Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002120375_1-1258
Len: 1,257 bp
Hits: 20
E-val: 4.80E-20
Sim: 76.99%
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XP_026080922.1storkhead-box protein 2-like isoform X1 |
GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002120447_1-1266
Len: 1,265 bp
Hits: 20
E-val: 5.30E-51
Sim: 64.58%
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XP_018945736.1 DNA-directed RNA polymerases I and III subunit RPAC1-like |
GO:0006351P:DNA-templated transcription GO:0042254P:ribosome biogenesis GO:0048703P:embryonic viscerocranium morphogenesis GO:0051216P:cartilage development GO:0000428C:DNA-directed RNA polymerase complex GO:0140513C:nuclear protein-containing complex |
Transcription Regulation
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SRR941867_primary_scf7180002121489_1-888
Len: 887 bp
Hits: 20
E-val: 7.50E-28
Sim: 96.98%
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KPP60508.1transcription factor RFX3-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007283P:spermatogenesis GO:0030030P:cell projection organization GO:0030154P:cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002122590_1-868
Len: 867 bp
Hits: 20
E-val: 5.40E-23
Sim: 99.71%
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XP_026067376.1zinc finger and BTB domain-containing protein 44-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002126673_1-924
Len: 923 bp
Hits: 20
E-val: 4.60E-20
Sim: 83.85%
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XP_026055320.1DNA (cytosine-5)-methyltransferase 3B-like isoform X1 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0032259P:methylation GO:0044027P:negative regulation of gene expression via chromosomal CpG island methylation GO:0060271P:cilium assembly GO:0061371P:determination of heart left/right asymmetry GO:0061484P:hematopoietic stem cell homeostasis GO:0070121P:Kupffer's vesicle development GO:1902036P:regulation of hematopoietic stem cell differentiation GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0051718F:DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates GO:0051719F:DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates GO:0051720F:DNA (cytosine-5-)-methyltransferase activity, acting on CpNpG substrates GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002127892_7-1124
Len: 1,117 bp
Hits: 20
E-val: 1.20E-17
Sim: 89.53%
|
XP_018972446.1 leucine-rich repeat-containing protein 28 |
GO:0035556P:intracellular signal transduction GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0046983F:protein dimerization activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002147264_1-3713
Len: 3,712 bp
Hits: 20
E-val: 7.70E-159
Sim: 94.48%
|
XP_018930358.1 Krueppel-like factor 5 isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
Transcription Regulation
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SRR941867_primary_scf7180002147379_1-4457
Len: 4,456 bp
Hits: 20
E-val: 0
Sim: 83.28%
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XP_018953565.1 LOW QUALITY PROTEIN: probable helicase senataxin |
GO:0006369P:termination of RNA polymerase II transcription GO:0001147F:transcription termination site sequence-specific DNA binding GO:0003723F:RNA binding GO:0004386F:helicase activity GO:0016604C:nuclear body |
Transcription Regulation
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SRR941867_primary_scf7180002148231_485-2202
Len: 1,717 bp
Hits: 20
E-val: 3.50E-74
Sim: 92.11%
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XP_018958995.1 homeobox even-skipped homolog protein 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009953P:dorsal/ventral pattern formation GO:0036342P:post-anal tail morphogenesis GO:0042661P:regulation of mesodermal cell fate specification GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002148569_2395-3138
Len: 743 bp
Hits: 20
E-val: 1.50E-109
Sim: 91.79%
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XP_018961377.1 cbp/p300-interacting transactivator 3-like |
GO:0042692P:muscle cell differentiation GO:0045893P:positive regulation of DNA-templated transcription GO:0003713F:transcription coactivator activity GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002149398_1144-3057
Len: 1,913 bp
Hits: 20
E-val: 0
Sim: 92.71%
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XP_018977426.1 transcriptional regulator Kaiso-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001817P:regulation of cytokine production GO:0002682P:regulation of immune system process GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002149548_1-2254
Len: 2,253 bp
Hits: 20
E-val: 9.60E-213
Sim: 90.94%
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XP_016378071.1 histone-lysine N-methyltransferase 2D-like |
GO:0006338P:chromatin remodeling GO:0032259P:methylation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003713F:transcription coactivator activity GO:0008270F:zinc ion binding GO:0140999F:histone H3K4 trimethyltransferase activity GO:0044666C:MLL3/4 complex |
Transcription Regulation
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SRR941867_primary_scf7180002150701_302-2163
Len: 1,861 bp
Hits: 20
E-val: 1.90E-25
Sim: 96.82%
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XP_024263948.1LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2-like, partial |
GO:0006367P:transcription initiation at RNA polymerase II promoter GO:0006413P:translational initiation GO:0000976F:transcription cis-regulatory region binding GO:0003682F:chromatin binding GO:0003743F:translation initiation factor activity GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0005669C:transcription factor TFIID complex |
Transcription Regulation
