Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002354053_118-919
Len: 801 bp
Hits: 20
E-val: 6.10E-53
Sim: 74.2%
|
XP_018928821.1 ETS translocation variant 5-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007346P:regulation of mitotic cell cycle GO:0008045P:motor neuron axon guidance GO:0021979P:hypothalamus cell differentiation GO:0035108P:limb morphogenesis GO:0045893P:positive regulation of DNA-templated transcription GO:0048793P:pronephros development GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002355656_1-892
Len: 891 bp
Hits: 20
E-val: 1.20E-36
Sim: 67.64%
|
XP_018921142.1 cyclic AMP-dependent transcription factor ATF-7-like isoform X3 |
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity |
Transcription Regulation
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SRR941867_primary_scf7180002356133_1-513
Len: 512 bp
Hits: 20
E-val: 2.10E-30
Sim: 97.78%
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XP_026087597.1hepatic leukemia factor-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002356868_1-429
Len: 428 bp
Hits: 20
E-val: 1.50E-29
Sim: 88.73%
|
XP_026063602.1nucleosome-remodeling factor subunit BPTF-like isoform X9 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0008270F:zinc ion binding GO:0016589C:NURF complex |
Transcription Regulation
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SRR941867_primary_scf7180002356929_1-971
Len: 970 bp
Hits: 20
E-val: 1.50E-29
Sim: 89.64%
|
XP_018965640.1 probable helicase with zinc finger domain |
GO:0035194P:regulatory ncRNA-mediated post-transcriptional gene silencing GO:0003677F:DNA binding GO:0004386F:helicase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0016787F:hydrolase activity GO:0005829C:cytosol GO:0043186C:P granule |
Transcription Regulation
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SRR941867_primary_scf7180002357498_376-878
Len: 502 bp
Hits: 20
E-val: 1.60E-43
Sim: 97.56%
|
XP_018924347.1 AT-rich interactive domain-containing protein 3B-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003677F:DNA binding GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
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SRR941867_primary_scf7180002357985_2-764
Len: 762 bp
Hits: 20
E-val: 1.60E-26
Sim: 93.86%
|
XP_018948491.1 LOW QUALITY PROTEIN: zinc finger protein 827-like |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002358168_114-2076
Len: 1,962 bp
Hits: 20
E-val: 4.20E-47
Sim: 98.87%
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XP_016120235.1 transcription factor AP-2-alpha-like, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0042127P:regulation of cell population proliferation GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002358791_1132-1434
Len: 302 bp
Hits: 20
E-val: 6.90E-50
Sim: 90%
|
XP_018928188.1 forkhead box protein I1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009653P:anatomical structure morphogenesis GO:0009957P:epidermal cell fate specification GO:0062236P:ionocyte differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002359171_43-523
Len: 480 bp
Hits: 20
E-val: 6.90E-60
Sim: 74.21%
|
XP_018958275.1 homeobox protein MSX-2-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0043049P:otic placode formation GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002360140_383-1420
Len: 1,037 bp
Hits: 20
E-val: 5.70E-27
Sim: 95.07%
|
CAG03344.1unnamed protein product, partial |
GO:0006367P:transcription initiation at RNA polymerase II promoter GO:0006413P:translational initiation GO:0003743F:translation initiation factor activity GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0005669C:transcription factor TFIID complex |
Transcription Regulation
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SRR941867_primary_scf7180002361089_1-1155
Len: 1,154 bp
Hits: 20
E-val: 2.70E-46
Sim: 95.43%
|
XP_018950461.1 zinc finger protein 318-like |
GO:0045892P:negative regulation of DNA-templated transcription GO:0045893P:positive regulation of DNA-templated transcription GO:0003676F:nucleic acid binding GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002361482_1-877
Len: 876 bp
Hits: 20
E-val: 6.50E-32
Sim: 99.07%
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XP_016305899.1 myocyte-specific enhancer factor 2C-like |
GO:0003143P:embryonic heart tube morphogenesis GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0055013P:cardiac muscle cell development GO:0060914P:heart formation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0042826F:histone deacetylase binding GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002363332_1-868
Len: 867 bp
Hits: 20
E-val: 2.30E-13
Sim: 93.18%
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XP_018922933.1 amyloid beta A4 precursor protein-binding family B member 2-like isoform X1 |
GO:0006355P:regulation of DNA-templated transcription GO:0001540F:amyloid-beta binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002365404_342-1242
Len: 900 bp
Hits: 20
E-val: 9.60E-39
Sim: 98.86%
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XP_018924618.1 ETS homologous factor-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030154P:cell differentiation GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002367546_118-1349
