Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924338_primary_scf7180002628971_1-900
Len: 899 bp
Hits: 20
E-val: 1.30E-19
Sim: 92.9%
|
XP_018973123.1 small G protein signaling modulator 2-like |
GO:0016567P:protein ubiquitination GO:0035024P:negative regulation of Rho protein signal transduction GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0051260P:protein homooligomerization GO:0004842F:ubiquitin-protein transferase activity GO:0005096F:GTPase activator activity GO:0005634C:nucleus GO:0005768C:endosome GO:0031463C:Cul3-RING ubiquitin ligase complex |
DNA Metabolism
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SRR924338_primary_scf7180002629018_584-988
Len: 404 bp
Hits: 20
E-val: 3.40E-28
Sim: 69.09%
|
XP_026054710.1transient receptor potential cation channel subfamily A member 1-like |
GO:0009593P:detection of chemical stimulus GO:0034220P:monoatomic ion transmembrane transport GO:0050974P:detection of mechanical stimulus involved in sensory perception GO:0008381F:mechanosensitive monoatomic ion channel activity GO:0015278F:intracellularly gated calcium channel activity GO:1902495C:transmembrane transporter complex |
Ion Transport
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SRR924338_primary_scf7180002629745_1-141
Len: 140 bp
Hits: 20
E-val: 4.00E-13
Sim: 99.88%
|
RXM91150.1Transcription elongation factor B polypeptide 2 |
GO:0006368P:transcription elongation by RNA polymerase II GO:0006414P:translational elongation GO:0003676F:nucleic acid binding GO:0003746F:translation elongation factor activity GO:0030891C:VCB complex GO:0070449C:elongin complex |
Transcription Regulation
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SRR924338_primary_scf7180002629966_1-953
Len: 952 bp
Hits: 20
E-val: 7.80E-15
Sim: 90.16%
|
XP_026112189.1non-canonical poly(A) RNA polymerase PAPD7-like isoform X1 |
GO:0031123P:RNA 3'-end processing GO:0043634P:polyadenylation-dependent ncRNA catabolic process GO:0003729F:mRNA binding GO:1990817F:poly(A) RNA polymerase activity GO:0005730C:nucleolus GO:0031499C:TRAMP complex |
DNA Metabolism
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SRR924338_primary_scf7180002632802_1-405
Len: 404 bp
Hits: 20
E-val: 8.40E-35
Sim: 99.92%
|
XP_018967381.1 LOW QUALITY PROTEIN: polypeptide N-acetylgalactosaminyltransferase 13-like |
GO:0006493P:protein O-linked glycosylation GO:0004653F:polypeptide N-acetylgalactosaminyltransferase activity GO:0030246F:carbohydrate binding GO:0000139C:Golgi membrane |
Other
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SRR924338_primary_scf7180002633270_692-974
Len: 282 bp
Hits: 20
E-val: 6.70E-31
Sim: 97.47%
|
XP_018945313.1 hepatic leukemia factor-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002633719_1-666
Len: 665 bp
Hits: 20
E-val: 4.90E-24
Sim: 100%
|
XP_026069412.1tyrosine-protein kinase JAK1 |
GO:0007259P:cell surface receptor signaling pathway via JAK-STAT GO:0019221P:cytokine-mediated signaling pathway GO:0030154P:cell differentiation GO:0035556P:intracellular signal transduction GO:0060397P:growth hormone receptor signaling pathway via JAK-STAT GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005131F:growth hormone receptor binding GO:0005524F:ATP binding GO:0005829C:cytosol GO:0005856C:cytoskeleton GO:0016020C:membrane |
Signal Transduction
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SRR924338_primary_scf7180002644373_210-998
Len: 788 bp
Hits: 20
E-val: 1.50E-67
Sim: 57.01%
|
XP_016370626.1 carnitine O-palmitoyltransferase 1, liver isoform-like isoform X1 |
GO:0008152P:metabolic process GO:0009617P:response to bacterium GO:0061959P:response to (R)-carnitine GO:0097009P:energy homeostasis |
Metabolism
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SRR924338_primary_scf7180002645980_1-499
Len: 498 bp
Hits: 20
E-val: 5.50E-28
Sim: 100%
|
RXN21408.1polypyrimidine tract-binding 3-like isoform X2 |
GO:0006397P:mRNA processing GO:0043484P:regulation of RNA splicing GO:0003729F:mRNA binding GO:0005634C:nucleus |
