Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002237296_1-651
Len: 650 bp
Hits: 14
E-val: 1.10E-07
Sim: 56%
|
XP_016128052.1 transcription factor IIIB 90 kDa subunit-like |
GO:0006352P:DNA-templated transcription initiation GO:0006383P:transcription by RNA polymerase III GO:0006413P:translational initiation GO:0030099P:myeloid cell differentiation GO:0030223P:neutrophil differentiation GO:0070897P:transcription preinitiation complex assembly GO:0000995F:RNA polymerase III general transcription initiation factor activity GO:0001006F:RNA polymerase III type 3 promoter sequence-specific DNA binding GO:0003743F:translation initiation factor activity GO:0008270F:zinc ion binding GO:0017025F:TBP-class protein binding GO:0000126C:transcription factor TFIIIB complex GO:0005634C:nucleus GO:0097550C:transcription preinitiation complex |
Transcription Regulation
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SRR941867_primary_scf7180002315527_632-1729
Len: 1,097 bp
Hits: 15
E-val: 5.50E-73
Sim: 66.9%
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XP_018963428.1 zinc finger protein 32-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002316180_492-2762
Len: 2,270 bp
Hits: 20
E-val: 5.10E-206
Sim: 63.77%
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XP_018920982.1 zinc finger and BTB domain-containing protein 37-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005488F:binding |
Transcription Regulation
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SRR941867_primary_scf7180002316503_1-2891
Len: 2,890 bp
Hits: 20
E-val: 9.60E-32
Sim: 77.91%
|
ROI15097.1General transcription factor IIF subunit 1 |
GO:0006367P:transcription initiation at RNA polymerase II promoter GO:0032968P:positive regulation of transcription elongation by RNA polymerase II GO:0001096F:TFIIF-class transcription factor complex binding GO:0003677F:DNA binding GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0005674C:transcription factor TFIIF complex |
Transcription Regulation
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SRR941867_primary_scf7180002316668_964-1419
Len: 455 bp
Hits: 20
E-val: 2.00E-77
Sim: 96.02%
|
XP_018963601.1 cbp/p300-interacting transactivator 1 |
GO:0031507P:heterochromatin formation GO:0045893P:positive regulation of DNA-templated transcription GO:0003713F:transcription coactivator activity GO:0031078F:histone H3K14 deacetylase activity, hydrolytic mechanism GO:0032129F:histone H3K9 deacetylase activity, hydrolytic mechanism GO:0034739F:histone H4K16 deacetylase activity, hydrolytic mechanism GO:0140937F:histone H4K12 deacetylase activity, hydrolytic mechanism GO:0160008F:protein decrotonylase activity GO:0180032F:histone H4K5 deacetylase activity, hydrolytic mechanism GO:0180033F:histone H4K8 deacetylase activity, hydrolytic mechanism GO:1990162F:histone H3K4 deacetylase activity, hydrolytic mechanism GO:0005634C:nucleus GO:0005694C:chromosome GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002317309_439-1569
Len: 1,130 bp
Hits: 20
E-val: 1.20E-136
Sim: 72.62%
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XP_018938723.1 transcription factor Sp5-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
Transcription Regulation
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SRR941867_primary_scf7180002317671_476-2050
Len: 1,574 bp
Hits: 20
E-val: 2.80E-275
Sim: 96.4%
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XP_016094378.1 zinc finger protein 148 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0015031P:protein transport GO:0030097P:hemopoiesis GO:2000786P:positive regulation of autophagosome assembly GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0032266F:phosphatidylinositol-3-phosphate binding GO:0005634C:nucleus GO:0005886C:plasma membrane GO:0031201C:SNARE complex GO:0031901C:early endosome membrane |
Transcription Regulation
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SRR941867_primary_scf7180002317812_1-1513
Len: 1,512 bp
Hits: 20
E-val: 3.80E-104
Sim: 95.92%
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XP_018963827.1 Krueppel-like factor 13 isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0031018P:endocrine pancreas development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
Transcription Regulation
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SRR941867_primary_scf7180002318163_1-2221
Len: 2,220 bp
Hits: 20
E-val: 4.30E-48
Sim: 55.24%
