Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180001897560_2225-6462
Len: 4,237 bp
Hits: 20
E-val: 0
Sim: 88.1%
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XP_016091778.1 teashirt homolog 3-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001897633_484-4933
Len: 4,449 bp
Hits: 20
E-val: 0
Sim: 96.11%
|
XP_018981133.1 AT-rich interactive domain-containing protein 1B-like isoform X1 |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0031491F:nucleosome binding GO:0005654C:nucleoplasm GO:0016514C:SWI/SNF complex GO:0035060C:brahma complex GO:0071565C:nBAF complex |
Transcription Regulation
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SRR953582_primary_scf7180001897687_1-4550
Len: 4,549 bp
Hits: 20
E-val: 0
Sim: 83.27%
|
XP_018980507.1 LOW QUALITY PROTEIN: histone-lysine N-methyltransferase ASH1L-like |
GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0032259P:methylation GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0008270F:zinc ion binding GO:0042800F:histone H3K4 methyltransferase activity GO:0005654C:nucleoplasm GO:0005694C:chromosome |
Transcription Regulation
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SRR953582_primary_scf7180001898150_2112-4212
Len: 2,100 bp
Hits: 20
E-val: 0
Sim: 90.56%
|
XP_018936798.1 LOW QUALITY PROTEIN: human immunodeficiency virus type I enhancer-binding protein 2 homolog |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001898170_97-4088
Len: 3,991 bp
Hits: 20
E-val: 0
Sim: 89.56%
|
XP_018977712.1 teashirt homolog 3-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001898402_2242-3822
Len: 1,580 bp
Hits: 20
E-val: 5.00E-293
Sim: 93.27%
|
XP_018974618.1 zinc finger and BTB domain-containing protein 20 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
Transcription Regulation
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SRR953582_primary_scf7180001898513_1089-3614
Len: 2,525 bp
Hits: 20
E-val: 0
Sim: 96.93%
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XP_018961095.1 volume-regulated anion channel subunit LRRC8D-like |
GO:0006397P:mRNA processing GO:0008380P:RNA splicing GO:0015810P:aspartate transmembrane transport GO:0032784P:regulation of DNA-templated transcription elongation GO:0035556P:intracellular signal transduction GO:0098656P:monoatomic anion transmembrane transport GO:0003677F:DNA binding GO:0005225F:volume-sensitive anion channel activity GO:0008270F:zinc ion binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0031981C:nuclear lumen GO:0034702C:monoatomic ion channel complex GO:0044609C:DBIRD complex |
Transcription Regulation
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SRR953582_primary_scf7180001898715_1-4854
Len: 4,853 bp
Hits: 20
E-val: 6.40E-105
Sim: 92.62%
|
XP_018961597.1 transcription initiation factor TFIID subunit 4 isoform X1 |
GO:0006355P:regulation of DNA-templated transcription GO:0006367P:transcription initiation at RNA polymerase II promoter GO:0006413P:translational initiation GO:0003677F:DNA binding GO:0003743F:translation initiation factor activity GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0046982F:protein heterodimerization activity GO:0005669C:transcription factor TFIID complex |
Transcription Regulation
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SRR953582_primary_scf7180001899606_661-2736
Len: 2,075 bp
Hits: 20
E-val: 0
Sim: 90.72%
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XP_018962809.1 zinc finger protein 536-like |
GO:0030903P:notochord development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005085F:guanyl-nucleotide exchange factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001899718_2736-3116
Len: 380 bp
Hits: 20
E-val: 4.70E-48
Sim: 92.57%
|
XP_018926938.1 GA-binding protein subunit beta-1-like |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000976F:transcription cis-regulatory region binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001899758_1-2278
Len: 2,277 bp
Hits: 20
E-val: 3.20E-14
Sim: 93.87%
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XP_026095915.1nuclear factor 1 X-type-like isoform X7 |
GO:0006260P:DNA replication GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001899783_1474-3053
Len: 1,579 bp
Hits: 20
E-val: 8.40E-107
Sim: 98.92%
|
XP_018958113.1 homeobox protein SIX6-like |
GO:0003407P:neural retina development GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
Transcription Regulation
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SRR953582_primary_scf7180001899802_1-3013
Len: 3,012 bp
Hits: 20
E-val: 8.50E-23
Sim: 100%
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XP_026082432.1homeobox protein MOX-2-like |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0061053P:somite development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001900020_1078-2196
Len: 1,118 bp
Hits: 20
E-val: 5.80E-195
Sim: 96.63%
|
XP_018924501.1 forkhead box protein D3 isoform X1 |
