Gene Function: Transcription Regulation

Functional and statistical data for significant genes

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Showing 1,388 results (Page 54 of 56)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR953582_primary_scf7180002204628_1-1250
Len: 1,249 bp
Hits: 20
E-val: 3.40E-18
Sim: 59.3%
 XP_018963462.1 bromodomain-containing protein 7-like isoform X1
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0070577F:obsolete lysine-acetylated histone binding
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002204925_197-1213
Len: 1,016 bp
Hits: 20
E-val: 5.40E-22
Sim: 97.01%
 XP_021083509.1nuclear receptor subfamily 2 group C member 2
GO:0006355P:regulation of DNA-templated transcription
GO:0003700F:DNA-binding transcription factor activity
GO:0008270F:zinc ion binding
GO:0043565F:sequence-specific DNA binding
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002206683_1-1491
Len: 1,490 bp
Hits: 20
E-val: 1.60E-35
Sim: 73.56%
 KPP79951.1mediator of RNA polymerase II transcription subunit 12-like
GO:0001822P:kidney development
GO:0002761P:regulation of myeloid leukocyte differentiation
GO:0007492P:endoderm development
GO:0007507P:heart development
GO:0014032P:neural crest cell development
GO:0021591P:ventricular system development
GO:0021654P:rhombomere boundary formation
GO:0021954P:central nervous system neuron development
GO:0021982P:pineal gland development
GO:0021986P:habenula development
GO:0030901P:midbrain development
GO:0035118P:embryonic pectoral fin morphogenesis
GO:0043583P:ear development
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0048702P:embryonic neurocranium morphogenesis
GO:0048703P:embryonic viscerocranium morphogenesis
GO:0050935P:iridophore differentiation
GO:0003700F:DNA-binding transcription factor activity
GO:0003713F:transcription coactivator activity
GO:0140585F:promoter-enhancer loop anchoring activity
GO:0016592C:mediator complex
Transcription Regulation
SRR953582_primary_scf7180002207078_539-1652
Len: 1,113 bp
Hits: 20
E-val: 9.20E-116
Sim: 95.29%
 XP_018926919.1 paired box protein Pax-1, partial
GO:0001501P:skeletal system development
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0060037P:pharyngeal system development
GO:1904888P:cranial skeletal system development
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002208501_560-2198
Len: 1,638 bp
Hits: 20
E-val: 7.10E-16
Sim: 75.02%
 XP_018966103.1 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like
GO:0006360P:transcription by RNA polymerase I
GO:0006366P:transcription by RNA polymerase II
GO:0042797P:tRNA transcription by RNA polymerase III
GO:0003677F:DNA binding
GO:0003899F:DNA-directed RNA polymerase activity
GO:0005665C:RNA polymerase II, core complex
GO:0005666C:RNA polymerase III complex
GO:0005736C:RNA polymerase I complex
Transcription Regulation
SRR953582_primary_scf7180002208776_1-1346
Len: 1,345 bp
Hits: 20
E-val: 3.60E-42
Sim: 96.76%
 XP_018981679.1 homeobox protein Hox-C8a
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0031017P:exocrine pancreas development
GO:0031018P:endocrine pancreas development
GO:0035118P:embryonic pectoral fin morphogenesis
GO:0036268P:swimming
GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002209278_1-1373
Len: 1,372 bp
Hits: 20
E-val: 7.80E-16
Sim: 53.21%
 XP_016144528.1 transcription initiation factor IIA subunit 1
GO:0006355P:regulation of DNA-templated transcription
GO:0006366P:transcription by RNA polymerase II
GO:0006367P:transcription initiation at RNA polymerase II promoter
