Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180001964954_1-1868
Len: 1,867 bp
Hits: 20
E-val: 5.70E-70
Sim: 87.33%
|
XP_026112606.1bromodomain and WD repeat-containing protein 3-like isoform X3 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007010P:cytoskeleton organization GO:0008360P:regulation of cell shape GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001965384_1406-1807
Len: 401 bp
Hits: 20
E-val: 4.40E-44
Sim: 84.63%
|
XP_018937805.1 transcription cofactor vestigial-like protein 2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001966083_1-1739
Len: 1,738 bp
Hits: 20
E-val: 1.50E-19
Sim: 95.01%
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XP_016124435.1 protein TANC2-like |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0043516P:regulation of DNA damage response, signal transduction by p53 class mediator GO:0061001P:regulation of dendritic spine morphogenesis GO:0042799F:histone H4K20 methyltransferase activity GO:0005634C:nucleus GO:0005700C:polytene chromosome GO:0043197C:dendritic spine |
Transcription Regulation
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SRR953582_primary_scf7180001966802_1-919
Len: 918 bp
Hits: 20
E-val: 2.90E-27
Sim: 95.15%
|
XP_026138040.1PHD finger protein 12 isoform X1 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003714F:transcription corepressor activity GO:0008270F:zinc ion binding GO:0016020C:membrane GO:0070822C:Sin3-type complex |
Transcription Regulation
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SRR953582_primary_scf7180001967233_611-2067
Len: 1,456 bp
Hits: 20
E-val: 9.70E-25
Sim: 90.88%
|
ROI15854.1THO complex subunit 2 |
GO:0006397P:mRNA processing GO:0006406P:mRNA export from nucleus GO:0003729F:mRNA binding GO:0000445C:THO complex part of transcription export complex |
Transcription Regulation
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SRR953582_primary_scf7180001967360_421-2075
Len: 1,654 bp
Hits: 20
E-val: 1.70E-25
Sim: 96.82%
|
XP_024263948.1LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2-like, partial |
GO:0006367P:transcription initiation at RNA polymerase II promoter GO:0006413P:translational initiation GO:0000976F:transcription cis-regulatory region binding GO:0003682F:chromatin binding GO:0003743F:translation initiation factor activity GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0005669C:transcription factor TFIID complex |
Transcription Regulation
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SRR953582_primary_scf7180001968332_1-1554
Len: 1,553 bp
Hits: 20
E-val: 1.50E-15
Sim: 72.63%
|
XP_005160063.1storkhead-box protein 2 isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR953582_primary_scf7180001968336_1-1575
Len: 1,574 bp
Hits: 20
E-val: 6.80E-40
Sim: 94.15%
|
XP_026095017.1insulin gene enhancer protein isl-2a-like isoform X4 |
GO:0003139P:secondary heart field specification GO:0007409P:axonogenesis GO:0031017P:exocrine pancreas development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048665P:neuron fate specification GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000987F:cis-regulatory region sequence-specific DNA binding GO:0046872F:metal ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001972257_610-1131
Len: 521 bp
Hits: 20
E-val: 3.10E-90
Sim: 90.62%
|
XP_018928188.1 forkhead box protein I1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009653P:anatomical structure morphogenesis GO:0009957P:epidermal cell fate specification GO:0062236P:ionocyte differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001972669_1-365
Len: 364 bp
Hits: 20
E-val: 2.80E-66
Sim: 99.92%
|
AAH76175.1Six6b protein, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0008283P:cell population proliferation GO:0043010P:camera-type eye development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
Transcription Regulation
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SRR953582_primary_scf7180001973145_1-354
Len: 353 bp
Hits: 20
E-val: 1.50E-19
Sim: 96.35%
|
XP_018964032.1 LIM/homeobox protein LMX-1.2-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030182P:neuron differentiation GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046872F:metal ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001975974_1-1063
Len: 1,062 bp
Hits: 20
E-val: 6.70E-23
Sim: 99.71%
|
XP_026067376.1zinc finger and BTB domain-containing protein 44-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002003691_1778-4384
Len: 2,606 bp
Hits: 20
E-val: 9.60E-225
Sim: 91.86%
|
XP_018953826.1 protein SPT2 homolog isoform X1 |
GO:0006334P:nucleosome assembly GO:0006360P:transcription by RNA polymerase I GO:0003677F:DNA binding GO:0042393F:histone binding GO:0005730C:nucleolus |
Transcription Regulation
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SRR953582_primary_scf7180002004005_1-5701
Len: 5,700 bp
Hits: 20
E-val: 0
Sim: 83.28%
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XP_018953565.1 LOW QUALITY PROTEIN: probable helicase senataxin |
GO:0006369P:termination of RNA polymerase II transcription GO:0001147F:transcription termination site sequence-specific DNA binding GO:0003723F:RNA binding GO:0004386F:helicase activity GO:0016604C:nuclear body |
Transcription Regulation