Other
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SRR924338_primary_scf7180002649642_35-828
Len: 793 bp
Hits: 20
E-val: 3.00E-20
Sim: 81.16%
|
XP_023997281.1KN motif and ankyrin repeat domain-containing protein 1-like |
GO:0030837P:negative regulation of actin filament polymerization GO:0005737C:cytoplasm GO:0005856C:cytoskeleton |
Other
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SRR924338_primary_scf7180002656659_1-950
Len: 949 bp
Hits: 20
E-val: 3.60E-105
Sim: 87.72%
|
XP_018951370.1 Hermansky-Pudlak syndrome 5 protein-like |
GO:0006590P:thyroid hormone generation GO:0006979P:response to oxidative stress GO:0030903P:notochord development GO:0042446P:hormone biosynthetic process GO:0042744P:hydrogen peroxide catabolic process GO:0048076P:regulation of compound eye pigmentation GO:0098869P:cellular oxidant detoxification GO:0004601F:peroxidase activity GO:0005509F:calcium ion binding GO:0005515F:protein binding GO:0016174F:NAD(P)H oxidase H2O2-forming activity GO:0020037F:heme binding GO:0005829C:cytosol GO:0016020C:membrane GO:0031084C:BLOC-2 complex |
Other
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SRR924338_primary_scf7180002656849_1-748
Len: 747 bp
Hits: 20
E-val: 3.20E-24
Sim: 91.47%
|
CAF97633.1unnamed protein product, partial |
GO:0006515P:protein quality control for misfolded or incompletely synthesized proteins GO:0007005P:mitochondrion organization GO:0009653P:anatomical structure morphogenesis GO:0051604P:protein maturation GO:0004176F:ATP-dependent peptidase activity GO:0004222F:metalloendopeptidase activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0005743C:mitochondrial inner membrane |
Protein Degradation
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SRR924338_primary_scf7180002767528_1-3618
Len: 3,617 bp
Hits: 20
E-val: 4.30E-21
Sim: 92.48%
|
XP_010883349.1kin of IRRE-like protein 2 isoform X2 |
GO:0007420P:brain development GO:0007520P:myoblast fusion GO:0032836P:glomerular basement membrane development GO:0039021P:pronephric glomerulus development GO:0039022P:pronephric duct development GO:0072015P:podocyte development GO:0098609P:cell-cell adhesion GO:0050839F:cell adhesion molecule binding GO:0005886C:plasma membrane GO:0005911C:cell-cell junction |
Other
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SRR924338_primary_scf7180002767555_243-2328
Len: 2,085 bp
Hits: 20
E-val: 5.20E-72
Sim: 74.72%
|
XP_016296125.1 cyclin-dependent kinase 13-like isoform X1 |
GO:0032968P:positive regulation of transcription elongation by RNA polymerase II GO:0005524F:ATP binding GO:0008353F:RNA polymerase II CTD heptapeptide repeat kinase activity GO:0030332F:cyclin binding GO:0008024C:cyclin/CDK positive transcription elongation factor complex |
Signal Transduction
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SRR924338_primary_scf7180002767602_1-1722
Len: 1,721 bp
Hits: 20
E-val: 5.20E-227
Sim: 74.12%
|
XP_018965673.1 LOW QUALITY PROTEIN: ribosomal protein S6 kinase delta-1-like |
GO:0004672F:protein kinase activity GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005524F:ATP binding GO:0035091F:phosphatidylinositol binding GO:0005769C:early endosome GO:0016020C:membrane |
Signal Transduction
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SRR924338_primary_scf7180002767676_27-2147
Len: 2,120 bp
Hits: 20
E-val: 1.50E-29
Sim: 94.51%
|
XP_026093087.1tyrosine-protein kinase TXK-like |
GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005524F:ATP binding |
Signal Transduction
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SRR924338_primary_scf7180002767682_1-1594
Len: 1,593 bp
Hits: 20
E-val: 4.20E-279
Sim: 97.33%
|
XP_018950380.1 LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 3-like |
GO:0030001P:metal ion transport GO:0051262P:protein tetramerization GO:0098655P:monoatomic cation transmembrane transport GO:0005261F:monoatomic cation channel activity GO:0005886C:plasma membrane |
Ion Transport