GO:0000987F:cis-regulatory region sequence-specific DNA binding
GO:0003677F:DNA binding
GO:0003700F:DNA-binding transcription factor activity
GO:0043565F:sequence-specific DNA binding
GO:0046872F:metal ion binding
GO:0005634C:nucleus
GO:0005672C:transcription factor TFIIA complex
Transcription Regulation
SRR953582_primary_scf7180002209531_543-2038
Len: 1,495 bp
Hits: 20
E-val: 6.50E-24
Sim: 63.14%
 XP_016424420.1 phosphatidate phosphatase LPIN2-like
GO:0009062P:fatty acid catabolic process
GO:0019432P:triglyceride biosynthetic process
GO:0032869P:cellular response to insulin stimulus
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0003713F:transcription coactivator activity
GO:0008195F:phosphatidate phosphatase activity
GO:0016787F:hydrolase activity
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002209740_1-1161
Len: 1,160 bp
Hits: 20
E-val: 2.00E-52
Sim: 59.69%
 XP_016382931.1 transcription factor-like 5 protein
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0032502P:developmental process
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:1990837F:sequence-specific double-stranded DNA binding
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002209855_408-806
Len: 398 bp
Hits: 20
E-val: 6.20E-67
Sim: 90.01%
 XP_018961443.1 protein atonal homolog 7-like isoform X1
GO:0007346P:regulation of mitotic cell cycle
GO:0010842P:retina layer formation
GO:0036269P:swimming behavior
GO:0043473P:pigmentation
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0048663P:neuron fate commitment
GO:0050769P:positive regulation of neurogenesis
GO:1902336P:positive regulation of retinal ganglion cell axon guidance
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0046983F:protein dimerization activity
GO:0070888F:E-box binding
GO:0005634C:nucleus
GO:0030424C:axon
GO:0043204C:perikaryon
Transcription Regulation
SRR953582_primary_scf7180002210095_873-1528
Len: 655 bp
Hits: 20
E-val: 3.60E-19
Sim: 96.09%
 EMP36682.1Krueppel-like factor 12
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002211491_1-1085
Len: 1,084 bp
Hits: 20
E-val: 5.70E-62
Sim: 91.67%
 XP_018944511.1 zinc finger E-box-binding homeobox 1-like
GO:0000122P:negative regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002211939_1014-1432
Len: 418 bp
Hits: 20
E-val: 1.80E-11
Sim: 92.6%
 XP_026050790.1lethal(3)malignant brain tumor-like protein 3 isoform X1
GO:0006325P:chromatin organization
GO:0045892P:negative regulation of DNA-templated transcription
GO:0003682F:chromatin binding
GO:0008270F:zinc ion binding
GO:0042393F:histone binding
GO:0005634C:nucleus
GO:0016020C:membrane
Transcription Regulation
SRR953582_primary_scf7180002213073_1-991
Len: 990 bp
Hits: 20
E-val: 2.70E-18
Sim: 97.63%
 ROL46982.1Myelin transcription factor 1
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0007399P:nervous system development
GO:0030154P:cell differentiation
GO:1904888P:cranial skeletal system development
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002214009_1-1394
Len: 1,393 bp
Hits: 20
E-val: 3.40E-51
Sim: 64.8%
 XP_018945736.1 DNA-directed RNA polymerases I and III subunit RPAC1-like
GO:0006351P:DNA-templated transcription
GO:0042254P:ribosome biogenesis
GO:0048703P:embryonic viscerocranium morphogenesis
GO:0051216P:cartilage development
GO:0000428C:DNA-directed RNA polymerase complex
GO:0140513C:nuclear protein-containing complex
Transcription Regulation
SRR953582_primary_scf7180002215074_447-1416
Len: 969 bp
Hits: 20
E-val: 1.30E-62
Sim: 70.39%
 XP_018966080.1 LOW QUALITY PROTEIN: PR domain zinc finger protein 15-like
GO:0010468P:regulation of gene expression
