Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002007855_1290-3203
Len: 1,913 bp
Hits: 20
E-val: 0
Sim: 92.7%
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XP_018977426.1 transcriptional regulator Kaiso-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001817P:regulation of cytokine production GO:0002682P:regulation of immune system process GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm |
Transcription Regulation
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SRR953582_primary_scf7180002007870_1902-2775
Len: 873 bp
Hits: 20
E-val: 3.40E-17
Sim: 91.85%
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XP_018948033.1 protein ripply3-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003139P:secondary heart field specification GO:0009880P:embryonic pattern specification GO:0003714F:transcription corepressor activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002007938_3204-4292
Len: 1,088 bp
Hits: 20
E-val: 6.70E-63
Sim: 62.31%
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XP_018933775.1 heterogeneous nuclear ribonucleoprotein U-like, partial |
GO:0000380P:alternative mRNA splicing, via spliceosome GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003723F:RNA binding GO:1990841F:promoter-specific chromatin binding GO:0005634C:nucleus GO:1990904C:ribonucleoprotein complex |
Transcription Regulation
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SRR953582_primary_scf7180002008827_28-1995
Len: 1,967 bp
Hits: 20
E-val: 2.80E-245
Sim: 78.04%
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XP_026097245.1zinc fingers and homeoboxes protein 3-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002008917_1446-2652
Len: 1,206 bp
Hits: 20
E-val: 8.10E-33
Sim: 73.39%
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XP_016145390.1 MHC class II regulatory factor RFX1-like |
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity |
Transcription Regulation
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SRR953582_primary_scf7180002008981_818-2716
Len: 1,898 bp
Hits: 20
E-val: 0
Sim: 93.93%
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XP_018971126.1 transcriptional regulator Kaiso-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001817P:regulation of cytokine production GO:0002682P:regulation of immune system process GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm |
Transcription Regulation
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SRR953582_primary_scf7180002009169_1-2780
Len: 2,779 bp
Hits: 20
E-val: 4.90E-25
Sim: 99.68%
|
XP_018957937.1 general transcription factor IIE subunit 2-like isoform X1 |
GO:0006367P:transcription initiation at RNA polymerase II promoter GO:0001097F:TFIIH-class transcription factor complex binding GO:0003677F:DNA binding GO:0005673C:transcription factor TFIIE complex |
Transcription Regulation
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SRR953582_primary_scf7180002009192_530-2779
Len: 2,249 bp
Hits: 20
E-val: 0
Sim: 91.2%
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XP_018931161.1 zinc finger protein 438-like isoform X2 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002009269_1-3254
Len: 3,253 bp
Hits: 20
E-val: 1.90E-116
Sim: 59.52%
|
XP_018927249.1 enolase-like |
GO:0006096P:glycolytic process GO:0006355P:regulation of DNA-templated transcription GO:0000287F:magnesium ion binding GO:0004634F:phosphopyruvate hydratase activity GO:0016829F:lyase activity GO:0043565F:sequence-specific DNA binding GO:0046872F:metal ion binding GO:0000015C:phosphopyruvate hydratase complex GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002009536_1-3432
Len: 3,431 bp
Hits: 20
E-val: 2.90E-11
Sim: 80.47%
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XP_026102711.1transcription factor E3-like isoform X3 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0005654C:nucleoplasm GO:0005737C:cytoplasm |
Transcription Regulation
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SRR953582_primary_scf7180002010521_127-2501
Len: 2,374 bp
Hits: 20
E-val: 3.90E-140
Sim: 67.08%
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RXN10233.1zinc finger 16-like protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding |
Transcription Regulation
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SRR953582_primary_scf7180002010783_1-2637
Len: 2,636 bp
Hits: 20
E-val: 1.10E-23
Sim: 90.17%
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XP_016392499.1 LOW QUALITY PROTEIN: protein AF-10 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0008270F:zinc ion binding GO:0031491F:nucleosome binding GO:0042393F:histone binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002010895_1-2787
Len: 2,786 bp
Hits: 20
E-val: 4.10E-96
Sim: 96.75%
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ROL42644.1Zinc finger homeobox protein 4 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002010951_1211-3089
Len: 1,878 bp
Hits: 20
E-val: 4.80E-16
Sim: 99.09%
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XP_017566381.1 peptidyl-prolyl cis-trans isomerase FKBP1A-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0140839F:RNA polymerase II CTD heptapeptide repeat P3 isomerase activity GO:0140840F:RNA polymerase II CTD heptapeptide repeat P6 isomerase activity GO:0033017C:sarcoplasmic reticulum membrane |