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SRR924338_primary_scf7180002767825_825-1929
Len: 1,104 bp
Hits: 20
E-val: 2.20E-162
Sim: 97.04%
|
XP_007236885.1RNA-binding protein Nova-1-like |
GO:0000381P:regulation of alternative mRNA splicing, via spliceosome GO:0003729F:mRNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Other
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SRR924338_primary_scf7180002767870_1-1444
Len: 1,443 bp
Hits: 20
E-val: 2.50E-158
Sim: 96.24%
|
XP_026101722.1metabotropic glutamate receptor 3-like isoform X1 |
GO:0007196P:adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway GO:0051966P:regulation of synaptic transmission, glutamatergic GO:0001641F:group II metabotropic glutamate receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR924338_primary_scf7180002767876_1-1767
Len: 1,766 bp
Hits: 20
E-val: 1.20E-40
Sim: 93.97%
|
XP_018948232.1 LOW QUALITY PROTEIN: metabotropic glutamate receptor 5 |
GO:0007196P:adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway GO:0007206P:phospholipase C-activating G protein-coupled glutamate receptor signaling pathway GO:0051966P:regulation of synaptic transmission, glutamatergic GO:0060078P:regulation of postsynaptic membrane potential GO:0099566P:regulation of postsynaptic cytosolic calcium ion concentration GO:0001640F:adenylate cyclase inhibiting G protein-coupled glutamate receptor activity GO:0099530F:G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential GO:0099583F:neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration GO:0098839C:postsynaptic density membrane |
Cell Signaling
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SRR924338_primary_scf7180002767905_425-1697
Len: 1,272 bp
Hits: 20
E-val: 2.40E-72
Sim: 84.91%
|
XP_018962838.1 potassium channel subfamily K member 3-like |
GO:0030322P:stabilization of membrane potential GO:0060047P:heart contraction GO:0071805P:potassium ion transmembrane transport GO:0005252F:open rectifier potassium channel activity GO:0015271F:outward rectifier potassium channel activity GO:0022841F:potassium ion leak channel activity GO:0005886C:plasma membrane |
Ion Transport
|
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SRR924338_primary_scf7180002767941_1-440
Len: 439 bp
Hits: 20
E-val: 3.30E-53
Sim: 98.97%
|
RXN26942.1crk |
GO:0007167P:enzyme-linked receptor protein signaling pathway GO:0007520P:myoblast fusion GO:0010842P:retina layer formation GO:0016477P:cell migration GO:0070374P:positive regulation of ERK1 and ERK2 cascade GO:0072114P:pronephros morphogenesis GO:2000145P:regulation of cell motility GO:0030971F:receptor tyrosine kinase binding GO:0035591F:signaling adaptor activity GO:0005737C:cytoplasm |
Signal Transduction
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SRR924338_primary_scf7180002767990_1-2321
Len: 2,320 bp
Hits: 20
E-val: 5.50E-272
Sim: 97.15%
|
XP_026079696.1B-cell lymphoma/leukemia 11A-like isoform X3 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:2000171P:negative regulation of dendrite development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002768066_1-695
Len: 694 bp
Hits: 20
E-val: 5.20E-08
Sim: 100%
|
XP_026135344.1THO complex subunit 2-like isoform X3 |
GO:0006397P:mRNA processing GO:0006406P:mRNA export from nucleus GO:0003729F:mRNA binding GO:0000445C:THO complex part of transcription export complex |
Transcription Regulation
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SRR924338_primary_scf7180002768195_412-1587
Len: 1,175 bp
Hits: 20
E-val: 3.60E-62
Sim: 95.25%
|
XP_016334227.1 low-density lipoprotein receptor-related protein 2-like, partial |
GO:0003094P:glomerular filtration GO:0007507P:heart development GO:0048259P:regulation of receptor-mediated endocytosis GO:0070293P:renal absorption GO:0005041F:low-density lipoprotein particle receptor activity GO:0005509F:calcium ion binding GO:0042562F:hormone binding GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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