRR941867_primary_scf7180002042613_1-1918
Len: 1,917 bp
Hits: 20
E-val: 8.90E-42
Sim: 96.33%
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XP_021446654.1ETS domain-containing transcription factor ERF-like, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030154P:cell differentiation GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002042784_1-1894
Len: 1,893 bp
Hits: 20
E-val: 3.20E-129
Sim: 94.23%
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RXN15208.1homeobox SIX4-like protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
Transcription Regulation
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SRR941867_primary_scf7180002042816_1330-3063
Len: 1,733 bp
Hits: 20
E-val: 0
Sim: 94.62%
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XP_018979384.1 zinc finger BED domain-containing protein 4-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002042966_1014-2210
Len: 1,196 bp
Hits: 20
E-val: 6.50E-152
Sim: 70.86%
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XP_018923072.1 homeobox protein Hox-A13b |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0033333P:fin development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific |
Transcription Regulation
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SRR941867_primary_scf7180002043078_1-3301
Len: 3,300 bp
Hits: 20
E-val: 2.00E-41
Sim: 85.12%
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XP_018963255.1 putative transcription factor Ovo-like 1 |
GO:0006259P:DNA metabolic process GO:0006357P:regulation of transcription by RNA polymerase II GO:0009913P:epidermal cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002043348_1298-2479
Len: 1,181 bp
Hits: 20
E-val: 9.80E-193
Sim: 92.95%
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XP_016299444.1 transcriptional adapter 2-beta isoform X1 |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0003682F:chromatin binding GO:0003713F:transcription coactivator activity GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0070461C:SAGA-type complex |
Transcription Regulation
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SRR941867_primary_scf7180002043601_1-2023
Len: 2,022 bp
Hits: 20
E-val: 8.50E-120
Sim: 90.24%
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XP_018925838.1 inhibitor of growth protein 2-like isoform X2 |
GO:0006325P:chromatin organization GO:0045893P:positive regulation of DNA-templated transcription GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002043783_1289-2244
Len: 955 bp
Hits: 20
E-val: 1.10E-186
Sim: 99.41%
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XP_016406635.1 zinc finger protein ZIC 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0021534P:cell proliferation in hindbrain GO:0021592P:fourth ventricle development GO:0048853P:forebrain morphogenesis GO:0060059P:embryonic retina morphogenesis in camera-type eye GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002044371_1945-3015
Len: 1,070 bp
Hits: 20
E-val: 9.90E-160
Sim: 93.81%
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XP_018981615.1 LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B-like |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0031491F:nucleosome binding GO:0005654C:nucleoplasm GO:0016514C:SWI/SNF complex GO:0035060C:brahma complex GO:0071565C:nBAF complex |
Transcription Regulation
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SRR941867_primary_scf7180002044798_1-1988
Len: 1,987 bp
Hits: 20
E-val: 4.60E-134
Sim: 90.57%
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XP_018967975.1 zinc finger protein 37-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002044800_215-2608
Len: 2,393 bp
Hits: 20
E-val: 7.40E-38
Sim: 66.34%
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CAG12009.1unnamed protein product, partial |
GO:0006396P:RNA processing GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000976F:transcription cis-regulatory region binding GO:0003723F:RNA binding GO:0004540F:RNA nuclease activity GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002044833_309-2417
Len: 2,108 bp
Hits: 20
E-val: 2.90E-118
Sim: 52.64%
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XP_018969502.1 PHD finger protein 20-like |
GO:0006355P:regulation of DNA-templated transcription GO:0006357P:regulation of transcription by RNA polymerase II GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0044545C:NSL complex GO:0071339C:MLL1 complex |
Transcription Regulation
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SRR941867_primary_scf7180002045032_923-1745
Len: 822 bp
Hits: 20
E-val: 1.40E-105
Sim: 97.35%
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XP_018981674.1 homeobox protein Hox-C9a-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009952P:anterior/posterior pattern specification GO:0009954P:proximal/distal pattern formation GO:0048704P:embryonic skeletal system morphogenesis GO:1901492P:positive regulation of lymphangiogenesis GO:2001213P:negative regulation of vasculogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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