Gene Function: Transcription Regulation

Functional and statistical data for significant genes

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Showing 1,388 results (Page 28 of 56)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR941867_primary_scf7180002156483_1-1338
Len: 1,337 bp
Hits: 20
E-val: 4.80E-188
Sim: 84.98%
 XP_016376088.1 zinc finger protein 91-like isoform X1
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0006508P:proteolysis
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0004252F:serine-type endopeptidase activity
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002156969_1-1964
Len: 1,963 bp
Hits: 20
E-val: 1.50E-81
Sim: 96.43%
 XP_018981679.1 homeobox protein Hox-C8a
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0031017P:exocrine pancreas development
GO:0031018P:endocrine pancreas development
GO:0035118P:embryonic pectoral fin morphogenesis
GO:0036268P:swimming
GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002157625_42-1280
Len: 1,238 bp
Hits: 20
E-val: 1.50E-231
Sim: 83.76%
 XP_018936596.1 LOW QUALITY PROTEIN: zinc finger protein 750-like
GO:0008544P:epidermis development
GO:0030154P:cell differentiation
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:1990841F:promoter-specific chromatin binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002158674_720-1667
Len: 947 bp
Hits: 20
E-val: 6.50E-22
Sim: 91.55%
 XP_026139231.1CREB-regulated transcription coactivator 2-like
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0051289P:protein homotetramerization
GO:0071320P:cellular response to cAMP
GO:0003713F:transcription coactivator activity
GO:0008140F:cAMP response element binding protein binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
Transcription Regulation
SRR941867_primary_scf7180002159933_1502-1768
Len: 266 bp
Hits: 20
E-val: 1.20E-34
Sim: 90.21%
 XP_018957171.1 homeobox protein DBX1-B
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0021515P:cell differentiation in spinal cord
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677F:DNA binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002160417_1-1147
Len: 1,146 bp
Hits: 20
E-val: 3.60E-115
Sim: 89.63%
 XP_018936392.1 dnaJ homolog subfamily B member 1-like
GO:0000122P:negative regulation of transcription by RNA polymerase II
GO:0002088P:lens development in camera-type eye
GO:0006457P:protein folding
GO:0003714F:transcription corepressor activity
GO:0030544F:Hsp70 protein binding
GO:0051082F:unfolded protein binding
GO:0005829C:cytosol
Transcription Regulation
SRR941867_primary_scf7180002160831_797-1615
Len: 818 bp
Hits: 20
E-val: 2.70E-149
Sim: 77.32%
 XP_018965341.1 class A basic helix-loop-helix protein 9-like
GO:0007423P:sensory organ development
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0061564P:axon development
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0046983F:protein dimerization activity
GO:0070888F:E-box binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002161046_827-2097
Len: 1,270 bp
Hits: 20
E-val: 8.30E-12
Sim: 93.33%
 AAH56832.1E2F transcription factor 4
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0046983F:protein dimerization activity
GO:0090575C:RNA polymerase II transcription regulator complex
Transcription Regulation
SRR941867_primary_scf7180002161223_1-2411
Len: 2,410 bp
Hits: 20
E-val: 1.40E-44
Sim: 97.64%
 XP_026135331.1THO complex subunit 2-like isoform X2
GO:0006397P:mRNA processing
GO:0006406P:mRNA export from nucleus
GO:0003729F:mRNA binding
GO:0000445C:THO complex part of transcription export complex
Transcription Regulation
SRR941867_primary_scf7180002161398_1-1951
Len: 1,950 bp
Hits: 20
E-val: 2.70E-46
Sim: 52.25%
 XP_016422672.1 lysine-specific demethylase 5B-B-like isoform X1
GO:0006325P:chromatin organization
GO:0006338P:chromatin remodeling
GO:0006355P:regulation of DNA-templated transcription
GO:0032259P:methylation
GO:0003677F:DNA binding
GO:0008168F:methyltransferase activity
GO:0008270F:zinc ion binding
GO:0034647F:histone H3K4me/H3K4me2/H3K4me3 demethylase activity
GO:0051213F:dioxygenase activity
GO:0000785C:chromatin
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002161649_1-943
Len: 942 bp
Hits: 20
E-val: 3.20E-37
Sim: 91.35%
 XP_018963246.1 putative transcription factor Ovo-like 1
GO:0001755P:neural crest cell migration
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0009913P:epidermal cell differentiation
GO:0070285P:pigment cell development
GO:0090150P:establishment of protein localization to membrane
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002162223_249-1609
Len: 1,360 bp
Hits: 20
E-val: 2.30E-52
Sim: 88.35%
 XP_018941568.1 zinc finger protein 668-like isoform X1
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002162302_268-1426
Len: 1,158 bp
Hits: 20
E-val: 2.80E-35
Sim: 93.87%
 XP_018972869.1 paired box protein Pax-6-like isoform X2
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002162691_1-1423
Len: 1,422 bp
Hits: 20
E-val: 3.80E-42
Sim: 99.28%
 XP_010785743.1 transcription initiation factor IIB-like
GO:0001174P:transcriptional start site selection at RNA polymerase II promoter
GO:0006338P:chromatin remodeling
