Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002013185_1-3913
Len: 3,912 bp
Hits: 20
E-val: 6.70E-20
Sim: 98.06%
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XP_016396143.1 ras-responsive element-binding protein 1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002014070_1-2001
Len: 2,000 bp
Hits: 20
E-val: 1.30E-274
Sim: 90.41%
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XP_026092524.1histone-lysine N-methyltransferase 2D-like isoform X3 |
GO:0006338P:chromatin remodeling GO:0032259P:methylation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003713F:transcription coactivator activity GO:0008270F:zinc ion binding GO:0140999F:histone H3K4 trimethyltransferase activity GO:0044666C:MLL3/4 complex |
Transcription Regulation
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SRR953582_primary_scf7180002014315_1-1976
Len: 1,975 bp
Hits: 20
E-val: 4.50E-41
Sim: 95.26%
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XP_021446654.1ETS domain-containing transcription factor ERF-like, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030154P:cell differentiation GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002014563_2803-3852
Len: 1,049 bp
Hits: 20
E-val: 1.10E-174
Sim: 91.22%
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XP_018969810.1 zinc finger and BTB domain-containing protein 5-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0042030F:ATPase inhibitor activity GO:0051087F:protein-folding chaperone binding GO:0000785C:chromatin GO:0005667C:transcription regulator complex GO:0005765C:lysosomal membrane GO:0031519C:PcG protein complex |
Transcription Regulation
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SRR953582_primary_scf7180002014587_1-1048
Len: 1,047 bp
Hits: 20
E-val: 1.60E-16
Sim: 98.24%
|
CAF90397.1unnamed protein product, partial |
GO:0006325P:chromatin organization GO:0045892P:negative regulation of DNA-templated transcription GO:0003682F:chromatin binding GO:0008270F:zinc ion binding GO:0042393F:histone binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002014865_1-2440
Len: 2,439 bp
Hits: 20
E-val: 3.60E-96
Sim: 81.93%
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XP_018953357.1 forkhead box protein N4 |
GO:0001947P:heart looping GO:0003170P:heart valve development GO:0008016P:regulation of heart contraction GO:0010842P:retina layer formation GO:0035881P:amacrine cell differentiation GO:0036302P:atrioventricular canal development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0060579P:ventral spinal cord interneuron fate commitment GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000987F:cis-regulatory region sequence-specific DNA binding GO:0003682F:chromatin binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002015027_69-3311
Len: 3,242 bp
Hits: 20
E-val: 2.20E-40
Sim: 53.9%
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XP_018967730.1 max-interacting protein 1 isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002015940_888-3468
Len: 2,580 bp
Hits: 20
E-val: 1.40E-69
Sim: 79.5%
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XP_018973702.1 LOW QUALITY PROTEIN: PHD finger protein 20-like protein 1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0008270F:zinc ion binding GO:0140034F:methylation-dependent protein binding GO:0005634C:nucleus GO:0044545C:NSL complex |
Transcription Regulation
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SRR953582_primary_scf7180002016105_704-2884
Len: 2,180 bp
Hits: 20
E-val: 4.70E-108
Sim: 70.38%
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XP_016386476.1 ras-responsive element-binding protein 1-like |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002016108_1-1904
Len: 1,903 bp
Hits: 20
E-val: 5.10E-98
Sim: 98.27%
|
ROL50171.1Myogenic factor 6 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0035914P:skeletal muscle cell differentiation GO:0045663P:positive regulation of myoblast differentiation GO:0048743P:positive regulation of skeletal muscle fiber development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002017516_1-1572
Len: 1,571 bp
Hits: 20
E-val: 8.00E-25
Sim: 96.73%
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XP_013998481.1 zinc finger and BTB domain-containing protein 10-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002017834_465-2222
Len: 1,757 bp
Hits: 20
E-val: 1.50E-72
Sim: 96.82%
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XP_018966088.1 homeobox protein cut-like 1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002018185_1-1157
Len: 1,156 bp
Hits: 20
E-val: 1.70E-27
Sim: 56.67%
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RXN23108.1transcription factor SOX-13 isoform X3 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045165P:cell fate commitment GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002018332_1-2091
Len: 2,090 bp
Hits: 20
E-val: 1.10E-29
Sim: 73.9%
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XP_016110866.1 myelin regulatory factor-like protein |
