Gene Function: Transcription Regulation

Functional and statistical data for significant genes

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Showing 1,388 results (Page 30 of 56)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR941867_primary_scf7180002189887_675-1238
Len: 563 bp
Hits: 20
E-val: 5.50E-101
Sim: 94.62%
 XP_018970669.1 homeobox protein SIX4-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
GO:0005667C:transcription regulator complex
Transcription Regulation
SRR941867_primary_scf7180002190988_448-954
Len: 506 bp
Hits: 20
E-val: 1.30E-72
Sim: 68.78%
 XP_018976343.1 tetratricopeptide repeat protein 21A-like
GO:0006355P:regulation of DNA-templated transcription
GO:0035721P:intraciliary retrograde transport
GO:0061512P:protein localization to cilium
GO:0003700F:DNA-binding transcription factor activity
GO:0005929C:cilium
GO:0030991C:intraciliary transport particle A
Transcription Regulation
SRR941867_primary_scf7180002192942_58-1631
Len: 1,573 bp
Hits: 20
E-val: 3.00E-40
Sim: 58.55%
 XP_016121513.1 DNA-binding protein RFX5-like, partial
GO:0006355P:regulation of DNA-templated transcription
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0051603P:proteolysis involved in protein catabolic process
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677F:DNA binding
GO:0003700F:DNA-binding transcription factor activity
GO:0000502C:proteasome complex
GO:0005634C:nucleus
GO:0005839C:proteasome core complex
Transcription Regulation
SRR941867_primary_scf7180002194387_355-789
Len: 434 bp
Hits: 20
E-val: 2.10E-20
Sim: 72.76%
 XP_018978224.1 calcium-responsive transactivator-like
GO:0006325P:chromatin organization
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0050775P:positive regulation of dendrite morphogenesis
GO:0003713F:transcription coactivator activity
GO:0005634C:nucleus
GO:0005654C:nucleoplasm
Transcription Regulation
SRR941867_primary_scf7180002194882_1-502
Len: 501 bp
Hits: 20
E-val: 8.30E-16
Sim: 98.66%
 XP_018956033.1 bromodomain-containing protein 3
GO:0006338P:chromatin remodeling
GO:0006355P:regulation of DNA-templated transcription
GO:0000785C:chromatin
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002195377_1-850
Len: 849 bp
Hits: 20
E-val: 6.50E-13
Sim: 99.31%
 NP_001002456.1histone-lysine N-methyltransferase SETD7
GO:0003007P:heart morphogenesis
GO:0006338P:chromatin remodeling
GO:0018026P:peptidyl-lysine monomethylation
GO:0018027P:peptidyl-lysine dimethylation
GO:0045893P:positive regulation of DNA-templated transcription
GO:0070828P:heterochromatin organization
GO:0003682F:chromatin binding
GO:0140945F:histone H3K4 monomethyltransferase activity
GO:0005634C:nucleus
GO:0005694C:chromosome
GO:0016020C:membrane
Transcription Regulation
SRR941867_primary_scf7180002195478_1-1597
Len: 1,596 bp
Hits: 20
E-val: 3.20E-29
Sim: 92.94%
 ROL43304.1Zinc finger protein 423
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0007399P:nervous system development
GO:0030154P:cell differentiation
GO:0008270F:zinc ion binding
GO:0043035F:chromatin insulator sequence binding
GO:0005634C:nucleus
GO:0005694C:chromosome
Transcription Regulation
SRR941867_primary_scf7180002196636_1-763
Len: 762 bp
Hits: 20
E-val: 2.90E-44
Sim: 84.02%
 XP_018937805.1 transcription cofactor vestigial-like protein 2
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002196855_718-1163
Len: 445 bp
Hits: 20
E-val: 4.10E-59
Sim: 87.16%
 XP_018981877.1 homeobox protein aristaless-like 4
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002196955_1-1200
Len: 1,199 bp
Hits: 20
E-val: 7.50E-23
Sim: 97.62%
 XP_026123713.1paired amphipathic helix protein Sin3a-like isoform X1
GO:0000122P:negative regulation of transcription by RNA polymerase II
GO:0007507P:heart development
GO:0003714F:transcription corepressor activity
GO:0070822C:Sin3-type complex
Transcription Regulation
SRR941867_primary_scf7180002197567_1-821
Len: 820 bp
Hits: 5
E-val: 4.40E-14
Sim: 53.67%
 XP_016144528.1 transcription initiation factor IIA subunit 1
GO:0006366P:transcription by RNA polymerase II
GO:0006367P:transcription initiation at RNA polymerase II promoter
GO:0005634C:nucleus
GO:0005672C:transcription factor TFIIA complex
Transcription Regulation
SRR941867_primary_scf7180002199869_126-1872
Len: 1,746 bp
Hits: 20
E-val: 4.40E-40
Sim: 98.46%
 XP_018960452.1 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0003712F:transcription coregulator activity
GO:0016592C:mediator complex
Transcription Regulation
SRR941867_primary_scf7180002200086_1-1130
Len: 1,129 bp
Hits: 20
E-val: 2.40E-18
Sim: 99.25%
 NP_001038411.1protein lin-9 homolog
GO:0006302P:double-strand break repair
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0045087P:innate immune response
GO:0051726P:regulation of cell cycle
GO:0070212P:protein poly-ADP-ribosylation
GO:0003677F:DNA binding
GO:0003950F:NAD+ poly-ADP-ribosyltransferase activity
GO:0008270F:zinc ion binding
GO:0016779F:nucleotidyltransferase activity
GO:0140805F:NAD+-protein-serine ADP-ribosyltransferase activity
GO:0140806F:NAD+-protein-aspartate ADP-ribosyltransferase activity
