Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR924340_primary_scf7180002424979_756-1636
Len: 880 bp
Hits: 20
E-val: 9.30E-55
Sim: 57.52%
|
XP_016366126.1 probable E3 ubiquitin-protein ligase HERC4 |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0004842F:ubiquitin-protein transferase activity GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm |
DNA Metabolism
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SRR924340_primary_scf7180002424991_780-1453
Len: 673 bp
Hits: 20
E-val: 1.00E-77
Sim: 93.88%
|
XP_018925785.1 NXPE family member 3-like |
GO:0007399P:nervous system development GO:0016020C:membrane |
Other
|
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SRR924340_primary_scf7180002426055_1-1068
Len: 1,067 bp
Hits: 20
E-val: 8.70E-23
Sim: 99.84%
|
XP_026140200.1integrin alpha-10-like |
GO:0007160P:cell-matrix adhesion GO:0007229P:integrin-mediated signaling pathway GO:0033627P:cell adhesion mediated by integrin GO:0098609P:cell-cell adhesion GO:0005178F:integrin binding GO:0046872F:metal ion binding GO:0008305C:integrin complex GO:0009897C:external side of plasma membrane |
Cell Signaling
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SRR924340_primary_scf7180002426828_89-1007
Len: 918 bp
Hits: 20
E-val: 5.70E-31
Sim: 86.95%
|
XP_018967345.1 somatolactin-like |
GO:0031667P:response to nutrient levels GO:0045927P:positive regulation of growth GO:0046427P:positive regulation of receptor signaling pathway via JAK-STAT GO:0048513P:animal organ development GO:0051877P:pigment granule aggregation in cell center GO:0060396P:growth hormone receptor signaling pathway GO:0005131F:growth hormone receptor binding GO:0070186F:growth hormone activity GO:0005615C:extracellular space |
Cell Signaling
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SRR924340_primary_scf7180002426919_1-1137
Len: 1,136 bp
Hits: 20
E-val: 6.70E-21
Sim: 96.83%
|
XP_016298434.1 receptor-type tyrosine-protein phosphatase delta-like |
GO:0006338P:chromatin remodeling GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0070593P:dendrite self-avoidance GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0098632F:cell-cell adhesion mediator activity GO:0140793F:histone H2AXY142 phosphatase activity GO:0005886C:plasma membrane GO:0030424C:axon |
DNA Metabolism
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SRR924340_primary_scf7180002426949_324-1310
Len: 986 bp
Hits: 20
E-val: 4.70E-180
Sim: 75.04%
|
XP_018976423.1 LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1B-like |
GO:0006338P:chromatin remodeling GO:0032259P:methylation GO:0003723F:RNA binding GO:0140999F:histone H3K4 trimethyltransferase activity GO:0048188C:Set1C/COMPASS complex |
DNA Metabolism
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SRR924340_primary_scf7180002427205_1-908
Len: 907 bp
Hits: 20
E-val: 4.00E-08
Sim: 98.9%
|
RXN15514.1chromosome-associated kinesin KIF4A |
GO:0007018P:microtubule-based movement GO:0007052P:mitotic spindle organization GO:0048731P:system development GO:0051231P:spindle elongation GO:0003777F:microtubule motor activity GO:0005524F:ATP binding GO:0008017F:microtubule binding GO:0005737C:cytoplasm GO:0005875C:microtubule associated complex |
Other
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SRR924340_primary_scf7180002427491_40-1245
Len: 1,205 bp
Hits: 20
E-val: 5.50E-66
Sim: 85.27%
|
XP_026138780.1LOW QUALITY PROTEIN: inner ear-specific collagen-like |
GO:0030020F:extracellular matrix structural constituent conferring tensile strength GO:0005581C:collagen trimer GO:0005615C:extracellular space GO:0016020C:membrane |
Other
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SRR924340_primary_scf7180002427601_1-726
Len: 725 bp
Hits: 20
E-val: 1.10E-93
Sim: 91.67%
|
XP_016420270.1 metabotropic glutamate receptor 2-like |
