Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924327_primary_scf7180002339508_1-720
Len: 719 bp
Hits: 20
E-val: 1.50E-42
Sim: 97.76%
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XP_016371370.1 forkhead box protein K2-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002339620_577-1011
Len: 434 bp
Hits: 20
E-val: 5.80E-66
Sim: 91.57%
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XP_018969802.1 homeobox protein MSH-C-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0043049P:otic placode formation GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002339651_48-609
Len: 561 bp
Hits: 6
E-val: 1.60E-07
Sim: 91.37%
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XP_024246507.1LOW QUALITY PROTEIN: nuclear pore complex protein Nup85 |
GO:0006406P:mRNA export from nucleus GO:0006606P:protein import into nucleus GO:0045893P:positive regulation of DNA-templated transcription GO:0017056F:structural constituent of nuclear pore GO:0031080C:nuclear pore outer ring GO:0031965C:nuclear membrane |
Transcription Regulation
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SRR924327_primary_scf7180002339704_1-1397
Len: 1,396 bp
Hits: 20
E-val: 1.30E-18
Sim: 86.86%
|
XP_022527628.1mediator of RNA polymerase II transcription subunit 12 |
GO:0001822P:kidney development GO:0002761P:regulation of myeloid leukocyte differentiation GO:0007492P:endoderm development GO:0007507P:heart development GO:0014032P:neural crest cell development GO:0021591P:ventricular system development GO:0021654P:rhombomere boundary formation GO:0021954P:central nervous system neuron development GO:0021982P:pineal gland development GO:0021986P:habenula development GO:0030901P:midbrain development GO:0035118P:embryonic pectoral fin morphogenesis GO:0043583P:ear development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048702P:embryonic neurocranium morphogenesis GO:0048703P:embryonic viscerocranium morphogenesis GO:0050935P:iridophore differentiation GO:0003700F:DNA-binding transcription factor activity GO:0003713F:transcription coactivator activity GO:0008013F:beta-catenin binding GO:0140585F:promoter-enhancer loop anchoring activity GO:0016592C:mediator complex |
Transcription Regulation
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SRR924327_primary_scf7180002341834_274-945
Len: 671 bp
Hits: 20
E-val: 4.70E-99
Sim: 85.87%
|
XP_018944013.1 homeobox protein cut-like 2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002343035_176-892
Len: 716 bp
Hits: 20
E-val: 2.00E-111
Sim: 93.02%
|
XP_018927739.1 inhibitor of growth protein 1-like isoform X1 |
GO:0006325P:chromatin organization GO:0045893P:positive regulation of DNA-templated transcription GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002344447_1-1056
Len: 1,055 bp
Hits: 20
E-val: 4.70E-21
Sim: 83.89%
|
CAG05643.1unnamed protein product |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002344700_471-1048
Len: 577 bp
Hits: 20
E-val: 1.00E-70
Sim: 94.19%
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XP_018939070.1 T-cell leukemia homeobox protein 1-like, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0048536P:spleen development GO:0050776P:regulation of immune response GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002345244_1-1162
Len: 1,161 bp
Hits: 20
E-val: 1.80E-53
Sim: 95.3%
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XP_016124765.1 transcription initiation factor TFIID subunit 5-like isoform X1 |
GO:0006367P:transcription initiation at RNA polymerase II promoter GO:0006413P:translational initiation GO:0003743F:translation initiation factor activity GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0000124C:SAGA complex GO:0005669C:transcription factor TFIID complex |
Transcription Regulation
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SRR924327_primary_scf7180002345265_1-1496
Len: 1,495 bp
Hits: 20
E-val: 2.60E-25
Sim: 90.08%
|
AWP19862.1Mediator of RNA polymerase II transcription subunit 23 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0010628P:positive regulation of gene expression GO:0005667C:transcription regulator complex GO:0016592C:mediator complex |
Transcription Regulation
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SRR924327_primary_scf7180002345305_1-1088
Len: 1,087 bp
Hits: 20
E-val: 2.90E-50
Sim: 56.01%
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RXN20067.1nucleosome-remodeling factor subunit BPTF-like protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0035064F:obsolete methylated histone binding GO:0005634C:nucleus GO:0016589C:NURF complex |
Transcription Regulation
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SRR924327_primary_scf7180002345833_64-576
Len: 512 bp
Hits: 20
E-val: 2.00E-86
Sim: 93.98%
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XP_018940656.1 homeobox protein Nkx-2.4-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0021854P:hypothalamus development GO:0030154P:cell differentiation GO:0030878P:thyroid gland development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0001046F:core promoter sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002345944_1-889
Len: 888 bp
Hits: 20
E-val: 3.10E-58
Sim: 75.59%
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XP_018928821.1 ETS translocation variant 5-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007346P:regulation of mitotic cell cycle GO:0008045P:motor neuron axon guidance GO:0021979P:hypothalamus cell differentiation GO:0035108P:limb morphogenesis GO:0045893P:positive regulation of DNA-templated transcription GO:0048793P:pronephros development GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002347846_1-570
