Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924332_primary_scf7180002806995_1-852
Len: 851 bp
Hits: 20
E-val: 9.50E-81
Sim: 96.31%
|
XP_018930201.1 zinc finger and BTB domain-containing protein 14-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001817P:regulation of cytokine production GO:0002682P:regulation of immune system process GO:0006260P:DNA replication GO:0006265P:DNA topological change GO:0007059P:chromosome segregation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0003917F:DNA topoisomerase type I (single strand cut, ATP-independent) activity GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm GO:0005694C:chromosome GO:0005730C:nucleolus |
Transcription Regulation
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SRR924332_primary_scf7180002821988_1-1003
Len: 1,002 bp
Hits: 20
E-val: 2.90E-36
Sim: 88.52%
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XP_016116165.1 zinc finger protein 239-like, partial |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0032991C:protein-containing complex |
Transcription Regulation
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SRR924332_primary_scf7180002822205_23-676
Len: 653 bp
Hits: 20
E-val: 1.00E-82
Sim: 98.04%
|
XP_018960137.1 zinc finger protein 768-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924332_primary_scf7180002822236_1-934
Len: 933 bp
Hits: 20
E-val: 3.00E-96
Sim: 80.97%
|
XP_016130474.1 max-binding protein MNT-like |
GO:0000132P:establishment of mitotic spindle orientation GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0030154P:cell differentiation GO:0048312P:intracellular distribution of mitochondria GO:0051012P:microtubule sliding GO:0051301P:cell division GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003729F:mRNA binding GO:0046983F:protein dimerization activity GO:0070840F:dynein complex binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0005874C:microtubule GO:0005875C:microtubule associated complex |
Transcription Regulation
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SRR924332_primary_scf7180002822698_1-1504
Len: 1,503 bp
Hits: 20
E-val: 1.30E-96
Sim: 72.6%
|
XP_018971750.1 transducin-like enhancer protein 1 |
GO:0006355P:regulation of DNA-templated transcription GO:0048523P:negative regulation of cellular process |
Transcription Regulation
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SRR924332_primary_scf7180002827144_920-1259
Len: 339 bp
Hits: 20
E-val: 2.40E-19
Sim: 91.89%
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XP_018936910.1 LOW QUALITY PROTEIN: lysine-specific demethylase 5A-like |
GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0032259P:methylation GO:0003677F:DNA binding GO:0008168F:methyltransferase activity GO:0008270F:zinc ion binding GO:0034647F:histone H3K4me/H3K4me2/H3K4me3 demethylase activity GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR924332_primary_scf7180002887494_1-1094
Len: 1,093 bp
Hits: 20
E-val: 2.10E-19
Sim: 95.51%
|
XP_017537987.1 myelin transcription factor 1-like protein isoform X5 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0030154P:cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924332_primary_scf7180002887936_1-1094
Len: 1,093 bp
Hits: 20
E-val: 1.10E-28
Sim: 51.54%
|
XP_026100131.1FK506-binding protein 15-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003755F:peptidyl-prolyl cis-trans isomerase activity GO:0016853F:isomerase activity GO:0140839F:RNA polymerase II CTD heptapeptide repeat P3 isomerase activity GO:0140840F:RNA polymerase II CTD heptapeptide repeat P6 isomerase activity GO:0030426C:growth cone |
Transcription Regulation
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SRR924332_primary_scf7180002888609_219-1010
Len: 791 bp
Hits: 20
E-val: 7.00E-94
Sim: 64.86%
|
RXN10895.1putative transposase element L1Md-A101/L1Md-A102/L1Md-A2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924332_primary_scf7180003065565_1-392
Len: 391 bp
Hits: 20
E-val: 4.30E-68
Sim: 92.35%
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XP_018980326.1 LOW QUALITY PROTEIN: homeobox protein Hox-A13a-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0033333P:fin development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924332_primary_scf7180003067617_1-495
Len: 494 bp
Hits: 20
E-val: 2.00E-83
Sim: 92.12%
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XP_016087675.1 homeobox protein Hox-A10b isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924332_primary_scf7180003077399_1-744
