Gene Function: Transcription Regulation

Functional and statistical data for significant genes

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Showing 1,388 results (Page 29 of 56)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR941867_primary_scf7180002172463_1-1215
Len: 1,214 bp
Hits: 18
E-val: 3.00E-19
Sim: 79.76%
 XP_016424420.1 phosphatidate phosphatase LPIN2-like
GO:0009062P:fatty acid catabolic process
GO:0019432P:triglyceride biosynthetic process
GO:0032869P:cellular response to insulin stimulus
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0003713F:transcription coactivator activity
GO:0008195F:phosphatidate phosphatase activity
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002174467_1-1400
Len: 1,399 bp
Hits: 20
E-val: 9.00E-28
Sim: 94.17%
 XP_026096740.1grainyhead-like protein 2 homolog
GO:0021555P:midbrain-hindbrain boundary morphogenesis
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0048839P:inner ear development
GO:0060561P:apoptotic process involved in morphogenesis
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0005634C:nucleus
GO:0016020C:membrane
Transcription Regulation
SRR941867_primary_scf7180002175310_483-990
Len: 507 bp
Hits: 20
E-val: 2.40E-26
Sim: 87.97%
 XP_026062425.1CREB-regulated transcription coactivator 1-like isoform X3
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0051289P:protein homotetramerization
GO:0008140F:cAMP response element binding protein binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
Transcription Regulation
SRR941867_primary_scf7180002176515_264-1489
Len: 1,225 bp
Hits: 20
E-val: 1.80E-165
Sim: 78%
 XP_018943201.1 LOW QUALITY PROTEIN: msx2-interacting protein-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0060047P:heart contraction
GO:0003729F:mRNA binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002176556_1-1067
Len: 1,066 bp
Hits: 20
E-val: 5.30E-28
Sim: 50.85%
 XP_018928121.1 MHC class II regulatory factor RFX1-like
GO:0006355P:regulation of DNA-templated transcription
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677F:DNA binding
GO:0003700F:DNA-binding transcription factor activity
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002176695_1-860
Len: 859 bp
Hits: 20
E-val: 6.80E-26
Sim: 91.95%
 XP_026076570.1forkhead box protein K2-like isoform X2
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0045893P:positive regulation of DNA-templated transcription
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002177089_467-1055
Len: 588 bp
Hits: 20
E-val: 8.20E-23
Sim: 86.45%
 XP_026058679.1bromodomain-containing protein 1-like isoform X1
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0008270F:zinc ion binding
GO:0070776C:MOZ/MORF histone acetyltransferase complex
Transcription Regulation
SRR941867_primary_scf7180002179028_1-2242
Len: 2,241 bp
Hits: 20
E-val: 6.70E-25
Sim: 96.47%
 XP_018957937.1 general transcription factor IIE subunit 2-like isoform X1
GO:0006367P:transcription initiation at RNA polymerase II promoter
GO:0001097F:TFIIH-class transcription factor complex binding
GO:0003677F:DNA binding
GO:0005673C:transcription factor TFIIE complex
Transcription Regulation
SRR941867_primary_scf7180002179670_1-570
Len: 569 bp
Hits: 20
E-val: 2.40E-19
Sim: 96.35%
 XP_018964032.1 LIM/homeobox protein LMX-1.2-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0030182P:neuron differentiation
GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0046872F:metal ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002180004_1-1432
Len: 1,431 bp
Hits: 20
E-val: 5.10E-34
Sim: 86.83%
 XP_018976909.1 prospero homeobox protein 1-like isoform X1
GO:0001946P:lymphangiogenesis
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0021884P:forebrain neuron development
GO:0030239P:myofibril assembly
GO:0048885P:neuromast deposition
GO:0048886P:neuromast hair cell differentiation
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002181365_1-1052
Len: 1,051 bp
Hits: 20
E-val: 9.10E-65
Sim: 76.58%
 XP_026073563.1mediator of RNA polymerase II transcription subunit 14-like isoform X2
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0014033P:neural crest cell differentiation
GO:0019827P:stem cell population maintenance
GO:0021591P:ventricular system development
GO:0033081P:regulation of T cell differentiation in thymus
GO:0048514P:blood vessel morphogenesis
GO:0048703P:embryonic viscerocranium morphogenesis
GO:0003712F:transcription coregulator activity
GO:0016592C:mediator complex
GO:0070847C:core mediator complex
Transcription Regulation
SRR941867_primary_scf7180002181883_1-608
Len: 607 bp
Hits: 20
E-val: 2.20E-39
Sim: 93.65%
 XP_018959437.1 epidermal growth factor receptor substrate 15-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0006457P:protein folding
GO:0006897P:endocytosis
GO:0016197P:endosomal transport
GO:0033077P:T cell differentiation in thymus
GO:0036503P:ERAD pathway
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677F:DNA binding
GO:0005509F:calcium ion binding
GO:0045296F:cadherin binding
GO:0051082F:unfolded protein binding
GO:0005634C:nucleus
GO:0005789C:endoplasmic reticulum membrane
GO:0030132C:clathrin coat of coated pit
Transcription Regulation
SRR941867_primary_scf7180002183035_1-849
Len: 848 bp
Hits: 20
E-val: 1.70E-37
Sim: 95.3%