Len: 569 bp
Hits: 20
E-val: 3.80E-17
Sim: 68.9%
|
XP_016141976.1 glucocorticoid modulatory element-binding protein 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0046872F:metal ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002355669_1-1087
Len: 1,086 bp
Hits: 20
E-val: 8.60E-135
Sim: 86.08%
|
XP_018939473.1 LOW QUALITY PROTEIN: PR domain zinc finger protein 4-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:1990226F:histone methyltransferase binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002359862_1-682
Len: 681 bp
Hits: 20
E-val: 6.60E-16
Sim: 97.45%
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XP_018960265.1 transcription elongation factor SPT4-like |
GO:0006355P:regulation of DNA-templated transcription GO:0006414P:translational elongation GO:0140673P:transcription elongation-coupled chromatin remodeling GO:0000993F:RNA polymerase II complex binding GO:0003746F:translation elongation factor activity GO:0008270F:zinc ion binding GO:0032044C:DSIF complex |
Transcription Regulation
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SRR924327_primary_scf7180002360272_159-758
Len: 599 bp
Hits: 20
E-val: 1.40E-86
Sim: 94.06%
|
XP_026097837.1transcriptional repressor protein YY1-like |
GO:0001525P:angiogenesis GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0007507P:heart development GO:0010628P:positive regulation of gene expression GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005515F:protein binding GO:0008270F:zinc ion binding GO:0000785C:chromatin GO:0005667C:transcription regulator complex GO:0031519C:PcG protein complex |
Transcription Regulation
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SRR924327_primary_scf7180002362698_1-1098
Len: 1,097 bp
Hits: 20
E-val: 3.20E-28
Sim: 98.44%
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XP_026108141.1host cell factor 1-like isoform X2 |
GO:0002062P:chondrocyte differentiation GO:0006338P:chromatin remodeling GO:0045893P:positive regulation of DNA-templated transcription GO:0048703P:embryonic viscerocranium morphogenesis GO:0003713F:transcription coactivator activity GO:0035097C:histone methyltransferase complex |
Transcription Regulation
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SRR924327_primary_scf7180002476286_1624-2076
Len: 452 bp
Hits: 20
E-val: 3.00E-65
Sim: 94.42%
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XP_026097241.1nuclear receptor coactivator 6-like isoform X2 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003713F:transcription coactivator activity GO:0005667C:transcription regulator complex GO:0035097C:histone methyltransferase complex |
Transcription Regulation
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SRR924327_primary_scf7180002476381_1-1069
Len: 1,068 bp
Hits: 20
E-val: 2.60E-51
Sim: 69.26%
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XP_018979866.1 cyclic AMP-dependent transcription factor ATF-6 beta-like isoform X1 |
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0110165C:cellular anatomical structure |
Transcription Regulation
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SRR924327_primary_scf7180002476828_1-904
Len: 903 bp
Hits: 20
E-val: 1.50E-44
Sim: 74.03%
|
XP_026142707.1GA-binding protein subunit beta-1 isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000976F:transcription cis-regulatory region binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002477104_1-1169
Len: 1,168 bp
Hits: 20
E-val: 1.70E-27
Sim: 86.44%
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XP_018965477.1 LOW QUALITY PROTEIN: DNA helicase INO80-like |
GO:0006281P:DNA repair GO:0006338P:chromatin remodeling GO:0006351P:DNA-templated transcription GO:0060255P:regulation of macromolecule metabolic process GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0042393F:histone binding GO:0140658F:ATP-dependent chromatin remodeler activity GO:0031011C:Ino80 complex |
Transcription Regulation
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SRR924327_primary_scf7180002477187_1-1267
Len: 1,266 bp
Hits: 20
E-val: 6.30E-113
Sim: 96.87%
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XP_018931334.1 forkhead box protein O1-A-like |
GO:0001945P:lymph vessel development GO:0006094P:gluconeogenesis GO:0006357P:regulation of transcription by RNA polymerase II GO:0048659P:smooth muscle cell proliferation GO:0048745P:smooth muscle tissue development GO:0051145P:smooth muscle cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924327_primary_scf7180002477479_1-1174
Len: 1,173 bp
Hits: 20
E-val: 4.60E-33
Sim: 97.83%
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XP_018920954.1 probable helicase with zinc finger domain |
GO:0006355P:regulation of DNA-templated transcription GO:0035194P:regulatory ncRNA-mediated post-transcriptional gene silencing GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0003723F:RNA binding GO:0004386F:helicase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0016787F:hydrolase activity GO:0005634C:nucleus GO:0005829C:cytosol GO:0043186C:P granule |
Transcription Regulation
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SRR924327_primary_scf7180002478228_339-1260
Len: 921 bp
Hits: 20
E-val: 1.30E-38
Sim: 90.82%
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XP_016146644.1 hepatic leukemia factor-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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