Transcription Regulation
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SRR953582_primary_scf7180002010981_1-3663
Len: 3,662 bp
Hits: 20
E-val: 2.30E-86
Sim: 90.76%
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RXN24968.1zinc finger protein 711 isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:1903706P:regulation of hemopoiesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0060388C:vitelline envelope |
Transcription Regulation
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SRR953582_primary_scf7180002011129_1-2248
Len: 2,247 bp
Hits: 20
E-val: 4.00E-17
Sim: 97.87%
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XP_026106226.1mediator of RNA polymerase II transcription subunit 12-like isoform X3 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003713F:transcription coactivator activity GO:0008013F:beta-catenin binding GO:0016592C:mediator complex |
Transcription Regulation
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SRR953582_primary_scf7180002011397_1-2432
Len: 2,431 bp
Hits: 20
E-val: 0
Sim: 95.75%
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XP_018980534.1 LOW QUALITY PROTEIN: zinc finger protein 646-like |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002011678_2970-3493
Len: 523 bp
Hits: 20
E-val: 1.50E-97
Sim: 97.32%
|
XP_018974420.1 homeobox protein Hox-A13b-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0033333P:fin development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002011714_1-2322
Len: 2,321 bp
Hits: 20
E-val: 2.60E-32
Sim: 94.52%
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XP_016355415.1 endothelial PAS domain-containing protein 1-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0071456P:cellular response to hypoxia GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005737C:cytoplasm |
Transcription Regulation
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SRR953582_primary_scf7180002011786_1-305
Len: 304 bp
Hits: 20
E-val: 3.80E-48
Sim: 96%
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XP_018981791.1 forkhead box protein Q1-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009653P:anatomical structure morphogenesis GO:0030154P:cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002011823_933-2519
Len: 1,586 bp
Hits: 20
E-val: 3.80E-22
Sim: 93.01%
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XP_018938785.1 transcription factor SOX-6-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007417P:central nervous system development GO:0007519P:skeletal muscle tissue development GO:0032332P:positive regulation of chondrocyte differentiation GO:0042694P:muscle cell fate specification GO:0060612P:adipose tissue development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002012413_1-2685
Len: 2,684 bp
Hits: 20
E-val: 8.30E-22
Sim: 97.58%
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XP_026089685.1akirin-2-like isoform X1 |
GO:0015031P:protein transport GO:0045089P:positive regulation of innate immune response GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003712F:transcription coregulator activity GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002012419_1-2293
Len: 2,292 bp
Hits: 20
E-val: 3.80E-23
Sim: 95.56%
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CAF97756.1unnamed protein product |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0035092P:sperm DNA condensation GO:0035886P:vascular associated smooth muscle cell differentiation GO:0042981P:regulation of apoptotic process GO:0045814P:negative regulation of gene expression, epigenetic GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051155P:positive regulation of striated muscle cell differentiation GO:0051726P:regulation of cell cycle GO:1902275P:regulation of chromatin organization GO:1905168P:positive regulation of double-strand break repair via homologous recombination GO:0005515F:protein binding GO:0140463F:chromatin-protein adaptor activity GO:0140767F:enzyme-substrate adaptor activity GO:0000786C:nucleosome GO:0005730C:nucleolus GO:0005737C:cytoplasm GO:0016604C:nuclear body GO:0031965C:nuclear membrane GO:0032777C:piccolo histone acetyltransferase complex GO:0035267C:NuA4 histone acetyltransferase complex GO:0035861C:site of double-strand break |
Transcription Regulation
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SRR953582_primary_scf7180002012656_901-2299
Len: 1,398 bp
Hits: 20
E-val: 2.50E-33
Sim: 72.78%
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XP_005168525.1transcription factor AP-4 isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002012742_1-2639
Len: 2,638 bp
Hits: 20
E-val: 2.20E-216
Sim: 91.38%
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XP_018961152.1 transcription factor Sp7-like |
GO:0001649P:osteoblast differentiation GO:0006357P:regulation of transcription by RNA polymerase II GO:0010628P:positive regulation of gene expression GO:0033688P:regulation of osteoblast proliferation GO:0060363P:cranial suture morphogenesis GO:0097187P:dentinogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:1990841F:promoter-specific chromatin binding |
Transcription Regulation
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