Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002149826_1-2463
Len: 2,462 bp
Hits: 20
E-val: 3.00E-236
Sim: 87.45%
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XP_018958473.1 LOW QUALITY PROTEIN: germinal-center associated nuclear protein |
GO:0006406P:mRNA export from nucleus GO:0006695P:cholesterol biosynthetic process GO:0016104P:triterpenoid biosynthetic process GO:0000250F:lanosterol synthase activity GO:0003723F:RNA binding GO:0005737C:cytoplasm GO:0005811C:lipid droplet GO:0070390C:transcription export complex 2 |
Transcription Regulation
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SRR953582_primary_scf7180002150146_162-2744
Len: 2,582 bp
Hits: 20
E-val: 1.00E-32
Sim: 94.32%
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RXN20067.1nucleosome-remodeling factor subunit BPTF-like protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0008270F:zinc ion binding GO:0016589C:NURF complex |
Transcription Regulation
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SRR953582_primary_scf7180002150146_2860-4103
Len: 1,243 bp
Hits: 20
E-val: 2.60E-26
Sim: 100%
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XP_026063602.1nucleosome-remodeling factor subunit BPTF-like isoform X9 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0008270F:zinc ion binding GO:0016589C:NURF complex |
Transcription Regulation
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SRR953582_primary_scf7180002150425_1-2741
Len: 2,740 bp
Hits: 20
E-val: 5.30E-80
Sim: 68.89%
|
XP_016327504.1 zinc finger protein 408-like isoform X2 |
GO:0006355P:regulation of DNA-templated transcription GO:0005488F:binding |
Transcription Regulation
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SRR953582_primary_scf7180002150953_2129-3406
Len: 1,277 bp
Hits: 20
E-val: 7.00E-27
Sim: 91.87%
|
CAG03344.1unnamed protein product, partial |
GO:0006367P:transcription initiation at RNA polymerase II promoter GO:0006413P:translational initiation GO:0003743F:translation initiation factor activity GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0005669C:transcription factor TFIID complex |
Transcription Regulation
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SRR953582_primary_scf7180002151398_927-3083
Len: 2,156 bp
Hits: 20
E-val: 0
Sim: 93.15%
|
XP_016329401.1 methylcytosine dioxygenase TET1-like isoform X1 |
GO:0001666P:response to hypoxia GO:0032656P:regulation of interleukin-13 production GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0071222P:cellular response to lipopolysaccharide GO:0141167P:chromosomal 5-methylcytosine DNA demethylation, oxidation pathway GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0070579F:DNA 5-methylcytosine dioxygenase activity GO:0005634C:nucleus GO:0005694C:chromosome |
Transcription Regulation
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SRR953582_primary_scf7180002151690_1-4247
Len: 4,246 bp
Hits: 20
E-val: 5.30E-31
Sim: 98.29%
|
XP_026096804.1AT-rich interactive domain-containing protein 1A-like isoform X2 |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0031491F:nucleosome binding GO:0005654C:nucleoplasm GO:0016514C:SWI/SNF complex GO:0035060C:brahma complex GO:0071565C:nBAF complex |
Transcription Regulation
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SRR953582_primary_scf7180002151986_1836-2904
Len: 1,068 bp
Hits: 20
E-val: 1.50E-46
Sim: 98.01%
|
XP_017166161.1 transformation/transcription domain-associated protein, partial |
GO:0001964P:startle response GO:0006281P:DNA repair GO:0006355P:regulation of DNA-templated transcription GO:0035675P:neuromast hair cell development GO:0042481P:regulation of odontogenesis GO:0060536P:cartilage morphogenesis GO:0140861P:DNA repair-dependent chromatin remodeling GO:0000124C:SAGA complex GO:0005634C:nucleus GO:0035267C:NuA4 histone acetyltransferase complex |
Transcription Regulation
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SRR953582_primary_scf7180002153059_463-814
Len: 351 bp
Hits: 20
E-val: 8.10E-34
Sim: 82.8%
|
XP_018946113.1 paired box protein Pax-5-like |
GO:0003309P:type B pancreatic cell differentiation GO:0006357P:regulation of transcription by RNA polymerase II GO:0030900P:forebrain development GO:0042593P:glucose homeostasis GO:0060041P:retina development in camera-type eye GO:1990798P:pancreas regeneration GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002153663_235-4131
Len: 3,896 bp
Hits: 20
E-val: 7.10E-256
Sim: 86.99%
|
XP_018955608.1 histone-lysine N-methyltransferase PRDM9-like |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0007129P:homologous chromosome pairing at meiosis GO:0007292P:female gamete generation GO:0032259P:methylation GO:0043066P:negative regulation of apoptotic process GO:0048232P:male gamete generation GO:1905516P:positive regulation of fertilization GO:1990918P:double-strand break repair involved in meiotic recombination GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0010844F:recombination hotspot binding GO:0042803F:protein homodimerization activity GO:0140941F:histone H4K20me methyltransferase activity GO:0140944F:histone H4K20 monomethyltransferase activity GO:0140949F:histone H3K9 trimethyltransferase activity GO:0140955F:histone H3K36 trimethyltransferase activity GO:0140999F:histone H3K4 trimethyltransferase activity GO:0005634C:nucleus GO:0005694C:chromosome |
Transcription Regulation
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SRR953582_primary_scf7180002153681_651-1901
