Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924327_primary_scf7180002276510_1-1345
Len: 1,344 bp
Hits: 20
E-val: 4.50E-77
Sim: 86.23%
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XP_026052927.1lysine-specific demethylase 4B-like isoform X2 |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0032259P:methylation GO:0008168F:methyltransferase activity GO:0008270F:zinc ion binding GO:0140684F:histone H3K9me2/H3K9me3 demethylase activity GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002276640_1-809
Len: 808 bp
Hits: 20
E-val: 4.10E-150
Sim: 90.74%
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XP_018981791.1 forkhead box protein Q1-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009653P:anatomical structure morphogenesis GO:0030154P:cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002276708_1-772
Len: 771 bp
Hits: 20
E-val: 6.50E-28
Sim: 99.69%
|
XP_019905389.1LIM domain-binding protein 1 isoform X4 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003712F:transcription coregulator activity GO:0030274F:LIM domain binding GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
Transcription Regulation
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SRR924327_primary_scf7180002276928_1-1437
Len: 1,436 bp
Hits: 20
E-val: 8.70E-10
Sim: 86.54%
|
ROL51810.1Transcription factor COE3 |
GO:0006355P:regulation of DNA-templated transcription GO:0048468P:cell development GO:0048731P:system development GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002277489_384-1226
Len: 842 bp
Hits: 20
E-val: 2.70E-152
Sim: 81.19%
|
XP_018950632.1 class A basic helix-loop-helix protein 9-like |
GO:0007423P:sensory organ development GO:0009653P:anatomical structure morphogenesis GO:0033339P:pectoral fin development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0061564P:axon development GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0070888F:E-box binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002277960_1-1577
Len: 1,576 bp
Hits: 20
E-val: 1.70E-54
Sim: 99.61%
|
XP_018941965.1 PR domain zinc finger protein 1-like, partial |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0045165P:cell fate commitment GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924327_primary_scf7180002277974_26-901
Len: 875 bp
Hits: 20
E-val: 1.40E-151
Sim: 91.31%
|
XP_018936655.1 homeobox protein unc-4 homolog isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0030154P:cell differentiation GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:1990837F:sequence-specific double-stranded DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002278737_513-1480
Len: 967 bp
Hits: 20
E-val: 5.50E-24
Sim: 100%
|
XP_026134657.1cell division cycle and apoptosis regulator protein 1-like isoform X4 |
GO:0006355P:regulation of DNA-templated transcription GO:0016226P:iron-sulfur cluster assembly GO:0051301P:cell division GO:0005506F:iron ion binding GO:0051536F:iron-sulfur cluster binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924327_primary_scf7180002279192_251-1250
Len: 999 bp
Hits: 20
E-val: 8.70E-25
Sim: 98.69%
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XP_018929749.1 THO complex subunit 3 |
GO:0006406P:mRNA export from nucleus GO:0000445C:THO complex part of transcription export complex |
Transcription Regulation
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SRR924327_primary_scf7180002281330_1-723
Len: 722 bp
Hits: 20
E-val: 7.00E-24
Sim: 82.9%
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XP_026136135.1nuclear factor NF-kappa-B p105 subunit-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0009653P:anatomical structure morphogenesis GO:0043124P:negative regulation of canonical NF-kappaB signal transduction GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0051059F:NF-kappaB binding GO:0140311F:protein sequestering activity GO:0005829C:cytosol GO:0035525C:NF-kappaB p50/p65 complex |
Transcription Regulation
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SRR924327_primary_scf7180002281594_1-737
Len: 736 bp
Hits: 20
E-val: 2.10E-129
Sim: 76.08%
|
XP_018977986.1 SERTA domain-containing protein 3-like |
GO:0003713F:transcription coactivator activity GO:0004074F:biliverdin reductase [NAD(P)H] activity GO:0042602F:riboflavin reductase (NADPH) activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924327_primary_scf7180002282295_132-947
Len: 815 bp
Hits: 20
E-val: 1.40E-118
Sim: 96.09%
|
XP_018927355.1 transcription factor Sp5-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0032475P:otolith formation GO:0048332P:mesoderm morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
Transcription Regulation
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SRR924327_primary_scf7180002282815_936-1085
Len: 149 bp
Hits: 20
E-val: 2.60E-18
Sim: 100%
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NP_001004596.1general transcription factor IIH subunit 1 |
GO:0006289P:nucleotide-excision repair GO:0006360P:transcription by RNA polymerase I GO:0006366P:transcription by RNA polymerase II GO:0006590P:thyroid hormone generation GO:0006979P:response to oxidative stress GO:0042446P:hormone biosynthetic process GO:0042744P:hydrogen peroxide catabolic process GO:0048066P:developmental pigmentation GO:0098869P:cellular oxidant detoxification GO:0004601F:peroxidase activity GO:0005509F:calcium ion binding GO:0016174F:NAD(P)H oxidase H2O2-forming activity GO:0020037F:heme binding GO:0000439C:transcription factor TFIIH core complex GO:0005675C:transcription factor TFIIH holo complex GO:0005737C:cytoplasm GO:0016020C:membrane |