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SRR941867_primary_scf7180002152438_223-2227
Len: 2,004 bp
Hits: 20
E-val: 1.40E-103
Sim: 97.28%
|
XP_016403268.1 mothers against decapentaplegic homolog 6-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0010172P:embryonic body morphogenesis GO:0030154P:cell differentiation GO:0060395P:SMAD protein signal transduction GO:0046872F:metal ion binding GO:0070411F:I-SMAD binding GO:0140416F:transcription regulator inhibitor activity GO:0005737C:cytoplasm GO:0071144C:heteromeric SMAD protein complex |
Transcription Regulation
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SRR941867_primary_scf7180002153040_447-939
Len: 492 bp
Hits: 20
E-val: 3.30E-25
Sim: 90.88%
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ROI15854.1THO complex subunit 2 |
GO:0006397P:mRNA processing GO:0006406P:mRNA export from nucleus GO:0003729F:mRNA binding GO:0000445C:THO complex part of transcription export complex |
Transcription Regulation
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SRR941867_primary_scf7180002153235_1-1813
Len: 1,812 bp
Hits: 20
E-val: 5.40E-291
Sim: 91.18%
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XP_016300808.1 zinc finger and BTB domain-containing protein 38-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009952P:anterior/posterior pattern specification GO:0009953P:dorsal/ventral pattern formation GO:0060030P:dorsal convergence GO:0060031P:mediolateral intercalation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002153780_976-1723
Len: 747 bp
Hits: 20
E-val: 1.10E-37
Sim: 89.46%
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XP_018938716.1 homeobox protein BarH-like 2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002154135_1-1859
Len: 1,858 bp
Hits: 20
E-val: 2.10E-213
Sim: 79.34%
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RXN26556.1zinc finger and BTB domain-containing 25-like protein |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001817P:regulation of cytokine production GO:0002682P:regulation of immune system process GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002154502_195-1269
Len: 1,074 bp
Hits: 20
E-val: 6.70E-140
Sim: 97.47%
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XP_016397532.1 nucleus accumbens-associated protein 2-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific |
Transcription Regulation
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SRR941867_primary_scf7180002154585_1-1705
Len: 1,704 bp
Hits: 20
E-val: 6.20E-31
Sim: 80.05%
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XP_026096804.1AT-rich interactive domain-containing protein 1A-like isoform X2 |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0031491F:nucleosome binding GO:0005654C:nucleoplasm GO:0016514C:SWI/SNF complex GO:0035060C:brahma complex GO:0071565C:nBAF complex |
Transcription Regulation
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SRR941867_primary_scf7180002154652_1-2288
Len: 2,287 bp
Hits: 20
E-val: 1.10E-102
Sim: 56.43%
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XP_018940686.1 peroxisome proliferator-activated receptor delta-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007165P:signal transduction GO:0009893P:positive regulation of metabolic process GO:0030154P:cell differentiation GO:0048523P:negative regulation of cellular process GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0043229C:intracellular organelle |
Transcription Regulation
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SRR941867_primary_scf7180002154705_1-3062
Len: 3,061 bp
Hits: 20
E-val: 1.70E-39
Sim: 92.3%
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XP_026100549.1nuclear receptor corepressor 2-like isoform X3 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003714F:transcription corepressor activity GO:0000785C:chromatin GO:0005654C:nucleoplasm GO:0032991C:protein-containing complex |
Transcription Regulation
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SRR941867_primary_scf7180002155524_1-1612
Len: 1,611 bp
Hits: 20
E-val: 2.10E-12
Sim: 97.74%
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XP_018925198.1 UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0015787P:UDP-glucuronate transmembrane transport GO:0015789P:UDP-N-acetylgalactosamine transmembrane transport GO:1990569P:UDP-N-acetylglucosamine transmembrane transport GO:0003714F:transcription corepressor activity GO:0005461F:UDP-glucuronate transmembrane transporter activity GO:0005462F:UDP-N-acetylglucosamine transmembrane transporter activity GO:0005463F:UDP-N-acetylgalactosamine transmembrane transporter activity GO:0015297F:antiporter activity GO:0042826F:histone deacetylase binding GO:0005654C:nucleoplasm GO:0005794C:Golgi apparatus GO:0016020C:membrane |
Transcription Regulation
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SRR941867_primary_scf7180002156211_259-2008
Len: 1,749 bp
Hits: 20
E-val: 2.60E-40
Sim: 91.49%
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RXN08704.1zinc finger and BTB domain-containing 47-like protein |
GO:0007165P:signal transduction GO:0035630P:bone mineralization involved in bone maturation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0016791F:phosphatase activity GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002156406_1-1613
Len: 1,612 bp
Hits: 20
E-val: 8.70E-67
Sim: 93.01%
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XP_016089585.1 PHD finger protein 20-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007165P:signal transduction GO:0005096F:GTPase activator activity GO:0008270F:zinc ion binding GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0044545C:NSL complex GO:0071339C:MLL1 complex |
Transcription Regulation
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