GO:0006413P:translational initiation
GO:0051123P:RNA polymerase II preinitiation complex assembly
GO:1990114P:RNA polymerase II core complex assembly
GO:0000979F:RNA polymerase II core promoter sequence-specific DNA binding
GO:0003743F:translation initiation factor activity
GO:0008270F:zinc ion binding
GO:0016251F:RNA polymerase II general transcription initiation factor activity
GO:0017025F:TBP-class protein binding
GO:0032931F:histone H3K56 acetyltransferase activity
GO:0036408F:histone H3K14 acetyltransferase activity
GO:0043992F:histone H3K9 acetyltransferase activity
GO:0043993F:histone H3K18 acetyltransferase activity
GO:0043994F:histone H3K23 acetyltransferase activity
GO:0043995F:histone H4K5 acetyltransferase activity
GO:0043996F:histone H4K8 acetyltransferase activity
GO:0043997F:histone H4K12 acetyltransferase activity
GO:0043999F:histone H2AK5 acetyltransferase activity
GO:0044012F:histone H2AK9 acetyltransferase activity
GO:0044014F:histone H2BK5 acetyltransferase activity
GO:0044015F:histone H2BK12 acetyltransferase activity
GO:0044016F:histone H3K4 acetyltransferase activity
GO:0044017F:histone H3K27 acetyltransferase activity
GO:0044018F:histone H3K36 acetyltransferase activity
GO:0046972F:histone H4K16 acetyltransferase activity
GO:0140908F:histone H3K122 acetyltransferase activity
GO:0005634C:nucleus
GO:0005694C:chromosome
GO:0097550C:transcription preinitiation complex
Transcription Regulation
SRR941867_primary_scf7180002164155_218-3228
Len: 3,010 bp
Hits: 20
E-val: 1.90E-163
Sim: 94.1%
 XP_018943542.1 PR domain zinc finger protein 1-like
GO:0000122P:negative regulation of transcription by RNA polymerase II
GO:0045165P:cell fate commitment
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0016740F:transferase activity
GO:0005634C:nucleus
GO:0005737C:cytoplasm
Transcription Regulation
SRR941867_primary_scf7180002164206_1-1907
Len: 1,906 bp
Hits: 20
E-val: 5.20E-18
Sim: 59.3%
 XP_018963462.1 bromodomain-containing protein 7-like isoform X1
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0070577F:obsolete lysine-acetylated histone binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002165537_108-2189
Len: 2,081 bp
Hits: 20
E-val: 1.90E-26
Sim: 84.09%
 XP_018970861.1 protein spinster homolog 1-like, partial
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002165911_1172-1708
Len: 536 bp
Hits: 20
E-val: 5.10E-88
Sim: 81.41%
 XP_018957455.1 nucleus accumbens-associated protein 2-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
Transcription Regulation
SRR941867_primary_scf7180002166100_1-1773
Len: 1,772 bp
Hits: 20
E-val: 1.40E-38
Sim: 62.86%
 XP_026103653.1protein SCAI-like isoform X1
GO:0006351P:DNA-templated transcription
GO:0045892P:negative regulation of DNA-templated transcription
GO:0003714F:transcription corepressor activity
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002167271_1-1824
Len: 1,823 bp
Hits: 20
E-val: 5.80E-35
Sim: 88.52%
 XP_016116165.1 zinc finger protein 239-like, partial
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
GO:0032991C:protein-containing complex
Transcription Regulation
SRR941867_primary_scf7180002167757_513-1622
Len: 1,109 bp
Hits: 20
E-val: 1.40E-169
Sim: 90.16%
 XP_016300365.1 alpha-internexin-like
GO:0006355P:regulation of DNA-templated transcription
GO:0045109P:intermediate filament organization
GO:0048812P:neuron projection morphogenesis
GO:0099185P:postsynaptic intermediate filament cytoskeleton organization
GO:0003700F:DNA-binding transcription factor activity
GO:0043565F:sequence-specific DNA binding
GO:0099184F:structural constituent of postsynaptic intermediate filament cytoskeleton
GO:0005737C:cytoplasm
GO:0005882C:intermediate filament
GO:0099160C:postsynaptic intermediate filament cytoskeleton
Transcription Regulation
SRR941867_primary_scf7180002168383_212-1141
Len: 929 bp
Hits: 20
E-val: 1.10E-165
Sim: 92.01%
 XP_018957746.1 nuclear receptor coactivator 4-like
GO:0006879P:intracellular iron ion homeostasis
GO:0009725P:response to hormone
GO:0045893P:positive regulation of DNA-templated transcription
GO:0003713F:transcription coactivator activity
Transcription Regulation
SRR941867_primary_scf7180002168666_1-1334
Len: 1,333 bp
Hits: 20
E-val: 9.20E-22
Sim: 97.57%
 XP_018967030.1 forkhead box protein P1-B-like
GO:0000122P:negative regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002170120_323-1028
Len: 705 bp
Hits: 20
E-val: 3.10E-24
Sim: 63.14%
 XP_016424420.1 phosphatidate phosphatase LPIN2-like
GO:0009062P:fatty acid catabolic process
GO:0019432P:triglyceride biosynthetic process
GO:0032869P:cellular response to insulin stimulus
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0003713F:transcription coactivator activity
GO:0008195F:phosphatidate phosphatase activity
GO:0016787F:hydrolase activity
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002170143_279-656
Len: 377 bp
Hits: 20
E-val: 5.20E-39
Sim: 72.58%
 XP_026072232.1negative elongation factor A
GO:0030852P:regulation of granulocyte differentiation
GO:0034244P:negative regulation of transcription elongation by RNA polymerase II
GO:0032021C:NELF complex
Transcription Regulation