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XP_014031517.1 zinc finger protein 143-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006606P:protein import into nucleus GO:0045893P:positive regulation of DNA-templated transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0031267F:small GTPase binding GO:0000785C:chromatin GO:0005635C:nuclear envelope GO:0005667C:transcription regulator complex GO:0005829C:cytosol GO:0031519C:PcG protein complex |
Transcription Regulation
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SRR941867_primary_scf7180002318195_1-1329
Len: 1,328 bp
Hits: 20
E-val: 2.20E-23
Sim: 100%
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NP_956915.1poly(A) polymerase gamma |
GO:0006397P:mRNA processing GO:0006954P:inflammatory response GO:0007249P:canonical NF-kappaB signal transduction GO:0007399P:nervous system development GO:0009653P:anatomical structure morphogenesis GO:0031123P:RNA 3'-end processing GO:0033554P:cellular response to stress GO:0034097P:response to cytokine GO:0038061P:non-canonical NF-kappaB signal transduction GO:0045087P:innate immune response GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003723F:RNA binding GO:0005524F:ATP binding GO:1990817F:poly(A) RNA polymerase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0016020C:membrane |
Transcription Regulation
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SRR941867_primary_scf7180002319023_508-2297
Len: 1,789 bp
Hits: 20
E-val: 1.00E-47
Sim: 60.55%
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XP_018948207.1 peroxisome proliferator-activated receptor alpha-like isoform X2 |
GO:0006355P:regulation of DNA-templated transcription GO:0005488F:binding |
Transcription Regulation
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SRR941867_primary_scf7180002320633_1-1954
Len: 1,953 bp
Hits: 20
E-val: 7.40E-44
Sim: 74.66%
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XP_020360468.1zinc finger protein 335-like |
GO:0007420P:brain development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0050769P:positive regulation of neurogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002321561_1-854
Len: 853 bp
Hits: 20
E-val: 2.20E-29
Sim: 74.13%
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RXN09055.1TAF5-like RNA polymerase II p300 CBP-associated factor-associated factor 65 kDa subunit 5L |
GO:0006366P:transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0003713F:transcription coactivator activity GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0000124C:SAGA complex GO:0033276C:transcription factor TFTC complex |
Transcription Regulation
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SRR941867_primary_scf7180002323064_758-1626
Len: 868 bp
Hits: 20
E-val: 9.60E-28
Sim: 86.75%
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XP_018942343.1 LOW QUALITY PROTEIN: histone acetyltransferase KAT2A-like |
GO:0001819P:positive regulation of cytokine production GO:0007507P:heart development GO:0007616P:long-term memory GO:0018393P:internal peptidyl-lysine acetylation GO:0040029P:epigenetic regulation of gene expression GO:0045589P:regulation of regulatory T cell differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048167P:regulation of synaptic plasticity GO:0060173P:limb development GO:0060349P:bone morphogenesis GO:0061035P:regulation of cartilage development GO:0106227P:peptidyl-lysine glutarylation GO:1903010P:regulation of bone development GO:0003682F:chromatin binding GO:0003713F:transcription coactivator activity GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0106078F:histone succinyltransferase activity GO:0106229F:histone glutaryltransferase activity GO:0140908F:histone H3K122 acetyltransferase activity GO:0005634C:nucleus GO:0005813C:centrosome GO:0045252C:oxoglutarate dehydrogenase complex GO:0140672C:ATAC complex |
Transcription Regulation
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SRR941867_primary_scf7180002324056_1-1911
Len: 1,910 bp
Hits: 20
E-val: 2.60E-150
Sim: 98.56%
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XP_018922659.1 LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit BPTF-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0008270F:zinc ion binding GO:0016589C:NURF complex |
Transcription Regulation
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SRR941867_primary_scf7180002324322_1-1227
Len: 1,226 bp
Hits: 20
E-val: 2.00E-140
Sim: 67.08%
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RXN10233.1zinc finger 16-like protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding |
Transcription Regulation
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SRR941867_primary_scf7180002325113_1925-2515
Len: 590 bp
Hits: 20
