Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180001943732_1-2329
Len: 2,328 bp
Hits: 20
E-val: 3.70E-26
Sim: 95.59%
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XP_016119166.1 homeobox protein MOX-1-like |
GO:0001501P:skeletal system development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048066P:developmental pigmentation GO:0055001P:muscle cell development GO:0060218P:hematopoietic stem cell differentiation GO:0061056P:sclerotome development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003682F:chromatin binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR953582_primary_scf7180001943796_1-4313
Len: 4,312 bp
Hits: 20
E-val: 3.70E-80
Sim: 60.97%
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XP_018982054.1 SAFB-like transcription modulator |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0050684P:regulation of mRNA processing GO:0003723F:RNA binding GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001943857_785-4434
Len: 3,649 bp
Hits: 20
E-val: 3.70E-20
Sim: 97%
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XP_016133545.1 poly(rC)-binding protein 3-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0048025P:negative regulation of mRNA splicing, via spliceosome GO:0003729F:mRNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR953582_primary_scf7180001943875_1744-3617
Len: 1,873 bp
Hits: 20
E-val: 5.60E-41
Sim: 68.79%
|
XP_026146788.1protein max isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0046983F:protein dimerization activity GO:0090575C:RNA polymerase II transcription regulator complex |
Transcription Regulation
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SRR953582_primary_scf7180001943921_2159-3193
Len: 1,034 bp
Hits: 20
E-val: 6.70E-153
Sim: 94.8%
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XP_018981615.1 LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B-like |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0031491F:nucleosome binding GO:0005654C:nucleoplasm GO:0016514C:SWI/SNF complex GO:0035060C:brahma complex GO:0071565C:nBAF complex |
Transcription Regulation
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SRR953582_primary_scf7180001943922_1963-4179
Len: 2,216 bp
Hits: 20
E-val: 8.00E-196
Sim: 62.89%
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XP_018920982.1 zinc finger and BTB domain-containing protein 37-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005488F:binding |
Transcription Regulation
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SRR953582_primary_scf7180001944063_130-3630
Len: 3,500 bp
Hits: 20
E-val: 5.40E-21
Sim: 99.41%
|
XP_026117403.1forkhead box protein P1-B isoform X4 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001944903_418-2916
Len: 2,498 bp
Hits: 20
E-val: 3.70E-80
Sim: 83.72%
|
XP_026116390.1zinc finger protein 827-like isoform X2 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001945060_2110-3043
Len: 933 bp
Hits: 20
E-val: 2.00E-15
Sim: 100%
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XP_026135944.1storkhead-box protein 2-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR953582_primary_scf7180001945088_1514-3595
Len: 2,081 bp
Hits: 20
E-val: 6.30E-227
Sim: 65.52%
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XP_016299444.1 transcriptional adapter 2-beta isoform X1 |
GO:0006355P:regulation of DNA-templated transcription GO:0005488F:binding GO:0043229C:intracellular organelle |
Transcription Regulation
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SRR953582_primary_scf7180001945192_1-1164
Len: 1,163 bp
Hits: 20
E-val: 5.60E-23
Sim: 98.63%
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XP_026077005.1lysine-specific demethylase 5B-like |
GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0032259P:methylation GO:0003677F:DNA binding GO:0008168F:methyltransferase activity GO:0008270F:zinc ion binding GO:0034647F:histone H3K4me/H3K4me2/H3K4me3 demethylase activity GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001945327_1-305
Len: 304 bp
Hits: 20
E-val: 2.20E-48
Sim: 94.62%
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XP_018981790.1 forkhead box protein Q1-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009653P:anatomical structure morphogenesis GO:0030154P:cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001945826_1016-2493
Len: 1,477 bp
Hits: 20
E-val: 2.40E-23
Sim: 100%
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NP_956915.1poly(A) polymerase gamma |
GO:0006397P:mRNA processing GO:0006954P:inflammatory response GO:0007249P:canonical NF-kappaB signal transduction GO:0007399P:nervous system development GO:0009653P:anatomical structure morphogenesis GO:0031123P:RNA 3'-end processing GO:0033554P:cellular response to stress GO:0034097P:response to cytokine GO:0038061P:non-canonical NF-kappaB signal transduction GO:0045087P:innate immune response GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003723F:RNA binding GO:0005524F:ATP binding GO:1990817F:poly(A) RNA polymerase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0016020C:membrane |