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SRR953582_primary_scf7180002004516_1-917
Len: 916 bp
Hits: 20
E-val: 4.00E-16
Sim: 97.05%
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XP_018965719.1 LOW QUALITY PROTEIN: THAP domain-containing protein 1-like |
GO:0001935P:endothelial cell proliferation GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm |
Transcription Regulation
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SRR953582_primary_scf7180002004756_1-5077
Len: 5,076 bp
Hits: 20
E-val: 8.10E-34
Sim: 65.52%
|
XP_016103264.1 sodium/potassium-transporting ATPase subunit beta-3-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006883P:intracellular sodium ion homeostasis GO:0030007P:intracellular potassium ion homeostasis GO:0036376P:sodium ion export across plasma membrane GO:0051726P:regulation of cell cycle GO:1990573P:potassium ion import across plasma membrane GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0001671F:ATPase activator activity GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005890C:sodium:potassium-exchanging ATPase complex |
Transcription Regulation
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SRR953582_primary_scf7180002004957_1-4057
Len: 4,056 bp
Hits: 20
E-val: 6.70E-124
Sim: 83.03%
|
XP_018935781.1 LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD2-like |
GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0032259P:methylation GO:0046975F:histone H3K36 methyltransferase activity GO:0005634C:nucleus GO:0005694C:chromosome |
Transcription Regulation
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SRR953582_primary_scf7180002005079_1-4114
Len: 4,113 bp
Hits: 20
E-val: 3.50E-43
Sim: 91.98%
|
XP_018930533.1 lysyl oxidase homolog 2A-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001666P:response to hypoxia GO:0001935P:endothelial cell proliferation GO:0002040P:sprouting angiogenesis GO:0010718P:positive regulation of epithelial to mesenchymal transition GO:0018057P:peptidyl-lysine oxidation GO:0030199P:collagen fibril organization GO:0032332P:positive regulation of chondrocyte differentiation GO:0043542P:endothelial cell migration GO:0070828P:heterochromatin organization GO:1902455P:negative regulation of stem cell population maintenance GO:0004720F:protein-lysine 6-oxidase activity GO:0005507F:copper ion binding GO:0005509F:calcium ion binding GO:0000785C:chromatin GO:0005604C:basement membrane GO:0005615C:extracellular space GO:0005634C:nucleus GO:0005783C:endoplasmic reticulum GO:0016020C:membrane |
Transcription Regulation
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SRR953582_primary_scf7180002005319_1903-4501
Len: 2,598 bp
Hits: 20
E-val: 1.40E-90
Sim: 60.39%
|
XP_018922127.1 thyrotroph embryonic factor isoform X1 |
GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity |
Transcription Regulation
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SRR953582_primary_scf7180002005417_1-2203
Len: 2,202 bp
Hits: 20
E-val: 0
Sim: 78.41%
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XP_018979096.1 LOW QUALITY PROTEIN: zinc finger homeobox protein 3-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045664P:regulation of neuron differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002005938_1-2983
Len: 2,982 bp
Hits: 20
E-val: 4.00E-17
Sim: 92%
|
XP_016319252.1 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like |
GO:0006355P:regulation of DNA-templated transcription GO:0007059P:chromosome segregation GO:0019888F:protein phosphatase regulator activity GO:0000159C:protein phosphatase type 2A complex GO:0005634C:nucleus GO:0005829C:cytosol |
Transcription Regulation
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SRR953582_primary_scf7180002006679_1-2454
Len: 2,453 bp
Hits: 20
E-val: 0
Sim: 89.72%
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XP_018934260.1 ataxin-1-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0003723F:RNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002007396_1-1563
Len: 1,562 bp
Hits: 20
E-val: 9.40E-42
Sim: 96.33%
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XP_021446654.1ETS domain-containing transcription factor ERF-like, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030154P:cell differentiation GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002007461_571-3340
Len: 2,769 bp
Hits: 20
E-val: 6.70E-59
Sim: 52.16%
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XP_018979866.1 cyclic AMP-dependent transcription factor ATF-6 beta-like isoform X1 |
GO:0006355P:regulation of DNA-templated transcription GO:0006357P:regulation of transcription by RNA polymerase II GO:0030968P:endoplasmic reticulum unfolded protein response GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
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SRR953582_primary_scf7180002007748_155-856
Len: 701 bp
Hits: 20
E-val: 9.80E-124
Sim: 90.02%
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XP_018953648.1 SERTA domain-containing protein 2-like |
GO:0045893P:positive regulation of DNA-templated transcription GO:0051301P:cell division GO:0003713F:transcription coactivator activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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