Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002376385_1-771
Len: 770 bp
Hits: 20
E-val: 5.50E-19
Sim: 96%
|
XP_026053266.1signal transducer and activator of transcription 1-alpha/beta-like isoform X2 |
GO:0006355P:regulation of DNA-templated transcription GO:0007165P:signal transduction GO:0009653P:anatomical structure morphogenesis GO:0060429P:epithelium development GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002376711_342-736
Len: 394 bp
Hits: 20
E-val: 1.10E-18
Sim: 97.63%
|
ROL46982.1Myelin transcription factor 1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0030154P:cell differentiation GO:1904888P:cranial skeletal system development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002378891_381-1307
Len: 926 bp
Hits: 20
E-val: 8.60E-144
Sim: 77.68%
|
XP_018927448.1 zinc finger protein 84-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0032259P:methylation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008168F:methyltransferase activity GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
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SRR941867_primary_scf7180002381764_334-732
Len: 398 bp
Hits: 20
E-val: 1.60E-67
Sim: 90.08%
|
XP_018961443.1 protein atonal homolog 7-like isoform X1 |
GO:0007346P:regulation of mitotic cell cycle GO:0010842P:retina layer formation GO:0036269P:swimming behavior GO:0043473P:pigmentation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048663P:neuron fate commitment GO:0050769P:positive regulation of neurogenesis GO:1902336P:positive regulation of retinal ganglion cell axon guidance GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0070888F:E-box binding GO:0005634C:nucleus GO:0030424C:axon GO:0043204C:perikaryon |
Transcription Regulation
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SRR941867_primary_scf7180002383879_1-520
Len: 519 bp
Hits: 20
E-val: 5.50E-31
Sim: 97.47%
|
XP_018945313.1 hepatic leukemia factor-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002386314_1-791
Len: 790 bp
Hits: 20
E-val: 1.00E-28
Sim: 91.07%
|
XP_016403284.1 peptidyl-prolyl cis-trans isomerase FKBP10-like, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006457P:protein folding GO:0005509F:calcium ion binding GO:0140839F:RNA polymerase II CTD heptapeptide repeat P3 isomerase activity GO:0140840F:RNA polymerase II CTD heptapeptide repeat P6 isomerase activity GO:0005783C:endoplasmic reticulum |
Transcription Regulation
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SRR941867_primary_scf7180002394713_395-1177
Len: 782 bp
Hits: 20
E-val: 1.40E-38
Sim: 74.79%
|
XP_016371681.1 LIM homeobox transcription factor 1-beta-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030182P:neuron differentiation GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002402755_1-1358
Len: 1,357 bp
Hits: 20
E-val: 1.20E-16
Sim: 100%
|
XP_009304761.1mediator of RNA polymerase II transcription subunit 24 isoform X1 |
GO:0046549P:retinal cone cell development GO:0048484P:enteric nervous system development GO:0048538P:thymus development GO:0060261P:positive regulation of transcription initiation by RNA polymerase II GO:0061453P:interstitial cell of Cajal differentiation GO:0003712F:transcription coregulator activity GO:0016592C:mediator complex |
Transcription Regulation
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SRR941867_primary_scf7180002404489_1-1033
Len: 1,032 bp
Hits: 20
E-val: 7.10E-54
Sim: 95.79%
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XP_018978708.1 transcription initiation factor TFIID subunit 5 isoform X1 |
GO:0006367P:transcription initiation at RNA polymerase II promoter GO:0006413P:translational initiation GO:0003743F:translation initiation factor activity GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0000124C:SAGA complex GO:0005669C:transcription factor TFIID complex |
Transcription Regulation
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SRR941867_primary_scf7180002409026_1-1141
Len: 1,140 bp
Hits: 20
E-val: 1.80E-21
Sim: 95.56%
|
ROL44216.1Homeobox protein meis3, partial |
GO:0001525P:angiogenesis GO:0001654P:eye development GO:0006508P:proteolysis GO:0008284P:positive regulation of cell population proliferation GO:0009880P:embryonic pattern specification GO:0009887P:animal organ morphogenesis GO:0030097P:hemopoiesis GO:0030902P:hindbrain development GO:0031017P:exocrine pancreas development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048484P:enteric nervous system development GO:1901166P:neural crest cell migration involved in autonomic nervous system development GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005515F:protein binding GO:0008239F:dipeptidyl-peptidase activity GO:0043565F:sequence-specific DNA binding GO:0070008F:serine-type exopeptidase activity GO:0005634C:nucleus GO:0005764C:lysosome GO:0005768C:endosome |
Transcription Regulation
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SRR941867_primary_scf7180002413233_281-1147
Len: 866 bp
Hits: 20
E-val: 8.10E-35
Sim: 98.38%
|
XP_018927287.1 paired box protein Pax-7-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0009653P:anatomical structure morphogenesis GO:0042060P:wound healing GO:0050938P:regulation of xanthophore differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002414082_1-826
Len: 825 bp
Hits: 20
E-val: 4.30E-62
Sim: 91.67%
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XP_018944511.1 zinc finger E-box-binding homeobox 1-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002417341_1-693
Len: 692 bp
Hits: 20
E-val: 2.10E-22
Sim: 84.01%
|
XP_016337382.1 DNA (cytosine-5)-methyltransferase 3A-like isoform X1 |
