Gene Function: Transcription Regulation

Functional and statistical data for significant genes

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Showing 1,388 results (Page 48 of 56)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR953582_primary_scf7180002030677_1-1702
Len: 1,701 bp
Hits: 20
E-val: 6.90E-22
Sim: 74.11%
 CAG11131.1unnamed protein product
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0000976F:transcription cis-regulatory region binding
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002030916_1-1517
Len: 1,516 bp
Hits: 20
E-val: 1.60E-219
Sim: 90.01%
 XP_018969209.1 LOW QUALITY PROTEIN: zinc finger transcription factor Trps1-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003700F:DNA-binding transcription factor activity
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002031142_363-1971
Len: 1,608 bp
Hits: 20
E-val: 4.20E-29
Sim: 96.78%
 XP_016141788.1 transcription factor COE3-like
GO:0006355P:regulation of DNA-templated transcription
GO:0007399P:nervous system development
GO:0003677F:DNA binding
GO:0003700F:DNA-binding transcription factor activity
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002031617_1-1022
Len: 1,021 bp
Hits: 17
E-val: 4.60E-21
Sim: 56.47%
 XP_018978514.1 protein NLRC5-like
GO:0045345P:positive regulation of MHC class I biosynthetic process
GO:0045348P:positive regulation of MHC class II biosynthetic process
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0071277P:cellular response to calcium ion
GO:0005524F:ATP binding
GO:0005544F:calcium-dependent phospholipid binding
GO:0005886C:plasma membrane
Transcription Regulation
SRR953582_primary_scf7180002032014_1-1719
Len: 1,718 bp
Hits: 20
E-val: 5.70E-24
Sim: 92.33%
 XP_016108863.1 FYVE, RhoGEF and PH domain-containing protein 6-like
GO:0006355P:regulation of DNA-templated transcription
GO:0003700F:DNA-binding transcription factor activity
GO:0005085F:guanyl-nucleotide exchange factor activity
GO:0008270F:zinc ion binding
GO:0043565F:sequence-specific DNA binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
GO:0005856C:cytoskeleton
Transcription Regulation
SRR953582_primary_scf7180002032052_55-1548
Len: 1,493 bp
Hits: 20
E-val: 4.10E-18
Sim: 94.68%
 XP_026136897.1elongation factor 1-gamma
GO:0006351P:DNA-templated transcription
GO:0006414P:translational elongation
GO:0003746F:translation elongation factor activity
GO:0000428C:DNA-directed RNA polymerase complex
GO:0005634C:nucleus
GO:0005737C:cytoplasm
Transcription Regulation
SRR953582_primary_scf7180002032262_1333-1700
Len: 367 bp
Hits: 20
E-val: 2.00E-51
Sim: 87.69%
 XP_018972897.1 transcriptional regulator Myc-B isoform X1
GO:0000122P:negative regulation of transcription by RNA polymerase II
GO:0002244P:hematopoietic progenitor cell differentiation
GO:0008284P:positive regulation of cell population proliferation
GO:0042246P:tissue regeneration
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0060216P:definitive hemopoiesis
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0046983F:protein dimerization activity
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002033042_374-2039
Len: 1,665 bp
Hits: 20
E-val: 4.60E-71
Sim: 94.22%
 XP_018939070.1 T-cell leukemia homeobox protein 1-like, partial
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0048536P:spleen development
GO:0050776P:regulation of immune response
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002033619_71-1647
Len: 1,576 bp
Hits: 20
E-val: 2.50E-18
Sim: 86.65%
 XP_026117763.1poly(rC)-binding protein 3-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0003729F:mRNA binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
Transcription Regulation
SRR953582_primary_scf7180002033889_702-1477
Len: 775 bp
Hits: 20
E-val: 9.80E-16
Sim: 97.5%
 NP_957203.1cyclic AMP-responsive element-binding protein 1
GO:0001756P:somitogenesis
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0030917P:midbrain-hindbrain boundary development
GO:0060028P:convergent extension involved in axis elongation
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0035497F:cAMP response element binding