E-val: 5.80E-101
Sim: 95.47%
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XP_018949241.1 achaete-scute homolog 1a-like |
GO:0002070P:epithelial cell maturation GO:0010629P:negative regulation of gene expression GO:0021575P:hindbrain morphogenesis GO:0021984P:adenohypophysis development GO:0031103P:axon regeneration GO:0043697P:cell dedifferentiation GO:0045666P:positive regulation of neuron differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048566P:embryonic digestive tract development GO:0050767P:regulation of neurogenesis GO:0060575P:intestinal epithelial cell differentiation GO:0061195P:taste bud formation GO:0061549P:sympathetic ganglion development GO:0070654P:sensory epithelium regeneration GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0090575C:RNA polymerase II transcription regulator complex |
Transcription Regulation
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SRR941867_primary_scf7180002326497_305-1414
Len: 1,109 bp
Hits: 20
E-val: 4.90E-210
Sim: 86.88%
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XP_018951197.1 forkhead box protein L1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0030154P:cell differentiation GO:0030500P:regulation of bone mineralization GO:0035138P:pectoral fin morphogenesis GO:0043010P:camera-type eye development GO:0045892P:negative regulation of DNA-templated transcription GO:0060536P:cartilage morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002326985_1-1914
Len: 1,913 bp
Hits: 20
E-val: 2.30E-13
Sim: 87.29%
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XP_026073320.1histone deacetylase 4-like isoform X4 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0006325P:chromatin organization GO:0031078F:histone H3K14 deacetylase activity, hydrolytic mechanism GO:0032129F:histone H3K9 deacetylase activity, hydrolytic mechanism GO:0034739F:histone H4K16 deacetylase activity, hydrolytic mechanism GO:0046872F:metal ion binding GO:0140937F:histone H4K12 deacetylase activity, hydrolytic mechanism GO:0180032F:histone H4K5 deacetylase activity, hydrolytic mechanism GO:0180033F:histone H4K8 deacetylase activity, hydrolytic mechanism GO:1990162F:histone H3K4 deacetylase activity, hydrolytic mechanism GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002328712_427-1716
Len: 1,289 bp
Hits: 20
E-val: 2.20E-238
Sim: 93.23%
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XP_018980360.1 zinc finger protein 516-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002329404_2004-2441
Len: 437 bp
Hits: 20
E-val: 1.60E-52
Sim: 94.14%
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XP_016416403.1 transcription factor Ovo-like 2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009913P:epidermal cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002329534_1137-1604
Len: 467 bp
Hits: 20
E-val: 1.60E-77
Sim: 75.93%
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XP_016324103.1 zinc finger BED domain-containing protein 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002329668_239-1147
Len: 908 bp
Hits: 20
E-val: 4.90E-168
Sim: 93.17%
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XP_018925673.1 leucine-rich repeat-containing protein 14B-like |
GO:0008284P:positive regulation of cell population proliferation GO:0043066P:negative regulation of apoptotic process GO:0045596P:negative regulation of cell differentiation GO:0045892P:negative regulation of DNA-templated transcription GO:0005509F:calcium ion binding GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002330106_1-1183
Len: 1,182 bp
Hits: 20
E-val: 7.00E-122
Sim: 89.6%
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XP_018973848.1 thyroid hormone receptor-associated protein 3-like isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003677F:DNA binding GO:0003712F:transcription coregulator activity GO:0016592C:mediator complex |
Transcription Regulation
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SRR941867_primary_scf7180002330564_1-1001
Len: 1,000 bp
Hits: 20
E-val: 2.00E-21
Sim: 96.72%
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NP_001018304.1inhibitor of growth protein 4 |
GO:0002244P:hematopoietic progenitor cell differentiation GO:0006325P:chromatin organization GO:0006355P:regulation of DNA-templated transcription GO:0016192P:vesicle-mediated transport GO:0043065P:positive regulation of apoptotic process GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005882C:intermediate filament GO:0012505C:endomembrane system GO:0016020C:membrane |
Transcription Regulation
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