Len: 1,250 bp
Hits: 20
E-val: 6.70E-83
Sim: 81.95%
|
XP_018964686.1 zinc finger protein 648-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001817P:regulation of cytokine production GO:0002682P:regulation of immune system process GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm |
Transcription Regulation
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SRR953582_primary_scf7180002153775_273-4052
Len: 3,779 bp
Hits: 20
E-val: 4.10E-184
Sim: 71.17%
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XP_018957746.1 nuclear receptor coactivator 4-like |
GO:0006879P:intracellular iron ion homeostasis GO:0009725P:response to hormone GO:0045893P:positive regulation of DNA-templated transcription GO:0003713F:transcription coactivator activity |
Transcription Regulation
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SRR953582_primary_scf7180002154059_1-2168
Len: 2,167 bp
Hits: 20
E-val: 5.00E-134
Sim: 90.57%
|
XP_018967975.1 zinc finger protein 37-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002154068_1-1180
Len: 1,179 bp
Hits: 20
E-val: 6.70E-141
Sim: 84.99%
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XP_018938236.1 amyloid beta A4 precursor protein-binding family B member 2-like |
GO:0006355P:regulation of DNA-templated transcription GO:0001540F:amyloid-beta binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR953582_primary_scf7180002154139_1531-2813
Len: 1,282 bp
Hits: 20
E-val: 7.80E-18
Sim: 98.93%
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XP_016334047.1 transcription elongation factor B polypeptide 2-like, partial |
GO:0006368P:transcription elongation by RNA polymerase II GO:0006414P:translational elongation GO:0003676F:nucleic acid binding GO:0003746F:translation elongation factor activity GO:0030891C:VCB complex GO:0070449C:elongin complex |
Transcription Regulation
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SRR953582_primary_scf7180002154245_1-2801
Len: 2,800 bp
Hits: 20
E-val: 9.00E-35
Sim: 78.83%
|
XP_026109042.1forkhead box protein P1-B-like isoform X1 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002154684_1-3296
Len: 3,295 bp
Hits: 20
E-val: 2.70E-22
Sim: 91.49%
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XP_026084849.1cyclic AMP-responsive element-binding protein 5-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0035497F:cAMP response element binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002154946_225-2406
Len: 2,181 bp
Hits: 20
E-val: 4.10E-35
Sim: 93.35%
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XP_018967493.1 transcription cofactor vestigial-like protein 4 isoform X1 |
GO:0045892P:negative regulation of DNA-templated transcription GO:0001223F:transcription coactivator binding |
Transcription Regulation
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SRR953582_primary_scf7180002155137_793-2510
Len: 1,717 bp
Hits: 20
E-val: 3.50E-74
Sim: 92.11%
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XP_018958995.1 homeobox even-skipped homolog protein 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009953P:dorsal/ventral pattern formation GO:0036342P:post-anal tail morphogenesis GO:0042661P:regulation of mesodermal cell fate specification GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002155319_1-205
Len: 204 bp
Hits: 20
E-val: 2.50E-19
Sim: 100%
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XP_018975018.1 transcription elongation factor A protein 3-like isoform X1 |
GO:0006368P:transcription elongation by RNA polymerase II GO:0006414P:translational elongation GO:0003676F:nucleic acid binding GO:0003746F:translation elongation factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002155323_1-3068
Len: 3,067 bp
Hits: 20
E-val: 2.70E-125
Sim: 92.91%
|
XP_026103547.1zinc finger protein 16-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0000785C:chromatin GO:0005667C:transcription regulator complex GO:0031519C:PcG protein complex |
Transcription Regulation
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SRR953582_primary_scf7180002155591_1-2426
Len: 2,425 bp
Hits: 20
E-val: 3.60E-56
Sim: 76.55%
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XP_026100549.1nuclear receptor corepressor 2-like isoform X3 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003714F:transcription corepressor activity GO:0000785C:chromatin GO:0005654C:nucleoplasm GO:0032991C:protein-containing complex |
Transcription Regulation
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SRR953582_primary_scf7180002156119_1-684
Len: 683 bp
Hits: 20
E-val: 4.30E-124
Sim: 97.17%
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XP_018979384.1 zinc finger BED domain-containing protein 4-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002158756_210-740
Len: 530 bp
Hits: 20
E-val: 7.20E-87
Sim: 91.84%
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XP_016352330.1 homeobox protein TGIF1-like isoform X1 |
GO:0006355P:regulation of DNA-templated transcription GO:0007420P:brain development GO:0009966P:regulation of signal transduction GO:0003677F:DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002159675_2110-3363
Len: 1,253 bp
Hits: 20
E-val: 2.00E-143
Sim: 89.82%
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XP_018973564.1 zinc finger protein 260-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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