Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002228088_1-1466
Len: 1,465 bp
Hits: 20
E-val: 2.80E-19
Sim: 85.43%
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XP_026112727.1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like |
GO:0001843P:neural tube closure GO:0007420P:brain development GO:0021999P:neural plate anterior/posterior regionalization GO:0030182P:neuron differentiation GO:0034728P:nucleosome organization GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0060319P:primitive erythrocyte differentiation GO:2000177P:regulation of neural precursor cell proliferation GO:0004386F:helicase activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0031491F:nucleosome binding GO:0036310F:ATP-dependent DNA/DNA annealing activity GO:0042393F:histone binding GO:0140750F:nucleosome array spacer activity GO:0005654C:nucleoplasm GO:0016589C:NURF complex GO:0090537C:CERF complex |
Transcription Regulation
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SRR953582_primary_scf7180002228503_1-679
Len: 678 bp
Hits: 20
E-val: 5.40E-26
Sim: 91.95%
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XP_026076570.1forkhead box protein K2-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002229148_1-1133
Len: 1,132 bp
Hits: 20
E-val: 3.40E-17
Sim: 98.74%
|
XP_026064855.1AT-rich interactive domain-containing protein 2-like isoform X1 |
GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0035060C:brahma complex |
Transcription Regulation
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SRR953582_primary_scf7180002231530_1-522
Len: 521 bp
Hits: 20
E-val: 1.40E-26
Sim: 84.57%
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XP_018961343.1 peptidyl-prolyl cis-trans isomerase FKBP9-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006457P:protein folding GO:0005509F:calcium ion binding GO:0140839F:RNA polymerase II CTD heptapeptide repeat P3 isomerase activity GO:0140840F:RNA polymerase II CTD heptapeptide repeat P6 isomerase activity GO:0005783C:endoplasmic reticulum |
Transcription Regulation
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SRR953582_primary_scf7180002231552_1-640
Len: 639 bp
Hits: 20
E-val: 1.30E-18
Sim: 99.57%
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XP_026058679.1bromodomain-containing protein 1-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0008270F:zinc ion binding GO:0070776C:MOZ/MORF histone acetyltransferase complex |
Transcription Regulation
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SRR953582_primary_scf7180002231998_1-1048
Len: 1,047 bp
Hits: 20
E-val: 2.20E-42
Sim: 99.57%
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XP_010785743.1 transcription initiation factor IIB-like |
GO:0001174P:transcriptional start site selection at RNA polymerase II promoter GO:0006338P:chromatin remodeling GO:0006413P:translational initiation GO:0051123P:RNA polymerase II preinitiation complex assembly GO:1990114P:RNA polymerase II core complex assembly GO:0000979F:RNA polymerase II core promoter sequence-specific DNA binding GO:0003743F:translation initiation factor activity GO:0008270F:zinc ion binding GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0017025F:TBP-class protein binding GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0140908F:histone H3K122 acetyltransferase activity GO:0005634C:nucleus GO:0005694C:chromosome GO:0097550C:transcription preinitiation complex |
Transcription Regulation
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SRR953582_primary_scf7180002232366_1-935
Len: 934 bp
Hits: 20
E-val: 1.90E-26
Sim: 70.68%
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XP_022527628.1mediator of RNA polymerase II transcription subunit 12 |
GO:0001822P:kidney development GO:0002761P:regulation of myeloid leukocyte differentiation GO:0007492P:endoderm development GO:0007507P:heart development GO:0014032P:neural crest cell development GO:0021591P:ventricular system development GO:0021654P:rhombomere boundary formation GO:0021954P:central nervous system neuron development GO:0021982P:pineal gland development GO:0021986P:habenula development GO:0030901P:midbrain development GO:0035118P:embryonic pectoral fin morphogenesis GO:0043583P:ear development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048702P:embryonic neurocranium morphogenesis GO:0048703P:embryonic viscerocranium morphogenesis GO:0050935P:iridophore differentiation GO:0003700F:DNA-binding transcription factor activity GO:0003713F:transcription coactivator activity GO:0140585F:promoter-enhancer loop anchoring activity GO:0016592C:mediator complex |
Transcription Regulation
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SRR953582_primary_scf7180002233383_1-973
Len: 972 bp
Hits: 20
E-val: 2.90E-89
Sim: 77.2%
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XP_018961593.1 MKL/myocardin-like protein 1 isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051145P:smooth muscle cell differentiation GO:0003713F:transcription coactivator activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002235414_985-1242
Len: 257 bp
Hits: 20
E-val: 1.00E-22
Sim: 84.06%
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XP_016146011.1 LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3b-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003714F:transcription corepressor activity GO:0070822C:Sin3-type complex |
Transcription Regulation
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SRR953582_primary_scf7180002235504_1-763
Len: 762 bp
Hits: 20
E-val: 9.00E-30
Sim: 78.87%
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XP_026098333.1transcription factor Sp4-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
Transcription Regulation
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SRR953582_primary_scf7180002236112_398-1045
Len: 647 bp
Hits: 20
E-val: 2.80E-101
Sim: 86.35%
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XP_016113043.1 protein lin-54 homolog |
GO:0006355P:regulation of DNA-templated transcription GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002239066_325-1182
Len: 857 bp
Hits: 20
