Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180001956801_1-2409
Len: 2,408 bp
Hits: 20
E-val: 4.70E-32
Sim: 96.7%
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XP_026064469.1trinucleotide repeat-containing gene 6A protein-like |
GO:0006417P:regulation of translation GO:0035195P:miRNA-mediated post-transcriptional gene silencing GO:0060213P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening GO:0003723F:RNA binding GO:0000932C:P-body GO:0005654C:nucleoplasm GO:0005829C:cytosol |
Transcription Regulation
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SRR953582_primary_scf7180001956884_1-1610
Len: 1,609 bp
Hits: 20
E-val: 1.00E-75
Sim: 96.98%
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XP_026118400.1E3 SUMO-protein ligase PIAS1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0016925P:protein sumoylation GO:0003712F:transcription coregulator activity GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0061665F:SUMO ligase activity GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001957159_472-2188
Len: 1,716 bp
Hits: 20
E-val: 9.60E-80
Sim: 75.34%
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XP_018941243.1 diencephalon/mesencephalon homeobox protein 1-A-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007346P:regulation of mitotic cell cycle GO:0030901P:midbrain development GO:0045892P:negative regulation of DNA-templated transcription GO:0050767P:regulation of neurogenesis GO:0061074P:regulation of neural retina development GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001957550_1-2918
Len: 2,917 bp
Hits: 20
E-val: 8.50E-36
Sim: 88.06%
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XP_026053783.1structural maintenance of chromosomes protein 3 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007064P:mitotic sister chromatid cohesion GO:0031101P:fin regeneration GO:0051301P:cell division GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003690F:double-stranded DNA binding GO:0003723F:RNA binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0005634C:nucleus GO:0030892C:mitotic cohesin complex |
Transcription Regulation
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SRR953582_primary_scf7180001957785_918-2333
Len: 1,415 bp
Hits: 20
E-val: 2.40E-44
Sim: 71.46%
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XP_018979399.1 zinc finger protein 362-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003700F:DNA-binding transcription factor activity |
Transcription Regulation
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SRR953582_primary_scf7180001958064_975-1421
Len: 446 bp
Hits: 20
E-val: 1.30E-25
Sim: 90.85%
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XP_016384466.1 LOW QUALITY PROTEIN: RNA helicase Mov10l1 |
GO:0035194P:regulatory ncRNA-mediated post-transcriptional gene silencing GO:0003723F:RNA binding GO:0004386F:helicase activity GO:0005829C:cytosol GO:0043186C:P granule |
Transcription Regulation
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SRR953582_primary_scf7180001958221_1-1379
Len: 1,378 bp
Hits: 20
E-val: 6.50E-55
Sim: 95.62%
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XP_018979735.1 bromodomain-containing protein 2-like |
GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001958429_1-1791
Len: 1,790 bp
Hits: 20
E-val: 6.90E-97
Sim: 72.6%
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XP_018971750.1 transducin-like enhancer protein 1 |
GO:0006355P:regulation of DNA-templated transcription GO:0048523P:negative regulation of cellular process |
Transcription Regulation
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SRR953582_primary_scf7180001958949_1-1658
Len: 1,657 bp
Hits: 20
E-val: 2.00E-21
Sim: 97.57%
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XP_018967030.1 forkhead box protein P1-B-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001959505_1-1294
Len: 1,293 bp
Hits: 20
E-val: 3.70E-177
Sim: 93.46%
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XP_018924844.1 transcription factor Sox-7-like |
GO:0001570P:vasculogenesis GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0060840P:artery development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001959568_1-2621
Len: 2,620 bp
Hits: 20
E-val: 7.10E-26
Sim: 96.83%
|
AAQ18516.1transcription factor Sox5 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0032332P:positive regulation of chondrocyte differentiation GO:0045165P:cell fate commitment GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001960204_1-1863
Len: 1,862 bp
Hits: 20
E-val: 4.10E-60
Sim: 69.53%
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XP_016128345.1 histone-lysine N-methyltransferase 2B-like |
GO:0045893P:positive regulation of DNA-templated transcription GO:0042800F:histone H3K4 methyltransferase activity GO:0035097C:histone methyltransferase complex |
Transcription Regulation
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SRR953582_primary_scf7180001960520_463-1414
Len: 951 bp
Hits: 20
E-val: 1.50E-37
Sim: 72.99%
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XP_016131051.1 DNA-directed RNA polymerase II subunit RPB11-a |