Len: 1,231 bp
Hits: 20
E-val: 7.70E-15
Sim: 97.68%
|
XP_017159043.1 plexin domain-containing protein 2-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
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SRR941867_primary_scf7180002370144_1-858
Len: 857 bp
Hits: 20
E-val: 1.40E-34
Sim: 94.47%
|
XP_018976465.1 myelin transcription factor 1-like protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002370368_455-1058
Len: 603 bp
Hits: 20
E-val: 2.40E-30
Sim: 99.59%
|
RXM36991.1Transcription initiation factor IIB |
GO:0001174P:transcriptional start site selection at RNA polymerase II promoter GO:0006338P:chromatin remodeling GO:0006413P:translational initiation GO:0051123P:RNA polymerase II preinitiation complex assembly GO:1990114P:RNA polymerase II core complex assembly GO:0000979F:RNA polymerase II core promoter sequence-specific DNA binding GO:0003743F:translation initiation factor activity GO:0008270F:zinc ion binding GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0017025F:TBP-class protein binding GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0140908F:histone H3K122 acetyltransferase activity GO:0005634C:nucleus GO:0005694C:chromosome GO:0097550C:transcription preinitiation complex |
Transcription Regulation
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SRR941867_primary_scf7180002370409_57-1514
Len: 1,457 bp
Hits: 20
E-val: 4.50E-14
Sim: 95.13%
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XP_021329396.1calmodulin-binding transcription activator 1-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003690F:double-stranded DNA binding GO:0003712F:transcription coregulator activity GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
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SRR941867_primary_scf7180002371174_1-1176
Len: 1,175 bp
Hits: 20
E-val: 1.30E-24
Sim: 89.53%
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XP_018952603.1 plastin-3-like |
GO:0006355P:regulation of DNA-templated transcription GO:0008045P:motor neuron axon guidance GO:0030282P:bone mineralization GO:0039019P:pronephric nephron development GO:0048701P:embryonic cranial skeleton morphogenesis GO:0051017P:actin filament bundle assembly GO:0051639P:actin filament network formation GO:0072114P:pronephros morphogenesis GO:0003700F:DNA-binding transcription factor activity GO:0005509F:calcium ion binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0005884C:actin filament GO:0032432C:actin filament bundle |
Transcription Regulation
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SRR941867_primary_scf7180002371907_220-1074
Len: 854 bp
Hits: 20
E-val: 2.60E-94
Sim: 67.83%
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RXN33231.1LINE-1 type transposase domain-containing 1 |
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002372143_590-1613
Len: 1,023 bp
Hits: 20
E-val: 4.50E-16
Sim: 99.09%
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XP_017566381.1 peptidyl-prolyl cis-trans isomerase FKBP1A-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0140839F:RNA polymerase II CTD heptapeptide repeat P3 isomerase activity GO:0140840F:RNA polymerase II CTD heptapeptide repeat P6 isomerase activity GO:0033017C:sarcoplasmic reticulum membrane |
Transcription Regulation
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SRR941867_primary_scf7180002373518_1-1060
Len: 1,059 bp
Hits: 20
E-val: 2.00E-19
Sim: 85.43%
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XP_026112727.1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like |
GO:0001843P:neural tube closure GO:0007420P:brain development GO:0021999P:neural plate anterior/posterior regionalization GO:0030182P:neuron differentiation GO:0034728P:nucleosome organization GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0060319P:primitive erythrocyte differentiation GO:2000177P:regulation of neural precursor cell proliferation GO:0004386F:helicase activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0031491F:nucleosome binding GO:0036310F:ATP-dependent DNA/DNA annealing activity GO:0042393F:histone binding GO:0140750F:nucleosome array spacer activity GO:0005654C:nucleoplasm GO:0016589C:NURF complex GO:0090537C:CERF complex |
Transcription Regulation
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SRR941867_primary_scf7180002374721_498-1546
Len: 1,048 bp
Hits: 20
E-val: 1.60E-13
Sim: 79.35%
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XP_026084849.1cyclic AMP-responsive element-binding protein 5-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0035497F:cAMP response element binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002375246_1-387
Len: 386 bp
Hits: 20
E-val: 6.30E-24
Sim: 91.33%
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XP_018921933.1 RING1 and YY1-binding protein A isoform X1 |
GO:0006915P:apoptotic process GO:0045893P:positive regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003712F:transcription coregulator activity GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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