Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR924681_primary_scf7180003497376_334-1380
Len: 1,046 bp
Hits: 20
E-val: 3.10E-49
Sim: 63.4%
|
XP_018927077.1 E3 ubiquitin-protein ligase RBBP6-like isoform X1 |
GO:0006397P:mRNA processing GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0003676F:nucleic acid binding GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus |
DNA Metabolism
|
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SRR924681_primary_scf7180003497394_347-825
Len: 478 bp
Hits: 20
E-val: 2.50E-54
Sim: 99.03%
|
XP_018921234.1 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3-like |
GO:0005975P:carbohydrate metabolic process GO:0015012P:heparan sulfate proteoglycan biosynthetic process GO:0030198P:extracellular matrix organization GO:0050650P:chondroitin sulfate proteoglycan biosynthetic process GO:0051216P:cartilage development GO:0015018F:galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GO:0046872F:metal ion binding GO:0000139C:Golgi membrane |
Metabolism
|
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SRR924681_primary_scf7180003497567_458-926
Len: 468 bp
Hits: 20
E-val: 3.20E-30
Sim: 98.48%
|
XP_018963888.1 nuclear transcription factor Y subunit alpha-like isoform X1 |
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0016602C:CCAAT-binding factor complex |
Transcription Regulation
|
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SRR924681_primary_scf7180003497575_200-1502
Len: 1,302 bp
Hits: 20
E-val: 1.80E-54
Sim: 52.74%
|
XP_018979052.1 transient receptor potential cation channel subfamily V member 1-like |
GO:0098703P:calcium ion import across plasma membrane GO:0005262F:calcium channel activity GO:0005886C:plasma membrane |
Ion Transport
|
|
SRR924681_primary_scf7180003497581_156-954
Len: 798 bp
Hits: 20
E-val: 3.00E-36
Sim: 67.71%
|
RXN39402.1phosphorylase b kinase regulatory subunit skeletal muscle isoform-like protein |
GO:0005977P:glycogen metabolic process GO:0005516F:calmodulin binding GO:0005886C:plasma membrane GO:0005964C:phosphorylase kinase complex |
Signal Transduction
|
|
SRR924681_primary_scf7180003497818_192-1185
Len: 993 bp
Hits: 20
E-val: 1.90E-27
Sim: 88.98%
|
XP_018932475.1 vitelline membrane outer layer protein 1-like |
GO:0005615C:extracellular space GO:0016020C:membrane |
Other
|
|
SRR924681_primary_scf7180003497878_511-1729
Len: 1,218 bp
Hits: 20
E-val: 1.70E-38
Sim: 77.02%
|
XP_018927348.1 cytochrome b reductase 1 |
GO:0016567P:protein ubiquitination GO:0055085P:transmembrane transport GO:0060586P:multicellular organismal-level iron ion homeostasis GO:0140576P:ascorbate homeostasis GO:0042802F:identical protein binding GO:0046872F:metal ion binding GO:0140571F:transmembrane ascorbate ferrireductase activity GO:0140575F:transmembrane monodehydroascorbate reductase activity GO:0005765C:lysosomal membrane GO:0031526C:brush border membrane GO:0080008C:Cul4-RING E3 ubiquitin ligase complex |
Membrane Transport
|
|
SRR924681_primary_scf7180003497881_474-1240
Len: 766 bp
Hits: 20
E-val: 3.40E-53
Sim: 94.03%
|
XP_018935559.1 fer-1-like protein 6 |
GO:0007009P:plasma membrane organization GO:0036211P:protein modification process GO:0046872F:metal ion binding GO:0016020C:membrane |
Other
|
|
SRR924681_primary_scf7180003497931_1-1085
Len: 1,084 bp
Hits: 20
E-val: 1.70E-13
Sim: 98.42%
|
XP_018935677.1 RNA-directed DNA polymerase from mobile element jockey-like |
GO:0035035F:histone acetyltransferase binding GO:0043231C:intracellular membrane-bounded organelle GO:0044545C:NSL complex |
Other
|
|
