Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924327_primary_scf7180002235728_1-1023
Len: 1,022 bp
Hits: 20
E-val: 1.90E-59
Sim: 94.94%
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XP_016105507.1 LOW QUALITY PROTEIN: ETS translocation variant 4-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009792P:embryo development ending in birth or egg hatching GO:0035108P:limb morphogenesis GO:0035778P:pronephric nephron tubule epithelial cell differentiation GO:0045893P:positive regulation of DNA-templated transcription GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002235756_1-1210
Len: 1,209 bp
Hits: 20
E-val: 3.80E-22
Sim: 74.06%
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CAG11131.1unnamed protein product |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000976F:transcription cis-regulatory region binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002236224_1-976
Len: 975 bp
Hits: 20
E-val: 3.20E-24
Sim: 92.2%
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XP_016397845.1 methyl-CpG-binding domain protein 2-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0006346P:DNA methylation-dependent constitutive heterochromatin formation GO:0032259P:methylation GO:0008168F:methyltransferase activity GO:0008327F:methyl-CpG binding GO:0005654C:nucleoplasm |
Transcription Regulation
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SRR924327_primary_scf7180002236233_1-1047
Len: 1,046 bp
Hits: 20
E-val: 4.00E-145
Sim: 90.51%
|
XP_018955118.1 interferon regulatory factor 2-binding protein 2-A-like |
GO:0001889P:liver development GO:0006357P:regulation of transcription by RNA polymerase II GO:0030223P:neutrophil differentiation GO:0045892P:negative regulation of DNA-templated transcription GO:0003714F:transcription corepressor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002236372_671-1135
Len: 464 bp
Hits: 20
E-val: 3.30E-59
Sim: 66.97%
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XP_018968139.1 homeobox protein engrailed-1a-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030182P:neuron differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002236692_1-1127
Len: 1,126 bp
Hits: 20
E-val: 6.60E-21
Sim: 97.53%
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XP_018943963.1 DNA helicase INO80-like |
GO:0006281P:DNA repair GO:0006338P:chromatin remodeling GO:0006351P:DNA-templated transcription GO:0060255P:regulation of macromolecule metabolic process GO:0003677F:DNA binding GO:0004386F:helicase activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0042393F:histone binding GO:0140658F:ATP-dependent chromatin remodeler activity GO:0031011C:Ino80 complex |
Transcription Regulation
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SRR924327_primary_scf7180002236833_1-688
Len: 687 bp
Hits: 20
E-val: 1.30E-115
Sim: 90.79%
|
XP_018926343.1 homeobox protein TGIF2-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002237150_1-1368
Len: 1,367 bp
Hits: 20
E-val: 1.20E-24
Sim: 73.57%
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XP_018972514.1 LOW QUALITY PROTEIN: RNA polymerase II-associated factor 1 homolog, partial |
GO:0006368P:transcription elongation by RNA polymerase II GO:0000993F:RNA polymerase II complex binding GO:0003682F:chromatin binding GO:0016593C:Cdc73/Paf1 complex |
Transcription Regulation
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SRR924327_primary_scf7180002237276_1-712
Len: 711 bp
Hits: 20
E-val: 7.20E-106
Sim: 93.16%
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NP_571619.1homeobox protein Hox-A11a |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0060272P:embryonic skeletal joint morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005654C:nucleoplasm |
Transcription Regulation
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SRR924327_primary_scf7180002237385_240-919
Len: 679 bp
Hits: 20
E-val: 8.00E-22
Sim: 51.48%
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XP_003200736.1breast cancer metastasis-suppressor 1-like protein-A isoform X1 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0042826F:histone deacetylase binding GO:0005634C:nucleus GO:0005654C:nucleoplasm GO:0070822C:Sin3-type complex |
Transcription Regulation
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SRR924327_primary_scf7180002238220_1-1361
Len: 1,360 bp
Hits: 20
E-val: 1.00E-23
Sim: 97.38%
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XP_016086106.1 homeobox protein Meis2-like |
GO:0001947P:heart looping GO:0003209P:cardiac atrium morphogenesis GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002245033_446-2374
Len: 1,928 bp
Hits: 20
E-val: 2.90E-157
Sim: 95.85%
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XP_016143531.1 AT-rich interactive domain-containing protein 1A-like isoform X1 |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0031491F:nucleosome binding GO:0005654C:nucleoplasm GO:0016514C:SWI/SNF complex GO:0035060C:brahma complex GO:0071565C:nBAF complex |
Transcription Regulation
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SRR924327_primary_scf7180002245354_257-1510
Len: 1,253 bp
Hits: 20
E-val: 2.00E-228
Sim: 97.55%
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XP_018918869.1 zinc finger and BTB domain-containing protein 16-A-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0002682P:regulation of immune system process GO:0016567P:protein ubiquitination GO:0032481P:positive regulation of type I interferon production GO:0050767P:regulation of neurogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924327_primary_scf7180002245405_771-1295
Len: 524 bp
