Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002332311_1-1026
Len: 1,025 bp
Hits: 20
E-val: 2.30E-166
Sim: 97.06%
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XP_018938148.1 doublesex- and mab-3-related transcription factor 3a-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0046661P:male sex differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046872F:metal ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002332533_349-1272
Len: 923 bp
Hits: 20
E-val: 4.40E-23
Sim: 97.91%
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RXN05018.1mediator of RNA polymerase II transcription subunit 6 isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0003713F:transcription coactivator activity GO:0016592C:mediator complex GO:0070847C:core mediator complex |
Transcription Regulation
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SRR941867_primary_scf7180002332852_1-1258
Len: 1,257 bp
Hits: 20
E-val: 1.30E-25
Sim: 99.1%
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XP_016085415.1 PH-interacting protein-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007010P:cytoskeleton organization GO:0008360P:regulation of cell shape GO:0031492F:nucleosomal DNA binding GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002332864_1-1372
Len: 1,371 bp
Hits: 20
E-val: 6.10E-146
Sim: 84.41%
|
XP_018975277.1 zinc finger protein GLIS1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
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SRR941867_primary_scf7180002333586_214-1631
Len: 1,417 bp
Hits: 20
E-val: 1.00E-79
Sim: 97.04%
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XP_018976807.1 protein Jade-1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006915P:apoptotic process GO:0008270F:zinc ion binding GO:0000123C:histone acetyltransferase complex GO:0005634C:nucleus GO:0005856C:cytoskeleton GO:0042995C:cell projection |
Transcription Regulation
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SRR941867_primary_scf7180002333616_52-1629
Len: 1,577 bp
Hits: 20
E-val: 5.00E-35
Sim: 86.2%
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XP_018927829.1 PAX3- and PAX7-binding protein 1-like |
GO:0000398P:mRNA splicing, via spliceosome GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003677F:DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002334217_758-1453
Len: 695 bp
Hits: 20
E-val: 5.70E-124
Sim: 97.35%
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XP_018944765.1 homeobox protein SIX5-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
Transcription Regulation
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SRR941867_primary_scf7180002334255_1111-1671
Len: 560 bp
Hits: 20
E-val: 1.90E-45
Sim: 95.76%
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XP_018978435.1 LOW QUALITY PROTEIN: hepatocyte nuclear factor 1-alpha-like |
GO:0001889P:liver development GO:0003323P:type B pancreatic cell development GO:0006357P:regulation of transcription by RNA polymerase II GO:0030073P:insulin secretion GO:0045893P:positive regulation of DNA-templated transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002334443_1-1761
Len: 1,760 bp
Hits: 20
E-val: 4.10E-126
Sim: 84.39%
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XP_016416504.1 zinc finger and SCAN domain-containing protein 5A-like isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0000785C:chromatin GO:0005667C:transcription regulator complex GO:0031519C:PcG protein complex |
Transcription Regulation
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SRR941867_primary_scf7180002335164_603-1826
Len: 1,223 bp
Hits: 20
E-val: 5.80E-156
Sim: 83.01%
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XP_018953382.1 LOW QUALITY PROTEIN: myoneurin-like |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002335822_1074-1701
Len: 627 bp
Hits: 20
E-val: 9.90E-59
Sim: 90.65%
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XP_018966596.1 regulatory factor X-associated protein-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002336110_1-1813
Len: 1,812 bp
Hits: 20
E-val: 1.10E-22
Sim: 94.47%
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XP_026086681.1RNA polymerase II elongation factor ELL2-like isoform X2 |
GO:0006414P:translational elongation GO:0032968P:positive regulation of transcription elongation by RNA polymerase II GO:0042795P:snRNA transcription by RNA polymerase II GO:0000987F:cis-regulatory region sequence-specific DNA binding GO:0003746F:translation elongation factor activity GO:0008023C:transcription elongation factor complex |
Transcription Regulation
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SRR941867_primary_scf7180002336503_1-1414
Len: 1,413 bp
Hits: 20
E-val: 3.10E-116
Sim: 96.41%
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XP_018931334.1 forkhead box protein O1-A-like |
GO:0001945P:lymph vessel development GO:0006094P:gluconeogenesis GO:0006357P:regulation of transcription by RNA polymerase II GO:0048659P:smooth muscle cell proliferation GO:0048745P:smooth muscle tissue development GO:0051145P:smooth muscle cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002336812_1-1556
Len: 1,555 bp
Hits: 20
E-val: 1.60E-54
Sim: 99.61%
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XP_018941965.1 PR domain zinc finger protein 1-like, partial |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0045165P:cell fate commitment GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002338524_301-1417
Len: 1,116 bp
Hits: 20
E-val: 8.30E-24
Sim: 97.94%
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XP_016129289.1 RNA polymerase II elongation factor ELL-like |