GO:1990589C:ATF4-CREB1 transcription factor complex
Transcription Regulation
SRR953582_primary_scf7180002033910_1-1115
Len: 1,114 bp
Hits: 20
E-val: 1.50E-41
Sim: 65.66%
 XP_018927011.1 homeobox protein meis3-like isoform X2
GO:0009653P:anatomical structure morphogenesis
GO:0030902P:hindbrain development
GO:0031017P:exocrine pancreas development
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0048484P:enteric nervous system development
GO:1901166P:neural crest cell migration involved in autonomic nervous system development
GO:0005515F:protein binding
GO:0008233F:peptidase activity
GO:0043565F:sequence-specific DNA binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
Transcription Regulation
SRR953582_primary_scf7180002034849_1-1928
Len: 1,927 bp
Hits: 20
E-val: 1.40E-10
Sim: 60.93%
 KMQ82292.1paired box protein and transposase domain containing protein, partial
GO:0006313P:DNA transposition
GO:0006355P:regulation of DNA-templated transcription
GO:0015074P:DNA integration
GO:0003676F:nucleic acid binding
GO:0003677F:DNA binding
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002035313_1-715
Len: 714 bp
Hits: 20
E-val: 1.40E-37
Sim: 95.3%
 RXN16708.1AT-rich interactive domain-containing 1B-like protein
GO:0006338P:chromatin remodeling
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0035176P:social behavior
GO:0036269P:swimming behavior
GO:0045893P:positive regulation of DNA-templated transcription
GO:0003677F:DNA binding
GO:0031491F:nucleosome binding
GO:0005654C:nucleoplasm
GO:0016514C:SWI/SNF complex
GO:0035060C:brahma complex
GO:0071565C:nBAF complex
Transcription Regulation
SRR953582_primary_scf7180002035872_459-1280
Len: 821 bp
Hits: 20
E-val: 4.90E-34
Sim: 89.6%
 XP_018966786.1 RNA helicase Mov10l1-like
GO:0035194P:regulatory ncRNA-mediated post-transcriptional gene silencing
GO:0003723F:RNA binding
GO:0004386F:helicase activity
GO:0005829C:cytosol
GO:0043186C:P granule
Transcription Regulation
SRR953582_primary_scf7180002036557_1-1127
Len: 1,126 bp
Hits: 20
E-val: 4.40E-25
Sim: 76.42%
 XP_018964192.1 histone acetyltransferase KAT2A-like
GO:0001819P:positive regulation of cytokine production
GO:0007507P:heart development
GO:0007616P:long-term memory
GO:0018393P:internal peptidyl-lysine acetylation
GO:0040029P:epigenetic regulation of gene expression
GO:0045589P:regulation of regulatory T cell differentiation
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0048167P:regulation of synaptic plasticity
GO:0060173P:limb development
GO:0060349P:bone morphogenesis
GO:0061035P:regulation of cartilage development
GO:0106227P:peptidyl-lysine glutarylation
GO:1903010P:regulation of bone development
GO:0003682F:chromatin binding
GO:0003713F:transcription coactivator activity
GO:0010485F:histone H4 acetyltransferase activity
GO:0043992F:histone H3K9 acetyltransferase activity
GO:0043998F:histone H2A acetyltransferase activity
GO:0044013F:histone H2B acetyltransferase activity
GO:0106078F:histone succinyltransferase activity
GO:0106229F:histone glutaryltransferase activity
GO:0005634C:nucleus
GO:0005813C:centrosome
GO:0045252C:oxoglutarate dehydrogenase complex
GO:0140672C:ATAC complex
Transcription Regulation
SRR953582_primary_scf7180002037168_1-1483
Len: 1,482 bp
Hits: 20
E-val: 3.10E-26
Sim: 91.12%
 XP_016423039.1 histone-lysine N-methyltransferase setd3-like
GO:0001558P:regulation of cell growth
GO:0006338P:chromatin remodeling
GO:0008283P:cell population proliferation
GO:0018021P:peptidyl-histidine methylation
GO:0030047P:actin modification
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0070472P:regulation of uterine smooth muscle contraction
GO:0003713F:transcription coactivator activity
GO:0003779F:actin binding
GO:0018064F:protein-L-histidine N-tele-methyltransferase activity
GO:0042800F:histone H3K4 methyltransferase activity
GO:0046975F:histone H3K36 methyltransferase activity
GO:0005737C:cytoplasm
GO:0005912C:adherens junction
GO:0005923C:bicellular tight junction
Transcription Regulation
SRR953582_primary_scf7180002038509_648-1716
Len: 1,068 bp
Hits: 20