Hits: 20
E-val: 6.50E-88
Sim: 97.03%
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XP_016325032.1 achaete-scute homolog 1b-like |
GO:0007423P:sensory organ development GO:0030182P:neuron differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0050767P:regulation of neurogenesis GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0090575C:RNA polymerase II transcription regulator complex |
Transcription Regulation
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SRR924327_primary_scf7180002245472_1-1411
Len: 1,410 bp
Hits: 20
E-val: 8.00E-149
Sim: 89.73%
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RXN06349.1myelin transcription factor 1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0030154P:cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002245615_1-2007
Len: 2,006 bp
Hits: 20
E-val: 3.80E-197
Sim: 88.86%
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XP_018927572.1 LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1A-like |
GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0006508P:proteolysis GO:0032259P:methylation GO:0003723F:RNA binding GO:0004252F:serine-type endopeptidase activity GO:0008270F:zinc ion binding GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0042800F:histone H3K4 methyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0140908F:histone H3K122 acetyltransferase activity GO:0000775C:chromosome, centromeric region GO:0048188C:Set1C/COMPASS complex |
Transcription Regulation
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SRR924327_primary_scf7180002245800_86-1600
Len: 1,514 bp
Hits: 20
E-val: 2.10E-272
Sim: 97.02%
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XP_018928543.1 LOW QUALITY PROTEIN: zinc finger homeobox protein 4-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002245955_285-785
Len: 500 bp
Hits: 20
E-val: 1.60E-59
Sim: 76.55%
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XP_018967621.1 DNA-binding protein inhibitor ID-1-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0032922P:circadian regulation of gene expression GO:0045664P:regulation of neuron differentiation GO:0050768P:negative regulation of neurogenesis GO:0003677F:DNA binding GO:0003714F:transcription corepressor activity GO:0046983F:protein dimerization activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924327_primary_scf7180002246622_1-668
Len: 667 bp
Hits: 20
E-val: 7.00E-71
Sim: 98.17%
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XP_018924188.1 diencephalon/mesencephalon homeobox protein 1-A |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007346P:regulation of mitotic cell cycle GO:0030901P:midbrain development GO:0045892P:negative regulation of DNA-templated transcription GO:0050767P:regulation of neurogenesis GO:0061074P:regulation of neural retina development GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002246797_462-1553
Len: 1,091 bp
Hits: 20
E-val: 1.40E-196
Sim: 97.08%
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XP_018927591.1 zinc finger and BTB domain-containing protein 44-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002246960_945-1193
Len: 248 bp
Hits: 20
E-val: 2.50E-26
Sim: 99.92%
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XP_016120713.1 metastasis-associated protein MTA1-like, partial |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0006302P:double-strand break repair GO:0010212P:response to ionizing radiation GO:0045893P:positive regulation of DNA-templated transcription GO:0003682F:chromatin binding GO:0003713F:transcription coactivator activity GO:0003714F:transcription corepressor activity GO:0008270F:zinc ion binding GO:0042826F:histone deacetylase binding GO:0043565F:sequence-specific DNA binding GO:0016581C:NuRD complex |
Transcription Regulation
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SRR924327_primary_scf7180002247623_1-1060
Len: 1,059 bp
Hits: 20
E-val: 2.90E-71
Sim: 80.57%
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XP_026118914.1activating transcription factor 7-interacting protein 1-like isoform X1 |
GO:0006355P:regulation of DNA-templated transcription GO:0003712F:transcription coregulator activity GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
Transcription Regulation
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SRR924327_primary_scf7180002247867_318-1076
Len: 758 bp
Hits: 20
E-val: 4.20E-104
Sim: 91.47%
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XP_018973873.1 cbp/p300-interacting transactivator 3-like |
GO:0042692P:muscle cell differentiation GO:0045893P:positive regulation of DNA-templated transcription GO:0003713F:transcription coactivator activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002248654_720-1256
Len: 536 bp
Hits: 20
E-val: 3.00E-64
Sim: 92.99%
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XP_018931139.1 homeobox protein Hox-B5b |
GO:0001708P:cell fate specification GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0009952P:anterior/posterior pattern specification GO:0010002P:cardioblast differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002250424_1-878
Len: 877 bp
Hits: 20
E-val: 8.40E-40
Sim: 85.78%
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XP_016402326.1 nuclear pore complex protein Nup133-like |
GO:0000972P:transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery GO:0006606P:protein import into nucleus GO:0016973P:poly(A)+ mRNA export from nucleus GO:0017056F:structural constituent of nuclear pore GO:0000776C:kinetochore GO:0031080C:nuclear pore outer ring |
Transcription Regulation
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