Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924327_primary_scf7180002478395_1-1038
Len: 1,037 bp
Hits: 20
E-val: 1.80E-36
Sim: 98.78%
|
XP_018967017.1 PHD finger protein 24-like |
GO:0006955P:immune response GO:0009966P:regulation of signal transduction GO:0045892P:negative regulation of DNA-templated transcription GO:0060326P:cell chemotaxis GO:0003714F:transcription corepressor activity GO:0005509F:calcium ion binding GO:0008009F:chemokine activity GO:0008048F:calcium sensitive guanylate cyclase activator activity GO:0008270F:zinc ion binding GO:0005615C:extracellular space GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924327_primary_scf7180002479426_1-1191
Len: 1,190 bp
Hits: 20
E-val: 6.50E-160
Sim: 99.19%
|
XP_016406635.1 zinc finger protein ZIC 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0021534P:cell proliferation in hindbrain GO:0021592P:fourth ventricle development GO:0048853P:forebrain morphogenesis GO:0060059P:embryonic retina morphogenesis in camera-type eye GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002479684_1-542
Len: 541 bp
Hits: 20
E-val: 4.20E-74
Sim: 89.43%
|
XP_018963619.1 homeobox protein Nkx-6.2 |
GO:0003309P:type B pancreatic cell differentiation GO:0003310P:pancreatic A cell differentiation GO:0006357P:regulation of transcription by RNA polymerase II GO:0021522P:spinal cord motor neuron differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002479997_1-1128
Len: 1,127 bp
Hits: 20
E-val: 3.70E-96
Sim: 89.27%
|
XP_018963518.1 ETS domain-containing protein Elk-4-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030154P:cell differentiation GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002480039_242-1138
Len: 896 bp
Hits: 20
E-val: 1.10E-159
Sim: 95.53%
|
XP_018967086.1 transcriptional activator protein Pur-beta |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0032422F:purine-rich negative regulatory element binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002480162_841-1218
Len: 377 bp
Hits: 20
E-val: 1.90E-57
Sim: 92.17%
|
XP_018976649.1 LOW QUALITY PROTEIN: laminin subunit gamma-1-like |
GO:0001654P:eye development GO:0006353P:DNA-templated transcription termination GO:0007519P:skeletal muscle tissue development GO:0007634P:optokinetic behavior GO:0031290P:retinal ganglion cell axon guidance GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048570P:notochord morphogenesis GO:0048854P:brain morphogenesis GO:0050684P:regulation of mRNA processing GO:0050908P:detection of light stimulus involved in visual perception GO:0061053P:somite development GO:0003724F:RNA helicase activity GO:0003725F:double-stranded RNA binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0033679F:3'-5' DNA/RNA helicase activity GO:0043138F:3'-5' DNA helicase activity GO:0005604C:basement membrane GO:0005730C:nucleolus GO:1990904C:ribonucleoprotein complex |
Transcription Regulation
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SRR924327_primary_scf7180002481142_1-778
Len: 777 bp
Hits: 20
E-val: 5.40E-30
Sim: 78.56%
|
XP_026098333.1transcription factor Sp4-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
Transcription Regulation
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SRR924327_primary_scf7180002481981_612-943
Len: 331 bp
Hits: 20
E-val: 1.50E-37
Sim: 98.39%
|
XP_016149279.1 hepatic leukemia factor-like |
GO:0035914P:skeletal muscle cell differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048511P:rhythmic process GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005515F:protein binding GO:0000785C:chromatin GO:0005654C:nucleoplasm GO:0090575C:RNA polymerase II transcription regulator complex |
Transcription Regulation
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SRR924327_primary_scf7180002482813_1-1008
Len: 1,007 bp
Hits: 20
E-val: 1.50E-77
Sim: 91.88%
|
XP_018975666.1 zinc finger protein 513-like isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002483631_1-860
Len: 859 bp
Hits: 20
E-val: 1.00E-13
Sim: 88.13%
|
XP_026073320.1histone deacetylase 4-like isoform X4 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0006325P:chromatin organization GO:0031078F:histone H3K14 deacetylase activity, hydrolytic mechanism GO:0032129F:histone H3K9 deacetylase activity, hydrolytic mechanism GO:0034739F:histone H4K16 deacetylase activity, hydrolytic mechanism GO:0046872F:metal ion binding GO:0140937F:histone H4K12 deacetylase activity, hydrolytic mechanism GO:0180032F:histone H4K5 deacetylase activity, hydrolytic mechanism GO:0180033F:histone H4K8 deacetylase activity, hydrolytic mechanism GO:1990162F:histone H3K4 deacetylase activity, hydrolytic mechanism GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002484857_287-1199
Len: 912 bp
Hits: 20
E-val: 6.70E-32
Sim: 85.65%
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XP_018962204.1 TOX high mobility group box family member 4-B-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0031490F:chromatin DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002487633_602-1448
Len: 846 bp
Hits: 20
E-val: 3.90E-26
Sim: 94.19%
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XP_016370202.1 neuronal pentraxin receptor-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003682F:chromatin binding GO:0000785C:chromatin GO:0035102C:PRC1 complex |
Transcription Regulation
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SRR924327_primary_scf7180002487773_277-543
Len: 266 bp
Hits: 20
E-val: 1.50E-40
Sim: 80.02%
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XP_018974560.1 LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 6 |
GO:0006383P:transcription by RNA polymerase III GO:0000127C:transcription factor TFIIIC complex |
Transcription Regulation