GO:0006366P:transcription by RNA polymerase II GO:0005515F:protein binding GO:0016491F:oxidoreductase activity GO:0005665C:RNA polymerase II, core complex |
Transcription Regulation
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SRR953582_primary_scf7180001960605_1-2874
Len: 2,873 bp
Hits: 20
E-val: 7.40E-85
Sim: 86.25%
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XP_016101550.1 lysine-specific demethylase 4B-like |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0032259P:methylation GO:0008168F:methyltransferase activity GO:0008270F:zinc ion binding GO:0140684F:histone H3K9me2/H3K9me3 demethylase activity GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001960646_435-1145
Len: 710 bp
Hits: 20
E-val: 1.10E-122
Sim: 91.89%
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XP_018923067.1 homeobox protein Hox-A10b-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001961054_1-1894
Len: 1,893 bp
Hits: 20
E-val: 3.30E-25
Sim: 77.28%
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XP_018929247.1 storkhead-box protein 2-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR953582_primary_scf7180001961612_1-1705
Len: 1,704 bp
Hits: 20
E-val: 2.30E-150
Sim: 98.56%
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XP_018922659.1 LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit BPTF-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0008270F:zinc ion binding GO:0016589C:NURF complex |
Transcription Regulation
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SRR953582_primary_scf7180001962253_429-1420
Len: 991 bp
Hits: 20
E-val: 7.10E-35
Sim: 99.49%
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XP_016400489.1 DNA-directed RNA polymerase I subunit RPA1-like, partial |
GO:0000398P:mRNA splicing, via spliceosome GO:0001059P:transcription by RNA polymerase IV GO:0001060P:transcription by RNA polymerase V GO:0006281P:DNA repair GO:0006360P:transcription by RNA polymerase I GO:0006366P:transcription by RNA polymerase II GO:0006383P:transcription by RNA polymerase III GO:0006390P:mitochondrial transcription GO:0009303P:rRNA transcription GO:0014032P:neural crest cell development GO:0042793P:plastid transcription GO:0048703P:embryonic viscerocranium morphogenesis GO:0070534P:protein K63-linked ubiquitination GO:0003677F:DNA binding GO:0003899F:DNA-directed RNA polymerase activity GO:0061630F:ubiquitin protein ligase activity GO:0000974C:Prp19 complex GO:0005654C:nucleoplasm GO:0005736C:RNA polymerase I complex GO:0005739C:mitochondrion GO:0071006C:U2-type catalytic step 1 spliceosome |
Transcription Regulation
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SRR953582_primary_scf7180001962823_374-1410
Len: 1,036 bp
Hits: 20
E-val: 1.00E-76
Sim: 93.64%
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RXN09644.1homeobox Hox-B6b |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009952P:anterior/posterior pattern specification GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001963512_1-524
Len: 523 bp
Hits: 20
E-val: 9.00E-98
Sim: 98.12%
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XP_018923072.1 homeobox protein Hox-A13b |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0033333P:fin development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001963608_471-1018
Len: 547 bp
Hits: 20
E-val: 1.80E-27
Sim: 93.08%
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XP_005159637.1grainyhead-like protein 2 homolog isoform X1 |
GO:0021555P:midbrain-hindbrain boundary morphogenesis GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048839P:inner ear development GO:0060561P:apoptotic process involved in morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
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SRR953582_primary_scf7180001963711_243-830
Len: 587 bp
Hits: 20
E-val: 2.40E-59
Sim: 72.32%
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XP_016361512.1 forkhead box protein K1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific |
Transcription Regulation
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SRR953582_primary_scf7180001964399_726-1263
Len: 537 bp
Hits: 20
E-val: 2.30E-72
Sim: 94.03%
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XP_018974914.1 T-cell leukemia homeobox protein 1-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0048536P:spleen development GO:0050776P:regulation of immune response GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001964724_580-1588
Len: 1,008 bp
Hits: 20
E-val: 1.30E-39
Sim: 93.43%
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XP_018976070.1 paired box protein Pax-9-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045658P:regulation of neutrophil differentiation GO:0050830P:defense response to Gram-positive bacterium GO:0060021P:roof of mouth development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001964758_1-528
Len: 527 bp
Hits: 20
E-val: 2.30E-64
Sim: 83.05%
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XP_018981452.1 PR domain zinc finger protein 1-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0045165P:cell fate commitment GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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