GO:0060319P:primitive erythrocyte differentiation
GO:0003700F:DNA-binding transcription factor activity
GO:0005488F:binding
Transcription Regulation
SRR953582_primary_scf7180002216632_1-976
Len: 975 bp
Hits: 20
E-val: 2.00E-111
Sim: 96.07%
 XP_018966572.1 vascular endothelial zinc finger 1-like isoform X1
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002217029_1-1085
Len: 1,084 bp
Hits: 20
E-val: 2.80E-29
Sim: 74.13%
 RXN09055.1TAF5-like RNA polymerase II p300 CBP-associated factor-associated factor 65 kDa subunit 5L
GO:0006366P:transcription by RNA polymerase II
GO:0045893P:positive regulation of DNA-templated transcription
GO:0003713F:transcription coactivator activity
GO:0016251F:RNA polymerase II general transcription initiation factor activity
GO:0000124C:SAGA complex
GO:0033276C:transcription factor TFTC complex
Transcription Regulation
SRR953582_primary_scf7180002217380_1-1307
Len: 1,306 bp
Hits: 20
E-val: 5.00E-20
Sim: 84.31%
 XP_018929677.1 zinc finger protein GLIS1-like
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0033036P:macromolecule localization
GO:0071705P:nitrogen compound transport
GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270F:zinc ion binding
GO:0005643C:nuclear pore
GO:0016020C:membrane
Transcription Regulation
SRR953582_primary_scf7180002219807_1-1901
Len: 1,900 bp
Hits: 20
E-val: 6.70E-74
Sim: 54.93%
 XP_026123713.1paired amphipathic helix protein Sin3a-like isoform X1
GO:0000122P:negative regulation of transcription by RNA polymerase II
GO:0006355P:regulation of DNA-templated transcription
GO:0007507P:heart development
GO:0045892P:negative regulation of DNA-templated transcription
GO:0003714F:transcription corepressor activity
GO:0000785C:chromatin
GO:0005634C:nucleus
GO:0070822C:Sin3-type complex
Transcription Regulation
SRR953582_primary_scf7180002220808_1-869
Len: 868 bp
Hits: 20
E-val: 3.30E-20
Sim: 76.99%
 XP_026080922.1storkhead-box protein 2-like isoform X1
GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
Transcription Regulation
SRR953582_primary_scf7180002226021_630-1369
Len: 739 bp
Hits: 20
E-val: 3.80E-17
Sim: 93.53%
 RXN26703.1RNA-binding 27 isoform X2
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677F:DNA binding
GO:0003723F:RNA binding
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002227168_593-1161
Len: 568 bp
Hits: 20
E-val: 3.10E-19
Sim: 94.18%
 XP_018942968.1 homeobox protein BarH-like 1
GO:0002053P:positive regulation of mesenchymal cell proliferation
GO:0006357P:regulation of transcription by RNA polymerase II
GO:0051216P:cartilage development
GO:0060037P:pharyngeal system development
GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634C:nucleus
Transcription Regulation
SRR953582_primary_scf7180002227187_1-420
Len: 419 bp
Hits: 20
E-val: 3.00E-27
Sim: 89.57%
 XP_016325991.1 poly [ADP-ribose] polymerase 14-like
GO:0010629P:negative regulation of gene expression
GO:0045892P:negative regulation of DNA-templated transcription
GO:0070212P:protein poly-ADP-ribosylation
GO:0003714F:transcription corepressor activity
GO:0003950F:NAD+ poly-ADP-ribosyltransferase activity
GO:0016779F:nucleotidyltransferase activity
GO:0005634C:nucleus
GO:0005737C:cytoplasm
Transcription Regulation
SRR953582_primary_scf7180002227690_1-906
Len: 905 bp
Hits: 20
E-val: 2.20E-35
Sim: 87.49%
 XP_018927829.1 PAX3- and PAX7-binding protein 1-like
GO:0000398P:mRNA splicing, via spliceosome
GO:0045944P:positive regulation of transcription by RNA polymerase II
GO:0003677F:DNA binding
GO:0005634C:nucleus
Transcription Regulation