GO:0007196P:adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway GO:0051966P:regulation of synaptic transmission, glutamatergic GO:0001641F:group II metabotropic glutamate receptor activity GO:0003950F:NAD+ poly-ADP-ribosyltransferase activity GO:0016779F:nucleotidyltransferase activity GO:0005634C:nucleus GO:0005886C:plasma membrane |
Cell Signaling
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SRR924340_primary_scf7180002427785_1-825
Len: 824 bp
Hits: 20
E-val: 7.10E-49
Sim: 70.99%
|
XP_018938757.1 SHC SH2 domain-binding protein 1-like |
GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0005856C:cytoskeleton |
Cell Signaling
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SRR924340_primary_scf7180002428076_272-1348
Len: 1,076 bp
Hits: 20
E-val: 4.50E-184
Sim: 93.62%
|
XP_018942608.1 solute carrier family 52, riboflavin transporter, member 3-A |
GO:0032218P:riboflavin transport GO:0032217F:riboflavin transmembrane transporter activity GO:0005886C:plasma membrane |
Membrane Transport
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SRR924340_primary_scf7180002428699_97-1006
Len: 909 bp
Hits: 20
E-val: 1.50E-28
Sim: 100%
|
XP_026111408.1zinc finger protein basonuclin-2-like isoform X2 |
GO:0006356P:regulation of transcription by RNA polymerase I GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924340_primary_scf7180002428705_1-297
Len: 296 bp
Hits: 20
E-val: 3.50E-22
Sim: 98.93%
|
RXN17171.1cytoplasmic polyadenylation element-binding 1 isoform X3 |
GO:0031440P:regulation of mRNA 3'-end processing GO:0032869P:cellular response to insulin stimulus GO:0071230P:cellular response to amino acid stimulus GO:0071456P:cellular response to hypoxia GO:2000766P:negative regulation of cytoplasmic translation GO:0000900F:mRNA regulatory element binding translation repressor activity GO:0008135F:translation factor activity, RNA binding GO:0035925F:mRNA 3'-UTR AU-rich region binding GO:0042803F:protein homodimerization activity GO:0043022F:ribosome binding GO:0046872F:metal ion binding GO:0005634C:nucleus GO:0032991C:protein-containing complex GO:0036464C:cytoplasmic ribonucleoprotein granule GO:0043005C:neuron projection GO:0045202C:synapse |
Other
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SRR924340_primary_scf7180002429000_472-861
Len: 389 bp
Hits: 20
E-val: 1.50E-65
Sim: 89.74%
|
XP_018918525.1 retinal homeobox protein Rx3 |
GO:0001708P:cell fate specification GO:0001755P:neural crest cell migration GO:0021854P:hypothalamus development GO:0021984P:adenohypophysis development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0060041P:retina development in camera-type eye GO:0060898P:eye field cell fate commitment involved in camera-type eye formation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924340_primary_scf7180002431284_48-980
Len: 932 bp
Hits: 20
E-val: 1.90E-167
Sim: 92.45%
|
XP_018920998.1 LOW QUALITY PROTEIN: probable G-protein coupled receptor 88 |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0016020C:membrane |
Cell Signaling
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SRR924340_primary_scf7180002431374_1-924
Len: 923 bp
Hits: 20
E-val: 2.40E-130
Sim: 97.99%
|
XP_018966670.1 lysophosphatidic acid receptor 1-A-like isoform X1 |
GO:0001525P:angiogenesis GO:0001946P:lymphangiogenesis GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0019222P:regulation of metabolic process GO:0022008P:neurogenesis GO:0051216P:cartilage development GO:0060217P:hemangioblast cell differentiation GO:0070915F:lysophosphatidic acid receptor activity GO:0005768C:endosome GO:0005886C:plasma membrane GO:0009986C:cell surface |
Cell Signaling
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SRR924340_primary_scf7180002431902_1-941
Len: 940 bp
Hits: 20
E-val: 2.10E-20
Sim: 100%
|
XP_026076648.1adhesion G protein-coupled receptor L2-like isoform X3 |
GO:0007166P:cell surface receptor signaling pathway GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0030246F:carbohydrate binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR924340_primary_scf7180002432004_1-1051