E-val: 4.50E-96
Sim: 94%
 XP_018980819.1 homeobox protein Hox-A9a-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0009952P:anterior/posterior pattern specification
GO:0009954P:proximal/distal pattern formation
GO:0048704P:embryonic skeletal system morphogenesis
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002038597_1152-1454
Len: 302 bp
Hits: 20
E-val: 4.90E-48
Sim: 89.19%
 XP_018932415.1 myocyte-specific enhancer factor 2C-like
GO:0007507P:heart development
GO:0030154P:cell differentiation
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0042826F:histone deacetylase binding
GO:0046983F:protein dimerization activity
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002040093_1-1795
Len: 1,794 bp
Hits: 20
E-val: 4.70E-21
Sim: 97.71%
 RXN18640.1forkhead box N3-like protein
GO:0006355P:regulation of DNA-templated transcription
GO:0006367P:transcription initiation at RNA polymerase II promoter
GO:0000987F:cis-regulatory region sequence-specific DNA binding
GO:0003700F:DNA-binding transcription factor activity
GO:0046872F:metal ion binding
GO:0005672C:transcription factor TFIIA complex
Transcription Regulation
SRR953582_primary_scf7180002040246_227-1470
Len: 1,243 bp
Hits: 20
E-val: 7.00E-32
Sim: 69.38%
 XP_016123404.1 transcription factor COE3 isoform X2
GO:0006355P:regulation of DNA-templated transcription
GO:0007399P:nervous system development
GO:0003677F:DNA binding
GO:0003700F:DNA-binding transcription factor activity
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002045269_503-1204
Len: 701 bp
Hits: 20
E-val: 1.30E-131
Sim: 98.83%
 XP_018981000.1 homeobox protein SIX3-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0007420P:brain development
GO:0021631P:optic nerve morphogenesis
GO:0048596P:embryonic camera-type eye morphogenesis
GO:0070654P:sensory epithelium regeneration
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
GO:0005667C:transcription regulator complex
Transcription Regulation
SRR953582_primary_scf7180002045463_1-962
Len: 961 bp
Hits: 20
E-val: 6.40E-25
Sim: 100%
 XP_026099727.1histone-lysine N-methyltransferase 2D-like isoform X6
GO:0006338P:chromatin remodeling
GO:0032259P:methylation
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0003713F:transcription coactivator activity
GO:0008270F:zinc ion binding
GO:0140999F:histone H3K4 trimethyltransferase activity
GO:0044666C:MLL3/4 complex
Transcription Regulation
SRR953582_primary_scf7180002046309_1-2181
Len: 2,180 bp
Hits: 20
E-val: 3.90E-46
Sim: 89.62%
 XP_018954865.1 E3 ubiquitin-protein ligase TRIM33-like
GO:0016567P:protein ubiquitination
GO:0030218P:erythrocyte differentiation
GO:0030593P:neutrophil chemotaxis
GO:0033333P:fin development
GO:0034243P:regulation of transcription elongation by RNA polymerase II
GO:0035166P:post-embryonic hemopoiesis
GO:0048066P:developmental pigmentation
GO:0048246P:macrophage chemotaxis
GO:0060215P:primitive hemopoiesis
GO:1990822P:basic amino acid transmembrane transport
GO:0003700F:DNA-binding transcription factor activity
GO:0008270F:zinc ion binding
GO:0015174F:basic amino acid transmembrane transporter activity
GO:0016740F:transferase activity
GO:0016874F:ligase activity
GO:0043565F:sequence-specific DNA binding
GO:0000785C:chromatin
GO:0005634C:nucleus
GO:0016020C:membrane
Transcription Regulation
SRR953582_primary_scf7180002046434_1-1065
Len: 1,064 bp
Hits: 20
E-val: 1.70E-42
Sim: 93.96%
 XP_016093907.1 zinc finger protein 704 isoform X3
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003700F:DNA-binding transcription factor activity
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002046847_1-1429
Len: 1,428 bp
Hits: 20
E-val: 1.30E-255
Sim: 88.1%
 XP_018975582.1 zinc finger and BTB domain-containing protein 2-like
GO:0000122P:negative regulation of transcription by RNA polymerase II
GO:0001817P:regulation of cytokine production
GO:0002682P:regulation of immune system process
GO:0070131P:positive regulation of mitochondrial translation
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0005654C:nucleoplasm
GO:0005739C:mitochondrion
Transcription Regulation