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SRR924327_primary_scf7180002711375_1-618
Len: 617 bp
Hits: 20
E-val: 2.10E-21
Sim: 51.77%
|
XP_016430068.1 actin-like protein 6B isoform X1 |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0003682F:chromatin binding GO:0016514C:SWI/SNF complex GO:0035267C:NuA4 histone acetyltransferase complex |
Transcription Regulation
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SRR924327_primary_scf7180002711447_290-838
Len: 548 bp
Hits: 20
E-val: 3.50E-84
Sim: 87.45%
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XP_016419914.1 transcription termination factor 2, mitochondrial-like |
GO:0006355P:regulation of DNA-templated transcription GO:0006393P:termination of mitochondrial transcription GO:0003690F:double-stranded DNA binding GO:0005759C:mitochondrial matrix |
Transcription Regulation
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SRR924330_primary_scf7180002815703_1-1652
Len: 1,651 bp
Hits: 20
E-val: 2.50E-178
Sim: 53.86%
|
BAC82611.1pol-like protein |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003714F:transcription corepressor activity GO:0003824F:catalytic activity |
Transcription Regulation
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SRR924330_primary_scf7180002817163_1-1037
Len: 1,036 bp
Hits: 20
E-val: 2.00E-32
Sim: 90.57%
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XP_018966786.1 RNA helicase Mov10l1-like |
GO:0035194P:regulatory ncRNA-mediated post-transcriptional gene silencing GO:0003723F:RNA binding GO:0004386F:helicase activity GO:0005829C:cytosol GO:0043186C:P granule |
Transcription Regulation
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SRR924330_primary_scf7180002820650_1-1769
Len: 1,768 bp
Hits: 20
E-val: 1.30E-79
Sim: 79.81%
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XP_026116390.1zinc finger protein 827-like isoform X2 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924330_primary_scf7180002820830_295-1415
Len: 1,120 bp
Hits: 20
E-val: 1.30E-21
Sim: 95%
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XP_018952080.1 failed axon connections homolog, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006813P:potassium ion transport GO:0006814P:sodium ion transport GO:0051726P:regulation of cell cycle GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005890C:sodium:potassium-exchanging ATPase complex |
Transcription Regulation
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SRR924330_primary_scf7180002821100_1-1240
Len: 1,239 bp
Hits: 20
E-val: 1.90E-53
Sim: 95.3%
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XP_016124765.1 transcription initiation factor TFIID subunit 5-like isoform X1 |
GO:0006367P:transcription initiation at RNA polymerase II promoter GO:0006413P:translational initiation GO:0003743F:translation initiation factor activity GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0000124C:SAGA complex GO:0005669C:transcription factor TFIID complex |
Transcription Regulation
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SRR924330_primary_scf7180002822196_25-834
Len: 809 bp
Hits: 20
E-val: 4.80E-98
Sim: 94.66%
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XP_016350248.1 DNA-binding protein RFX7-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific |
Transcription Regulation
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SRR924330_primary_scf7180002824035_1-1050
Len: 1,049 bp
Hits: 20
E-val: 2.60E-173
Sim: 90.91%
|
XP_018969810.1 zinc finger and BTB domain-containing protein 5-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0042030F:ATPase inhibitor activity GO:0051087F:protein-folding chaperone binding GO:0000785C:chromatin GO:0005667C:transcription regulator complex GO:0005765C:lysosomal membrane GO:0031519C:PcG protein complex |
Transcription Regulation
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SRR924330_primary_scf7180002824633_1-304
Len: 303 bp
Hits: 20
E-val: 8.50E-24
Sim: 91.33%
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XP_018921933.1 RING1 and YY1-binding protein A isoform X1 |
GO:0006915P:apoptotic process GO:0045893P:positive regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003712F:transcription coregulator activity GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924330_primary_scf7180002824965_531-1472
Len: 941 bp
Hits: 20
E-val: 1.30E-22
Sim: 98.53%
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XP_016325964.1 transcription initiation factor TFIID subunit 3-like |
GO:0006413P:translational initiation GO:0030097P:hemopoiesis GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048634P:regulation of muscle organ development GO:0000976F:transcription cis-regulatory region binding GO:0002039F:p53 binding GO:0003743F:translation initiation factor activity GO:0008270F:zinc ion binding GO:0046982F:protein heterodimerization activity GO:0005669C:transcription factor TFIID complex |
Transcription Regulation
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SRR924330_primary_scf7180002832040_202-1515
Len: 1,313 bp
Hits: 20
E-val: 3.00E-174
Sim: 95.65%
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XP_018930201.1 zinc finger and BTB domain-containing protein 14-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001817P:regulation of cytokine production GO:0002682P:regulation of immune system process GO:0006260P:DNA replication GO:0006265P:DNA topological change GO:0007059P:chromosome segregation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0003917F:DNA topoisomerase type I (single strand cut, ATP-independent) activity GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm GO:0005694C:chromosome GO:0005730C:nucleolus |
Transcription Regulation
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