GO:0006414P:translational elongation GO:0032968P:positive regulation of transcription elongation by RNA polymerase II GO:0042795P:snRNA transcription by RNA polymerase II GO:0000987F:cis-regulatory region sequence-specific DNA binding GO:0003746F:translation elongation factor activity GO:0008023C:transcription elongation factor complex |
Transcription Regulation
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SRR941867_primary_scf7180002341295_131-573
Len: 442 bp
Hits: 20
E-val: 6.20E-15
Sim: 86.54%
|
AAH66458.1Mta3 protein |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0060215P:primitive hemopoiesis GO:0003682F:chromatin binding GO:0003713F:transcription coactivator activity GO:0003714F:transcription corepressor activity GO:0008270F:zinc ion binding GO:0042826F:histone deacetylase binding GO:0043565F:sequence-specific DNA binding GO:0016581C:NuRD complex |
Transcription Regulation
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SRR941867_primary_scf7180002341552_471-1699
Len: 1,228 bp
Hits: 20
E-val: 7.90E-28
Sim: 100%
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ROL49138.1Pre-B-cell leukemia transcription factor 3 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002343102_1-467
Len: 466 bp
Hits: 20
E-val: 3.90E-20
Sim: 100%
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NP_001004596.1general transcription factor IIH subunit 1 |
GO:0006289P:nucleotide-excision repair GO:0006360P:transcription by RNA polymerase I GO:0006366P:transcription by RNA polymerase II GO:0006590P:thyroid hormone generation GO:0006979P:response to oxidative stress GO:0042446P:hormone biosynthetic process GO:0042744P:hydrogen peroxide catabolic process GO:0048066P:developmental pigmentation GO:0098869P:cellular oxidant detoxification GO:0004601F:peroxidase activity GO:0005509F:calcium ion binding GO:0016174F:NAD(P)H oxidase H2O2-forming activity GO:0020037F:heme binding GO:0000439C:transcription factor TFIIH core complex GO:0005675C:transcription factor TFIIH holo complex GO:0005737C:cytoplasm GO:0016020C:membrane |
Transcription Regulation
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SRR941867_primary_scf7180002345186_791-1042
Len: 251 bp
Hits: 20
E-val: 5.20E-35
Sim: 98.89%
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XP_026052925.1E3 ubiquitin-protein ligase UHRF1 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001889P:liver development GO:0002088P:lens development in camera-type eye GO:0006511P:ubiquitin-dependent protein catabolic process GO:0006954P:inflammatory response GO:0016567P:protein ubiquitination GO:0031100P:animal organ regeneration GO:0031507P:heterochromatin formation GO:0044027P:negative regulation of gene expression via chromosomal CpG island methylation GO:0060729P:intestinal epithelial structure maintenance GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0042393F:histone binding GO:0044729F:hemi-methylated DNA-binding GO:0061630F:ubiquitin protein ligase activity GO:0000791C:euchromatin GO:0000792C:heterochromatin GO:0005634C:nucleus GO:0005657C:replication fork GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002346057_1-1382
Len: 1,381 bp
Hits: 20
E-val: 2.80E-74
Sim: 89.14%
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XP_018976794.1 LOW QUALITY PROTEIN: forkhead box protein N3-like |
GO:0006355P:regulation of DNA-templated transcription GO:0000987F:cis-regulatory region sequence-specific DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002347536_270-1424
Len: 1,154 bp
Hits: 19
E-val: 1.70E-157
Sim: 60.76%
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XP_018934945.1 putative zinc finger and SCAN domain-containing protein 5D |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009913P:epidermal cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0010484F:histone H3 acetyltransferase activity GO:0010485F:histone H4 acetyltransferase activity GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002347614_1-1298
Len: 1,297 bp
Hits: 20
E-val: 3.60E-23
Sim: 89.01%
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XP_016406518.1 AT-rich interactive domain-containing protein 5B-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000976F:transcription cis-regulatory region binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002348126_1-1169
Len: 1,168 bp
Hits: 6
E-val: 1.20E-20
Sim: 86.34%
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XP_016328219.1 mediator of RNA polymerase II transcription subunit 12-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003712F:transcription coregulator activity GO:0003713F:transcription coactivator activity GO:0008013F:beta-catenin binding GO:0005634C:nucleus GO:0016592C:mediator complex |
Transcription Regulation
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SRR941867_primary_scf7180002352728_1-946
Len: 945 bp
Hits: 20
E-val: 3.50E-23
Sim: 57.31%
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XP_018928462.1 FK506-binding protein 15-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0140839F:RNA polymerase II CTD heptapeptide repeat P3 isomerase activity GO:0140840F:RNA polymerase II CTD heptapeptide repeat P6 isomerase activity GO:0030426C:growth cone |
Transcription Regulation
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SRR941867_primary_scf7180002353035_1-1166
Len: 1,165 bp
Hits: 20
E-val: 1.10E-18
Sim: 85.94%
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XP_018922592.1 histone-lysine N-methyltransferase ATX1-like |
GO:0006338P:chromatin remodeling GO:0032259P:methylation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003713F:transcription coactivator activity GO:0008270F:zinc ion binding GO:0140999F:histone H3K4 trimethyltransferase activity GO:0044666C:MLL3/4 complex |
Transcription Regulation
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