Transcription Regulation
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SRR924327_primary_scf7180002283396_62-1091
Len: 1,029 bp
Hits: 20
E-val: 7.10E-22
Sim: 87.17%
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XP_018930967.1 CREB-regulated transcription coactivator 2-like isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051289P:protein homotetramerization GO:0071320P:cellular response to cAMP GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003713F:transcription coactivator activity GO:0008140F:cAMP response element binding protein binding GO:0005634C:nucleus GO:0005789C:endoplasmic reticulum membrane |
Transcription Regulation
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SRR924327_primary_scf7180002335514_272-2214
Len: 1,942 bp
Hits: 20
E-val: 5.00E-117
Sim: 89.64%
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XP_026145012.1transcription factor Sp4-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
Transcription Regulation
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SRR924327_primary_scf7180002335649_1048-1844
Len: 796 bp
Hits: 20
E-val: 5.20E-12
Sim: 93.33%
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AAH56832.1E2F transcription factor 4 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0090575C:RNA polymerase II transcription regulator complex |
Transcription Regulation
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SRR924327_primary_scf7180002336954_1-692
Len: 691 bp
Hits: 20
E-val: 7.30E-39
Sim: 93.61%
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XP_016394260.1 DNA-directed RNA polymerase, mitochondrial-like |
GO:0001059P:transcription by RNA polymerase IV GO:0001060P:transcription by RNA polymerase V GO:0006360P:transcription by RNA polymerase I GO:0006366P:transcription by RNA polymerase II GO:0006383P:transcription by RNA polymerase III GO:0006390P:mitochondrial transcription GO:0042793P:plastid transcription GO:0001018F:mitochondrial promoter sequence-specific DNA binding GO:0003899F:DNA-directed RNA polymerase activity GO:0034245C:mitochondrial DNA-directed RNA polymerase complex |
Transcription Regulation
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SRR924327_primary_scf7180002337019_8-1545
Len: 1,537 bp
Hits: 20
E-val: 1.10E-58
Sim: 98.64%
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XP_016336272.1 nuclear receptor corepressor 2-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003714F:transcription corepressor activity GO:0000785C:chromatin GO:0005654C:nucleoplasm GO:0032991C:protein-containing complex |
Transcription Regulation
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SRR924327_primary_scf7180002337659_1-1279
Len: 1,278 bp
Hits: 20
E-val: 1.30E-12
Sim: 100%
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XP_026063338.1MHC class II regulatory factor RFX1-like isoform X4 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002338390_1-761
Len: 760 bp
Hits: 20
E-val: 3.50E-58
Sim: 84.31%
|
XP_018976465.1 myelin transcription factor 1-like protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002338394_1-912
Len: 911 bp
Hits: 20
E-val: 9.70E-15
Sim: 88.84%
|
XP_018948029.1 protein ripply3-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003139P:secondary heart field specification GO:0009880P:embryonic pattern specification GO:0003714F:transcription corepressor activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002338441_1-1080
Len: 1,079 bp
Hits: 20
E-val: 6.50E-34
Sim: 61.03%
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AYN64431.1interferon regulatory factor |
GO:0002376P:immune system process GO:0006355P:regulation of DNA-templated transcription GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0000976F:transcription cis-regulatory region binding GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002338508_620-1342
Len: 722 bp
Hits: 20
E-val: 7.70E-15
Sim: 88.71%
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XP_018942076.1 protein ripply2-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0032525P:somite rostral/caudal axis specification GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002338741_1-363
Len: 362 bp
Hits: 20
E-val: 1.40E-62
Sim: 94.58%
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XP_018965191.1 homeobox protein EMX1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0021537P:telencephalon development GO:0021862P:early neuron differentiation in forebrain GO:0021952P:central nervous system projection neuron axonogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
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SRR924327_primary_scf7180002339035_1-1216
Len: 1,215 bp
Hits: 20
E-val: 1.50E-15
Sim: 99.75%
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XP_026070868.1histone deacetylase 8-like |
GO:0006355P:regulation of DNA-templated transcription GO:0031507P:heterochromatin formation GO:0031078F:histone H3K14 deacetylase activity, hydrolytic mechanism GO:0032129F:histone H3K9 deacetylase activity, hydrolytic mechanism GO:0034739F:histone H4K16 deacetylase activity, hydrolytic mechanism GO:0046872F:metal ion binding GO:0140937F:histone H4K12 deacetylase activity, hydrolytic mechanism GO:0160008F:protein decrotonylase activity GO:0180032F:histone H4K5 deacetylase activity, hydrolytic mechanism GO:0180033F:histone H4K8 deacetylase activity, hydrolytic mechanism GO:1990162F:histone H3K4 deacetylase activity, hydrolytic mechanism GO:0005634C:nucleus GO:0005694C:chromosome GO:0005737C:cytoplasm |
Transcription Regulation
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