GO:0032259P:methylation GO:0045892P:negative regulation of DNA-templated transcription GO:0008270F:zinc ion binding GO:0051719F:DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates GO:0051720F:DNA (cytosine-5-)-methyltransferase activity, acting on CpNpG substrates GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002417648_1-1251
Len: 1,250 bp
Hits: 20
E-val: 2.10E-129
Sim: 94.09%
|
XP_018963518.1 ETS domain-containing protein Elk-4-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030154P:cell differentiation GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002419977_1-1215
Len: 1,214 bp
Hits: 20
E-val: 3.90E-27
Sim: 74.74%
|
XP_016148297.1 metastasis-associated protein MTA1-like, partial |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0006302P:double-strand break repair GO:0010212P:response to ionizing radiation GO:0003713F:transcription coactivator activity GO:0003714F:transcription corepressor activity GO:0042826F:histone deacetylase binding GO:0016581C:NuRD complex |
Transcription Regulation
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SRR941867_primary_scf7180002424766_1-520
Len: 519 bp
Hits: 20
E-val: 1.20E-14
Sim: 89.8%
|
XP_018927279.1 patched domain-containing protein 1-like |
GO:0006508P:proteolysis GO:0045892P:negative regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0004181F:metallocarboxypeptidase activity GO:0008270F:zinc ion binding GO:0005829C:cytosol |
Transcription Regulation
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SRR941867_primary_scf7180002430183_1-1282
Len: 1,281 bp
Hits: 20
E-val: 2.50E-32
Sim: 66.05%
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XP_016099023.1 E3 ubiquitin-protein ligase ZFP91-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003712F:transcription coregulator activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002437671_1-1081
Len: 1,080 bp
Hits: 20
E-val: 1.70E-50
Sim: 66.14%
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XP_026123713.1paired amphipathic helix protein Sin3a-like isoform X1 |
GO:0007507P:heart development GO:0045892P:negative regulation of DNA-templated transcription GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002448430_1-297
Len: 296 bp
Hits: 20
E-val: 8.30E-24
Sim: 100%
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XP_018929327.1 LOW QUALITY PROTEIN: transformation/transcription domain-associated protein-like |
GO:0001964P:startle response GO:0006281P:DNA repair GO:0006355P:regulation of DNA-templated transcription GO:0035675P:neuromast hair cell development GO:0042481P:regulation of odontogenesis GO:0060536P:cartilage morphogenesis GO:0140861P:DNA repair-dependent chromatin remodeling GO:0000124C:SAGA complex GO:0005634C:nucleus GO:0035267C:NuA4 histone acetyltransferase complex |
Transcription Regulation
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SRR941867_primary_scf7180002454663_1-1101
Len: 1,100 bp
Hits: 20
E-val: 5.60E-33
Sim: 97.93%
|
XP_026118414.1paired mesoderm homeobox protein 1-like |
GO:0001837P:epithelial to mesenchymal transition GO:0001947P:heart looping GO:0006357P:regulation of transcription by RNA polymerase II GO:0086014P:atrial cardiac muscle cell action potential GO:1904888P:cranial skeletal system development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
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SRR941867_primary_scf7180002667064_1-1623
Len: 1,622 bp
Hits: 20
E-val: 9.50E-154
Sim: 88.87%
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XP_018944944.1 poly [ADP-ribose] polymerase 14-like |
GO:0010629P:negative regulation of gene expression GO:0045892P:negative regulation of DNA-templated transcription GO:0070212P:protein poly-ADP-ribosylation GO:0003714F:transcription corepressor activity GO:0003950F:NAD+ poly-ADP-ribosyltransferase activity GO:0016779F:nucleotidyltransferase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002667142_1-1618
Len: 1,617 bp
Hits: 20
E-val: 7.30E-21
Sim: 80.04%
|
CAG11131.1unnamed protein product |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000976F:transcription cis-regulatory region binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002668632_1-912
Len: 911 bp
Hits: 20
E-val: 2.50E-26
Sim: 97.02%
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RXN20265.1general transcription factor IIH subunit 4 |
GO:0006289P:nucleotide-excision repair GO:0006351P:DNA-templated transcription GO:0035556P:intracellular signal transduction GO:0001671F:ATPase activator activity GO:0003690F:double-stranded DNA binding GO:0003899F:DNA-directed RNA polymerase activity GO:0005085F:guanyl-nucleotide exchange factor activity GO:0008270F:zinc ion binding GO:0017124F:SH3 domain binding GO:0000439C:transcription factor TFIIH core complex GO:0005675C:transcription factor TFIIH holo complex GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002668682_1-1101
Len: 1,100 bp
Hits: 20
E-val: 9.90E-38
Sim: 97.8%
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NP_001017754.1cytosolic carboxypeptidase 6 |
GO:0006508P:proteolysis GO:0045892P:negative regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0004181F:metallocarboxypeptidase activity GO:0008270F:zinc ion binding GO:0005829C:cytosol |
Transcription Regulation
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SRR941867_primary_scf7180002688854_332-886
Len: 554 bp
Hits: 20
E-val: 2.90E-78
Sim: 65.69%
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XP_018932796.1 myocardin-like |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051145P:smooth muscle cell differentiation GO:0055007P:cardiac muscle cell differentiation GO:0003713F:transcription coactivator activity GO:0005634C:nucleus |
Transcription Regulation
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