GO:0001755P:neural crest cell migration GO:0006357P:regulation of transcription by RNA polymerase II GO:0006488P:dolichol-linked oligosaccharide biosynthetic process GO:0007422P:peripheral nervous system development GO:0010629P:negative regulation of gene expression GO:0030318P:melanocyte differentiation GO:0045892P:negative regulation of DNA-templated transcription GO:0048484P:enteric nervous system development GO:0048485P:sympathetic nervous system development GO:0048937P:lateral line nerve glial cell development GO:0050935P:iridophore differentiation GO:0060351P:cartilage development involved in endochondral bone morphogenesis GO:0097066P:response to thyroid hormone GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0042281F:dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity GO:0005634C:nucleus GO:0005789C:endoplasmic reticulum membrane |
Transcription Regulation
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SRR953582_primary_scf7180001900230_2162-2764
Len: 602 bp
Hits: 20
E-val: 1.90E-83
Sim: 97.36%
|
XP_018971051.1 coiled-coil domain-containing protein 85B |
GO:0001843P:neural tube closure GO:0045892P:negative regulation of DNA-templated transcription GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0005912C:adherens junction |
Transcription Regulation
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SRR953582_primary_scf7180001900669_508-826
Len: 318 bp
Hits: 20
E-val: 3.80E-14
Sim: 97.26%
|
XP_026137356.1RNA polymerase II-associated factor 1 homolog |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0006368P:transcription elongation by RNA polymerase II GO:0007507P:heart development GO:0014032P:neural crest cell development GO:0000993F:RNA polymerase II complex binding GO:0003682F:chromatin binding GO:0016593C:Cdc73/Paf1 complex |
Transcription Regulation
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SRR953582_primary_scf7180001903251_1-6801
Len: 6,800 bp
Hits: 20
E-val: 6.40E-18
Sim: 92.36%
|
XP_018929820.1 LOW QUALITY PROTEIN: transcription factor 4, partial |
GO:0002088P:lens development in camera-type eye GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0000785C:chromatin GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
Transcription Regulation
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SRR953582_primary_scf7180001903350_952-4585
Len: 3,633 bp
Hits: 20
E-val: 1.40E-136
Sim: 93.82%
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XP_018965552.1 sterile alpha motif domain-containing protein 11-like |
GO:0045892P:negative regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0042393F:histone binding GO:0046872F:metal ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001903563_4725-8420
Len: 3,695 bp
Hits: 20
E-val: 0
Sim: 95.64%
|
XP_018957626.1 zinc finger and BTB domain-containing protein 38-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001903594_1-5856
Len: 5,855 bp
Hits: 20
E-val: 1.20E-121
Sim: 51.08%
|
XP_026063313.1delphilin-like isoform X1 |
GO:0006355P:regulation of DNA-templated transcription GO:0004866F:endopeptidase inhibitor activity GO:0005576C:extracellular region GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001903645_1-4307
Len: 4,306 bp
Hits: 20
E-val: 1.60E-19
Sim: 98.08%
|
CDQ92123.1unnamed protein product, partial |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0006887P:exocytosis GO:0032611P:interleukin-1 beta production GO:0032922P:circadian regulation of gene expression GO:0043153P:entrainment of circadian clock by photoperiod GO:0000976F:transcription cis-regulatory region binding GO:0001222F:transcription corepressor binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0012505C:endomembrane system GO:0031982C:vesicle GO:0032154C:cleavage furrow |
Transcription Regulation
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SRR953582_primary_scf7180001903789_521-6158
Len: 5,637 bp
Hits: 20
E-val: 0
Sim: 66.94%
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XP_016343674.1 DNA-binding protein RFX7-like |
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity |
Transcription Regulation
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SRR953582_primary_scf7180001903852_4370-5116
Len: 746 bp
Hits: 20
E-val: 3.40E-106
Sim: 91.43%
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XP_018973873.1 cbp/p300-interacting transactivator 3-like |
GO:0042692P:muscle cell differentiation GO:0045893P:positive regulation of DNA-templated transcription GO:0003713F:transcription coactivator activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001903873_1-4926
Len: 4,925 bp
Hits: 20
E-val: 0
Sim: 86.8%
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XP_016321894.1 zinc finger protein 865-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001903974_809-4394
Len: 3,585 bp
Hits: 20
E-val: 1.20E-28
Sim: 93.18%
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XP_016424212.1 probable helicase with zinc finger domain, partial |
GO:0006355P:regulation of DNA-templated transcription GO:0035194P:regulatory ncRNA-mediated post-transcriptional gene silencing GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0003723F:RNA binding GO:0004386F:helicase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0016787F:hydrolase activity GO:0005634C:nucleus GO:0005829C:cytosol GO:0043186C:P granule |
Transcription Regulation
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