Len: 1,050 bp
Hits: 20
E-val: 1.80E-97
Sim: 81.43%
|
XP_016348279.1 UDP-glucuronosyltransferase 2A1-like isoform X2 |
GO:0015020F:glucuronosyltransferase activity GO:0016020C:membrane |
Other
|
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SRR924340_primary_scf7180002432078_1-882
Len: 881 bp
Hits: 20
E-val: 8.40E-173
Sim: 98.35%
|
XP_026087729.1exostosin-1b-like |
GO:0015012P:heparan sulfate proteoglycan biosynthetic process GO:0046872F:metal ion binding GO:0050508F:glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity GO:0050509F:N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity GO:0005789C:endoplasmic reticulum membrane GO:0005794C:Golgi apparatus |
Other
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SRR924340_primary_scf7180002432578_1-549
Len: 548 bp
Hits: 20
E-val: 9.50E-74
Sim: 95.27%
|
XP_018979038.1 malonyl-CoA decarboxylase, mitochondrial-like |
GO:0006085P:acetyl-CoA biosynthetic process GO:0006633P:fatty acid biosynthetic process GO:2001294P:malonyl-CoA catabolic process GO:0050080F:malonyl-CoA decarboxylase activity GO:0005759C:mitochondrial matrix GO:0005782C:peroxisomal matrix |
Other
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SRR924340_primary_scf7180002444570_1-565
Len: 564 bp
Hits: 20
E-val: 6.60E-54
Sim: 76.27%
|
XP_018981435.1 DNA damage-binding protein 1-like |
GO:0006281P:DNA repair GO:0010564P:regulation of cell cycle process GO:0043066P:negative regulation of apoptotic process GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0005634C:nucleus GO:0035861C:site of double-strand break |
DNA Metabolism
|
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SRR924340_primary_scf7180002444643_1-797
Len: 796 bp
Hits: 20
E-val: 2.00E-32
Sim: 91.8%
|
XP_018928030.1 solute carrier family 22 member 5-like |
GO:0006783P:heme biosynthetic process GO:1902603P:carnitine transmembrane transport GO:0005524F:ATP binding GO:0015226F:carnitine transmembrane transporter activity GO:0005886C:plasma membrane |
Membrane Transport
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SRR924340_primary_scf7180002444690_830-1553
Len: 723 bp
Hits: 20
E-val: 2.10E-12
Sim: 99.78%
|
XP_026112690.160S ribosomal protein L24 |
GO:0002181P:cytoplasmic translation GO:0003729F:mRNA binding GO:0003735F:structural constituent of ribosome GO:0022625C:cytosolic large ribosomal subunit |
Other
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SRR924340_primary_scf7180002444780_1-1104
Len: 1,103 bp
Hits: 20
E-val: 6.00E-43
Sim: 73.35%
|
XP_016134842.1 transcription factor E2F7 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001946P:lymphangiogenesis GO:0002040P:sprouting angiogenesis GO:0008045P:motor neuron axon guidance GO:0030330P:DNA damage response, signal transduction by p53 class mediator GO:0032466P:negative regulation of cytokinesis GO:0032877P:positive regulation of DNA endoreduplication GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0060718P:chorionic trophoblast cell differentiation GO:0070365P:hepatocyte differentiation GO:2000134P:negative regulation of G1/S transition of mitotic cell cycle GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0001217F:DNA-binding transcription repressor activity GO:0005515F:protein binding GO:0090575C:RNA polymerase II transcription regulator complex |
Transcription Regulation
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SRR924340_primary_scf7180002444788_1-1080
Len: 1,079 bp
Hits: 20
E-val: 1.30E-79
Sim: 87.32%
|
XP_016112537.1 potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3-like |
GO:0003254P:regulation of membrane depolarization GO:0035725P:sodium ion transmembrane transport GO:0071805P:potassium ion transmembrane transport GO:0005249F:voltage-gated potassium channel activity GO:0005272F:sodium channel activity GO:0030552F:cAMP binding GO:0030424C:axon GO:0030425C:dendrite GO:0098855C:HCN channel complex |
Ion Transport
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