Transcription Regulation
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SRR953582_primary_scf7180001945913_1-3582
Len: 3,581 bp
Hits: 20
E-val: 2.40E-77
Sim: 65.85%
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XP_018968371.1 mediator of RNA polymerase II transcription subunit 13-like, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003712F:transcription coregulator activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001946231_537-3276
Len: 2,739 bp
Hits: 20
E-val: 1.30E-291
Sim: 67.31%
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XP_018954946.1 LOW QUALITY PROTEIN: zinc finger protein 703-like |
GO:0007368P:determination of left/right symmetry GO:0030902P:hindbrain development GO:0045892P:negative regulation of DNA-templated transcription GO:0048596P:embryonic camera-type eye morphogenesis GO:0060271P:cilium assembly GO:0008270F:zinc ion binding GO:0042826F:histone deacetylase binding GO:0000118C:histone deacetylase complex GO:0005737C:cytoplasm |
Transcription Regulation
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SRR953582_primary_scf7180001946256_1045-2666
Len: 1,621 bp
Hits: 20
E-val: 1.30E-65
Sim: 79.44%
|
CDQ89983.1unnamed protein product |
GO:0006406P:mRNA export from nucleus GO:0000445C:THO complex part of transcription export complex |
Transcription Regulation
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SRR953582_primary_scf7180001946276_458-2536
Len: 2,078 bp
Hits: 20
E-val: 8.50E-131
Sim: 95.81%
|
XP_018927735.1 inhibitor of growth protein 1-like isoform X1 |
GO:0006325P:chromatin organization GO:0045893P:positive regulation of DNA-templated transcription GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001946368_857-1684
Len: 827 bp
Hits: 20
E-val: 2.40E-84
Sim: 60.45%
|
RXN17961.1putative transposase element L1Md-A101/L1Md-A102/L1Md-A2 |
GO:0006044P:N-acetylglucosamine metabolic process GO:0006357P:regulation of transcription by RNA polymerase II GO:0006790P:sulfur compound metabolic process GO:0001517F:N-acetylglucosamine 6-O-sulfotransferase activity GO:0008146F:sulfotransferase activity GO:0016740F:transferase activity GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001946514_1-1325
Len: 1,324 bp
Hits: 20
E-val: 2.30E-20
Sim: 99.84%
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CDQ97632.1unnamed protein product |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0032332P:positive regulation of chondrocyte differentiation GO:0045165P:cell fate commitment GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001946612_1-3354
Len: 3,353 bp
Hits: 20
E-val: 5.90E-33
Sim: 97.66%
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XP_016367662.1 zinc finger protein AEBP2-like isoform X1 |
GO:0006325P:chromatin organization GO:0006357P:regulation of transcription by RNA polymerase II GO:0008270F:zinc ion binding GO:0035098C:ESC/E(Z) complex |
Transcription Regulation
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SRR953582_primary_scf7180001946889_1-2656
Len: 2,655 bp
Hits: 20
E-val: 3.70E-38
Sim: 98.51%
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NP_001038383.2zinc finger protein 704 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001947110_1-2286
Len: 2,285 bp
Hits: 20
E-val: 3.00E-44
Sim: 74.15%
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XP_016146043.1 host cell factor 1-like isoform X1 |
GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0007420P:brain development GO:0003713F:transcription coactivator activity GO:0035097C:histone methyltransferase complex |
Transcription Regulation
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SRR953582_primary_scf7180001947210_1-2462
Len: 2,461 bp
Hits: 20
E-val: 1.10E-60
Sim: 67.58%
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XP_026125140.1DNA methyltransferase 1-associated protein 1-like |
GO:0045892P:negative regulation of DNA-templated transcription GO:0060041P:retina development in camera-type eye GO:0000785C:chromatin GO:0005634C:nucleus GO:1902494C:catalytic complex |
Transcription Regulation
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SRR953582_primary_scf7180001947220_1147-2275
Len: 1,128 bp
Hits: 20
E-val: 4.00E-26
Sim: 93.95%
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RXN04749.1pituitary homeobox 1 isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009653P:anatomical structure morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001947374_112-1140
Len: 1,028 bp
Hits: 20
E-val: 9.80E-189
Sim: 87.09%
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XP_018962809.1 zinc finger protein 536-like |
GO:0030903P:notochord development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005085F:guanyl-nucleotide exchange factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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