 RXN16708.1AT-rich interactive domain-containing 1B-like protein
GO:0006338P:chromatin remodeling
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0035176P:social behavior
GO:0036269P:swimming behavior
GO:0045893P:positive regulation of DNA-templated transcription
GO:0003677F:DNA binding
GO:0031491F:nucleosome binding
GO:0005654C:nucleoplasm
GO:0016514C:SWI/SNF complex
GO:0035060C:brahma complex
GO:0071565C:nBAF complex
Transcription Regulation
SRR941867_primary_scf7180002183323_1-581
Len: 580 bp
Hits: 20
E-val: 1.00E-49
Sim: 97.99%
 XP_026098282.1GATA-binding factor 2-like isoform X3
GO:0000122P:negative regulation of transcription by RNA polymerase II
GO:0003190P:atrioventricular valve formation
GO:0021514P:ventral spinal cord interneuron differentiation
GO:0035912P:dorsal aorta morphogenesis
GO:0045165P:cell fate commitment
GO:0045766P:positive regulation of angiogenesis
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0048821P:erythrocyte development
GO:0060215P:primitive hemopoiesis
GO:1902895P:positive regulation of miRNA transcription
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002184101_1-1372
Len: 1,371 bp
Hits: 20
E-val: 6.80E-20
Sim: 81.34%
 XP_026112724.1neuronal PAS domain-containing protein 2-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0009648P:photoperiodism
GO:0032922P:circadian regulation of gene expression
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0046983F:protein dimerization activity
GO:0005737C:cytoplasm
GO:1990513C:CLOCK-BMAL transcription complex
Transcription Regulation
SRR941867_primary_scf7180002185589_1-1056
Len: 1,055 bp
Hits: 20
E-val: 6.00E-16
Sim: 100%
 XP_008009618.1 MBT domain-containing protein 1 isoform X1
GO:0006325P:chromatin organization
GO:0045892P:negative regulation of DNA-templated transcription
GO:0003682F:chromatin binding
GO:0008270F:zinc ion binding
GO:0042393F:histone binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002185804_1-1271
Len: 1,270 bp
Hits: 20
E-val: 6.50E-25
Sim: 96.73%
 XP_013998481.1 zinc finger and BTB domain-containing protein 10-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002186163_1-835
Len: 834 bp
Hits: 20
E-val: 4.80E-77
Sim: 79.88%
 XP_026116390.1zinc finger protein 827-like isoform X2
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002186203_801-1369
Len: 568 bp
Hits: 20
E-val: 3.10E-19
Sim: 94.18%
 XP_018942968.1 homeobox protein BarH-like 1
GO:0002053P:positive regulation of mesenchymal cell proliferation
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0051216P:cartilage development
GO:0060037P:pharyngeal system development
GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002186994_107-926
Len: 819 bp
Hits: 20
E-val: 4.20E-49
Sim: 96.91%
 XP_026100549.1nuclear receptor corepressor 2-like isoform X3
GO:0000122P:negative regulation of transcription by RNA polymerase II
GO:0003714F:transcription corepressor activity
GO:0000785C:chromatin
GO:0005654C:nucleoplasm
GO:0032991C:protein-containing complex
Transcription Regulation
SRR941867_primary_scf7180002187266_1-828
Len: 827 bp
Hits: 20
E-val: 1.20E-120
Sim: 97.72%
 XP_018926433.1 LOW QUALITY PROTEIN: N-myc proto-oncogene protein-like
GO:0006355P:regulation of DNA-templated transcription
GO:0003677F:DNA binding
GO:0003700F:DNA-binding transcription factor activity
GO:0046983F:protein dimerization activity
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002187332_1-1131
Len: 1,130 bp
Hits: 20
E-val: 4.10E-47
Sim: 96.75%
 XP_018923250.1 LOW QUALITY PROTEIN: ankyrin repeat and SOCS box protein 10-like
GO:0016567P:protein ubiquitination
GO:0035556P:intracellular signal transduction
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0000976F:transcription cis-regulatory region binding
GO:0061629F:RNA polymerase II-specific DNA-binding transcription factor binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
Transcription Regulation
SRR941867_primary_scf7180002188249_1-1412
Len: 1,411 bp
Hits: 20
E-val: 3.80E-34
Sim: 88.94%
 XP_026102651.1lysosomal amino acid transporter 1 homolog isoform X1
GO:0006355P:regulation of DNA-templated transcription
GO:1990822P:basic amino acid transmembrane transport
GO:0003700F:DNA-binding transcription factor activity
GO:0008270F:zinc ion binding
GO:0015174F:basic amino acid transmembrane transporter activity
GO:0016874F:ligase activity
GO:0043565F:sequence-specific DNA binding
GO:0005634C:nucleus
GO:0016020C:membrane
Transcription Regulation
SRR941867_primary_scf7180002189203_1-1900
Len: 1,899 bp
Hits: 20
E-val: 4.60E-51
Sim: 79.41%
 XP_026092003.1structural maintenance of chromosomes protein 3-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0007064P:mitotic sister chromatid cohesion
GO:0031101P:fin regeneration
GO:0051301P:cell division
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003690F:double-stranded DNA binding
GO:0003723F:RNA binding
GO:0005524F:ATP binding
GO:0016887F:ATP hydrolysis activity
GO:0005634C:nucleus
GO:0030892C:mitotic cohesin complex
Transcription Regulation
SRR941867_primary_scf7180002189552_430-795
Len: 365 bp
Hits: 20
E-val: 1.60E-61
Sim: 99.29%
 XP_016121670.1 LIM/homeobox protein Lhx2-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0030182P:neuron differentiation
GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0046872F:metal ion binding
GO:0005634C:nucleus
Transcription Regulation