GO:0140807F:NAD+-protein-glutamate ADP-ribosyltransferase activity
GO:0140808F:NAD+-protein-tyrosine ADP-ribosyltransferase activity
GO:0140815F:NAD+-protein-histidine ADP-ribosyltransferase activity
GO:0005654C:nucleoplasm
GO:0005694C:chromosome
GO:0005730C:nucleolus
GO:0005829C:cytosol
GO:0017053C:transcription repressor complex
Transcription Regulation
SRR941867_primary_scf7180002202520_1-1314
Len: 1,313 bp
Hits: 20
E-val: 9.70E-24
Sim: 100%
 XP_026113166.1PHD finger protein 14-like isoform X2
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0008270F:zinc ion binding
Transcription Regulation
SRR941867_primary_scf7180002204333_533-1554
Len: 1,021 bp
Hits: 20
E-val: 4.60E-21
Sim: 97.65%
 XP_026062324.1thymocyte selection-associated high mobility group box protein TOX-like isoform X2
GO:0002521P:leukocyte differentiation
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0031490F:chromatin DNA binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002207848_1-1349
Len: 1,348 bp
Hits: 20
E-val: 1.40E-17
Sim: 94.34%
 XP_026132551.1trinucleotide repeat-containing gene 6B protein-like
GO:0006417P:regulation of translation
GO:0035195P:miRNA-mediated post-transcriptional gene silencing
GO:0060213P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0003723F:RNA binding
GO:0000932C:P-body
GO:0005654C:nucleoplasm
GO:0005829C:cytosol
Transcription Regulation
SRR941867_primary_scf7180002209160_710-1082
Len: 372 bp
Hits: 20
E-val: 4.40E-30
Sim: 93.01%
 XP_018930978.1 short stature homeobox protein 2 isoform X1
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0007507P:heart development
GO:0008016P:regulation of heart contraction
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:1990837F:sequence-specific double-stranded DNA binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002212330_263-1091
Len: 828 bp
Hits: 20
E-val: 7.90E-64
Sim: 61.19%
 XP_016091757.1 visual system homeobox 1-like isoform X1
GO:0021501P:prechordal plate formation
GO:0030900P:forebrain development
GO:0045892P:negative regulation of DNA-templated transcription
GO:0048329P:negative regulation of axial mesodermal cell fate specification
GO:0048348P:paraxial mesodermal cell fate specification
GO:0000976F:transcription cis-regulatory region binding
GO:0003682F:chromatin binding
Transcription Regulation
SRR941867_primary_scf7180002212924_425-1062
Len: 637 bp
Hits: 20
E-val: 1.20E-27
Sim: 86.44%
 XP_018965477.1 LOW QUALITY PROTEIN: DNA helicase INO80-like
GO:0006281P:DNA repair
GO:0006338P:chromatin remodeling
GO:0006351P:DNA-templated transcription
GO:0060255P:regulation of macromolecule metabolic process
GO:0003677F:DNA binding
GO:0005524F:ATP binding
GO:0016887F:ATP hydrolysis activity
GO:0042393F:histone binding
GO:0140658F:ATP-dependent chromatin remodeler activity
GO:0031011C:Ino80 complex
Transcription Regulation
SRR941867_primary_scf7180002213781_1-872
Len: 871 bp
Hits: 20
E-val: 2.80E-67
Sim: 95.79%
 XP_016330872.1 paired box protein Pax-9-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0045658P:regulation of neutrophil differentiation
GO:0050830P:defense response to Gram-positive bacterium
GO:0060021P:roof of mouth development
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002214199_1-1100
Len: 1,099 bp
Hits: 20
E-val: 1.20E-19
Sim: 99.5%
 XP_026069543.1atherin-like
GO:0006325P:chromatin organization
GO:0045892P:negative regulation of DNA-templated transcription
GO:0003677F:DNA binding
GO:0003682F:chromatin binding
GO:0042393F:histone binding
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002215076_1-999
Len: 998 bp
Hits: 20
E-val: 2.40E-67
Sim: 94.66%
 XP_018958283.1 homeobox protein MSX-2-like isoform X1
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0043049P:otic placode formation
GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
Transcription Regulation
SRR941867_primary_scf7180002215333_1-1063
Len: 1,062 bp
Hits: 4
E-val: 2.30E-31
Sim: 97.39%
 XP_018935707.1 MRG/MORF4L-binding protein-like
GO:0006325P:chromatin organization
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0005634C:nucleus
GO:0035267C:NuA4 histone acetyltransferase complex
Transcription Regulation
SRR941867_primary_scf7180002229900_1-904
Len: 903 bp
Hits: 20
E-val: 5.00E-19
Sim: 78.68%
 XP_016111317.1 nuclear pore complex protein Nup85 isoform X1
GO:0006406P:mRNA export from nucleus
GO:0006606P:protein import into nucleus
GO:0045893P:positive regulation of DNA-templated transcription
GO:0017056F:structural constituent of nuclear pore
GO:0031080C:nuclear pore outer ring
GO:0031965C:nuclear membrane
Transcription Regulation
SRR941867_primary_scf7180002229985_1-1382
Len: 1,381 bp
Hits: 20
E-val: 4.40E-19
Sim: 92.12%
 XP_018918914.1 histone-lysine N-methyltransferase EHMT1-like
GO:0000122P:negative regulation of transcription by RNA polymerase II
GO:0006338P:chromatin remodeling
GO:0032259P:methylation
GO:0002039F:p53 binding
GO:0008270F:zinc ion binding
GO:0046974F:histone H3K9 methyltransferase activity
GO:0000785C:chromatin
GO:0005634C:nucleus
Transcription Regulation