GO:0016540P:protein autoprocessing GO:0045893P:positive regulation of DNA-templated transcription GO:0003700F:DNA-binding transcription factor activity GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus GO:0005789C:endoplasmic reticulum membrane |
Transcription Regulation
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SRR953582_primary_scf7180002018451_413-2217
Len: 1,804 bp
Hits: 20
E-val: 3.10E-20
Sim: 94.32%
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XP_026099575.1unconventional prefoldin RPB5 interactor 1-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003682F:chromatin binding GO:0003714F:transcription corepressor activity GO:0019212F:phosphatase inhibitor activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002018551_778-2409
Len: 1,631 bp
Hits: 20
E-val: 4.50E-111
Sim: 55.59%
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XP_018927567.1 nuclear receptor subfamily 1 group D member 1-like |
GO:0010468P:regulation of gene expression GO:0048511P:rhythmic process GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0043229C:intracellular organelle |
Transcription Regulation
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SRR953582_primary_scf7180002018904_1-501
Len: 500 bp
Hits: 20
E-val: 6.90E-31
Sim: 66.52%
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XP_018943580.1 ankyrin repeat domain-containing protein 13D-like |
Transcription Regulation
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SRR953582_primary_scf7180002019105_259-1322
Len: 1,063 bp
Hits: 20
E-val: 4.30E-70
Sim: 92.39%
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XP_018962606.1 homeobox protein Hox-C6 isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009952P:anterior/posterior pattern specification GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002019261_503-2103
Len: 1,600 bp
Hits: 20
E-val: 1.10E-127
Sim: 85.24%
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XP_018925254.1 eomesodermin-like |
GO:0001707P:mesoderm formation GO:0001714P:endodermal cell fate specification GO:0002302P:CD8-positive, alpha-beta T cell differentiation involved in immune response GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002020178_1-1599
Len: 1,598 bp
Hits: 20
E-val: 3.60E-20
Sim: 89.14%
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RXN12394.1mediator of RNA polymerase II transcription subunit 27 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0046549P:retinal cone cell development GO:0003713F:transcription coactivator activity GO:0016592C:mediator complex |
Transcription Regulation
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SRR953582_primary_scf7180002020270_1-2349
Len: 2,348 bp
Hits: 20
E-val: 8.10E-122
Sim: 97.73%
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XP_018969636.1 CREB-binding protein-like |
GO:0006338P:chromatin remodeling GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048511P:rhythmic process GO:0003713F:transcription coactivator activity GO:0008270F:zinc ion binding GO:0031490F:chromatin DNA binding GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0140297F:DNA-binding transcription factor binding GO:0140908F:histone H3K122 acetyltransferase activity GO:0000123C:histone acetyltransferase complex GO:0005654C:nucleoplasm GO:0005667C:transcription regulator complex GO:0005737C:cytoplasm |
Transcription Regulation
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SRR953582_primary_scf7180002020619_348-1457
Len: 1,109 bp
Hits: 20
E-val: 2.90E-210
Sim: 86.92%
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XP_018951197.1 forkhead box protein L1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0030154P:cell differentiation GO:0030500P:regulation of bone mineralization GO:0035138P:pectoral fin morphogenesis GO:0043010P:camera-type eye development GO:0045892P:negative regulation of DNA-templated transcription GO:0060536P:cartilage morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002020911_1-1502
Len: 1,501 bp
Hits: 20
E-val: 3.40E-222
Sim: 75.77%
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XP_018929086.1 sal-like protein 1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0035091F:phosphatidylinositol binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002021119_225-954
Len: 729 bp
Hits: 20
E-val: 2.00E-18
Sim: 89.51%
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XP_018942076.1 protein ripply2-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001756P:somitogenesis GO:0009798P:axis specification GO:0009880P:embryonic pattern specification GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002021274_521-2148
Len: 1,627 bp
Hits: 20
E-val: 2.60E-82
Sim: 94.14%
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XP_018960262.1 transcription factor LBX1-like |
GO:0000070P:mitotic sister chromatid segregation GO:0006357P:regulation of transcription by RNA polymerase II GO:0042692P:muscle cell differentiation GO:0051382P:kinetochore assembly GO:0060026P:convergent extension GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:1990837F:sequence-specific double-stranded DNA binding GO:0000775C:chromosome, centromeric region GO:0005634C:nucleus |
Transcription Regulation
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