Len: 743 bp
Hits: 20
E-val: 3.80E-17
Sim: 68.9%
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XP_016141976.1 glucocorticoid modulatory element-binding protein 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0046872F:metal ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924333_primary_scf7180001591357_131-1018
Len: 887 bp
Hits: 20
E-val: 5.40E-119
Sim: 69.7%
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RXN13360.1putative transposase element L1Md-A101/L1Md-A102/L1Md-A2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924333_primary_scf7180001594668_642-1481
Len: 839 bp
Hits: 20
E-val: 4.00E-132
Sim: 70.17%
|
RXN31867.1putative transposase element L1Md-A101/L1Md-A102/L1Md-A2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924334_primary_scf7180002196927_4368-4690
Len: 322 bp
Hits: 20
E-val: 1.70E-22
Sim: 68.3%
|
ROL47989.1LINE-1 retrotransposable element ORF1 protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924334_primary_scf7180002201676_1-418
Len: 417 bp
Hits: 20
E-val: 2.10E-41
Sim: 94.97%
|
XP_026055592.1early growth response protein 1-B-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924334_primary_scf7180002216835_1-518
Len: 517 bp
Hits: 20
E-val: 2.00E-89
Sim: 84.93%
|
XP_018975748.1 forkhead box protein E1 |
GO:0001755P:neural crest cell migration GO:0003419P:growth plate cartilage chondrocyte proliferation GO:0006357P:regulation of transcription by RNA polymerase II GO:0048703P:embryonic viscerocranium morphogenesis GO:0061035P:regulation of cartilage development GO:1903010P:regulation of bone development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002452721_218-1057
Len: 839 bp
Hits: 20
E-val: 1.50E-131
Sim: 70.18%
|
RXN31867.1putative transposase element L1Md-A101/L1Md-A102/L1Md-A2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002452727_527-2691
Len: 2,164 bp
Hits: 20
E-val: 1.10E-61
Sim: 85.36%
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XP_016117561.1 lysine-specific demethylase 5A-like, partial |
GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0032259P:methylation GO:0003677F:DNA binding GO:0008168F:methyltransferase activity GO:0008270F:zinc ion binding GO:0034647F:histone H3K4me/H3K4me2/H3K4me3 demethylase activity GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002454093_305-1129
Len: 824 bp
Hits: 20
E-val: 2.00E-83
Sim: 72.47%
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RXN17820.1LINE-1 type transposase domain-containing 1 |
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002454112_1-1525
Len: 1,524 bp
Hits: 20
E-val: 1.90E-26
Sim: 55.76%
|
XP_016311519.1 high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A-like |
GO:0006198P:cAMP catabolic process GO:0006355P:regulation of DNA-templated transcription GO:0007165P:signal transduction GO:0003723F:RNA binding GO:0004114F:3',5'-cyclic-nucleotide phosphodiesterase activity GO:0004115F:3',5'-cyclic-AMP phosphodiesterase activity GO:0016787F:hydrolase activity GO:0046872F:metal ion binding GO:0005634C:nucleus GO:0005886C:plasma membrane |
Transcription Regulation
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SRR924338_primary_scf7180002454241_361-3621
Len: 3,260 bp
Hits: 20
E-val: 0
Sim: 82.21%
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XP_026054992.1zinc fingers and homeoboxes protein 3-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002454690_1466-1978
Len: 512 bp
Hits: 20
E-val: 1.50E-25
Sim: 56.73%
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XP_019210515.1zinc finger BED domain-containing protein 1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009791P:post-embryonic development GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002455330_235-3115
Len: 2,880 bp
Hits: 20
E-val: 2.20E-36
Sim: 93.14%
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XP_018967726.1 max-interacting protein 1-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002455407_1-2433
Len: 2,432 bp
Hits: 20
E-val: 1.10E-36
Sim: 100%
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AAK55554.1transcription factor Meis2.2 |
GO:0001654P:eye development GO:0007420P:brain development GO:0008284P:positive regulation of cell population proliferation GO:0009880P:embryonic pattern specification GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048703P:embryonic viscerocranium morphogenesis GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0005634C:nucleus |
Transcription Regulation
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