E-val: 9.10E-164
Sim: 96.72%
|
XP_018940338.1 chorion-specific transcription factor GCMb-like |
GO:0009887P:animal organ morphogenesis GO:0009957P:epidermal cell fate specification GO:0042063P:gliogenesis GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051216P:cartilage development GO:0055074P:calcium ion homeostasis GO:0055078P:sodium ion homeostasis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002240226_1-866
Len: 865 bp
Hits: 20
E-val: 5.20E-34
Sim: 61.03%
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AYN64431.1interferon regulatory factor |
GO:0002376P:immune system process GO:0006355P:regulation of DNA-templated transcription GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0000976F:transcription cis-regulatory region binding GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002240492_1-693
Len: 692 bp
Hits: 20
E-val: 1.00E-120
Sim: 97.72%
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XP_018926433.1 LOW QUALITY PROTEIN: N-myc proto-oncogene protein-like |
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002244418_1-1142
Len: 1,141 bp
Hits: 20
E-val: 9.00E-18
Sim: 95.95%
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XP_018924000.1 LOW QUALITY PROTEIN: nucleolar complex protein 2 homolog |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0042273P:ribosomal large subunit biogenesis GO:0003714F:transcription corepressor activity GO:0042393F:histone binding GO:0005654C:nucleoplasm GO:0005730C:nucleolus GO:0030690C:Noc1p-Noc2p complex GO:0030691C:Noc2p-Noc3p complex |
Transcription Regulation
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SRR953582_primary_scf7180002249470_1-1140
Len: 1,139 bp
Hits: 20
E-val: 1.90E-129
Sim: 94.09%
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XP_018963518.1 ETS domain-containing protein Elk-4-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030154P:cell differentiation GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002250039_60-536
Len: 476 bp
Hits: 20
E-val: 8.30E-66
Sim: 74.01%
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XP_018964756.1 zinc finger and BTB domain-containing protein 7B-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0010628P:positive regulation of gene expression GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
Transcription Regulation
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SRR953582_primary_scf7180002250049_1-1267
Len: 1,266 bp
Hits: 20
E-val: 3.90E-30
Sim: 99.74%
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XP_018952476.1 grainyhead-like protein 3 homolog, partial |
GO:0001843P:neural tube closure GO:0008544P:epidermis development GO:0010669P:epithelial structure maintenance GO:0030917P:midbrain-hindbrain boundary development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048703P:embryonic viscerocranium morphogenesis GO:0060325P:face morphogenesis GO:0071466P:cellular response to xenobiotic stimulus GO:0090504P:epiboly GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0003682F:chromatin binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002253285_1-671
Len: 670 bp
Hits: 20
E-val: 1.90E-31
Sim: 95.16%
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XP_018980162.1 homeobox protein Dlx5a-like |
GO:0001841P:neural tube formation GO:0006357P:regulation of transcription by RNA polymerase II GO:0009612P:response to mechanical stimulus GO:0021628P:olfactory nerve formation GO:0030154P:cell differentiation GO:0033339P:pectoral fin development GO:0035141P:medial fin morphogenesis GO:0048703P:embryonic viscerocranium morphogenesis GO:0051216P:cartilage development GO:0071699P:olfactory placode morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002254343_313-1255
Len: 942 bp
Hits: 20
E-val: 2.10E-97
Sim: 71.43%
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XP_018925679.1 transcription factor Spi-C-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030154P:cell differentiation GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002256860_1-1124
Len: 1,123 bp
Hits: 20
E-val: 2.00E-33
Sim: 51.99%
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XP_026104912.1DNA (cytosine-5)-methyltransferase 3A-like isoform X1 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0032259P:methylation GO:0003677F:DNA binding GO:0008168F:methyltransferase activity GO:0008270F:zinc ion binding GO:0051718F:DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates GO:0051719F:DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates GO:0051720F:DNA (cytosine-5-)-methyltransferase activity, acting on CpNpG substrates GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002261287_1-827
Len: 826 bp
Hits: 20
E-val: 2.00E-67
Sim: 94.66%
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XP_018958283.1 homeobox protein MSX-2-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0043049P:otic placode formation GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002263243_412-963
Len: 551 bp
Hits: 20
E-val: 8.20E-25
Sim: 95.78%
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XP_018937877.1 AT-rich interactive domain-containing protein 5A-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000976F:transcription cis-regulatory region binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002266637_196-943
Len: 747 bp
Hits: 20
E-val: 2.30E-22
Sim: 98.18%
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XP_026092704.1transcription factor CP2-like isoform X2 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002267782_1-1159
Len: 1,158 bp
Hits: 20
E-val: 1.60E-30
Sim: 63.31%
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XP_026132929.1probable JmjC domain-containing histone demethylation protein 2C isoform X3 |
GO:0006325P:chromatin organization GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0003712F:transcription coregulator activity GO:0008270F:zinc ion binding GO:0031490F:chromatin DNA binding GO:0032454F:histone H3K9 demethylase activity GO:0051213F:dioxygenase activity GO:0000118C:histone deacetylase complex GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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