SRR924681_primary_scf7180003498029_1-1310
Len: 1,309 bp
Hits: 20
E-val: 2.40E-62
Sim: 93.17%
|
XP_016380104.1 brevican core protein-like isoform X1 |
GO:0001501P:skeletal system development GO:0002052P:positive regulation of neuroblast proliferation GO:0007155P:cell adhesion GO:0007417P:central nervous system development GO:0010001P:glial cell differentiation GO:0000175F:3'-5'-RNA exonuclease activity GO:0003676F:nucleic acid binding GO:0005540F:hyaluronic acid binding GO:0030246F:carbohydrate binding GO:0005615C:extracellular space GO:0045202C:synapse GO:0072534C:perineuronal net |
DNA Metabolism
|
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SRR924681_primary_scf7180003498071_1-1012
Len: 1,011 bp
Hits: 20
E-val: 1.00E-169
Sim: 90.95%
|
XP_018970048.1 PWWP domain-containing protein 2B-like isoform X1 |
DNA Metabolism
|
|
|
SRR924681_primary_scf7180003498080_722-2097
Len: 1,375 bp
Hits: 20
E-val: 4.70E-53
Sim: 96.9%
|
XP_016304269.1 polymeric immunoglobulin receptor-like |
GO:0004888F:transmembrane signaling receptor activity GO:0005886C:plasma membrane |
Cell Signaling
|
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SRR924681_primary_scf7180003498081_1-571
Len: 570 bp
Hits: 20
E-val: 6.30E-36
Sim: 68.2%
|
NP_571830.1sodium-dependent dopamine transporter |
GO:0006865P:amino acid transport GO:0035725P:sodium ion transmembrane transport GO:0005886C:plasma membrane |
Membrane Transport
|
|
SRR924681_primary_scf7180003498095_1-486
Len: 485 bp
Hits: 20
E-val: 1.90E-17
Sim: 82.97%
|
XP_018921190.1 chloride channel protein ClC-Kb-like |
GO:0055064P:chloride ion homeostasis GO:1902476P:chloride transmembrane transport GO:0005247F:voltage-gated chloride channel activity GO:0005886C:plasma membrane GO:0034707C:chloride channel complex |
Ion Transport
|
|
SRR924681_primary_scf7180003498231_1-529
Len: 528 bp
Hits: 20
E-val: 6.20E-46
Sim: 51.45%
|
XP_018967244.1 C-type lectin domain family 4 member E-like |
GO:0030246F:carbohydrate binding GO:0016020C:membrane |
Other
|
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SRR924681_primary_scf7180003498777_126-740
Len: 614 bp
Hits: 20
E-val: 1.10E-81
Sim: 75.85%
|
ROI16187.1Transposon Tf2-6 polyprotein |
GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0016020C:membrane |
Protein Degradation
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|
SRR924681_primary_scf7180003498825_1-3589
Len: 3,588 bp
Hits: 20
E-val: 1.50E-71
Sim: 70.19%
|
XP_018959615.1 microtubule-associated serine/threonine-protein kinase 1-like |
GO:0016043P:cellular component organization GO:0004674F:protein serine/threonine kinase activity GO:0043167F:ion binding GO:0140995F:histone H2A kinase activity GO:0140996F:histone H3 kinase activity GO:0140998F:histone H2B kinase activity GO:0110165C:cellular anatomical structure |
Signal Transduction
|
|
SRR924681_primary_scf7180003498856_1-3378
Len: 3,377 bp
Hits: 20
E-val: 1.90E-55
Sim: 91.79%
|
XP_018939481.1 GRB2-associated-binding protein 1-like isoform X1 |
Cell Signaling
|
|
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SRR924681_primary_scf7180003498951_1-1674
Len: 1,673 bp
Hits: 20
E-val: 1.10E-24
Sim: 99.12%
|
XP_026073804.1interleukin-1 receptor accessory protein-like 1-A isoform X1 |
GO:0019221P:cytokine-mediated signaling pathway GO:0045920P:negative regulation of exocytosis GO:0004908F:interleukin-1 receptor activity GO:0061809F:NAD+ nucleosidase activity, cyclic ADP-ribose generating GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0009986C:cell surface |
Cell Signaling
|
|
SRR924681_primary_scf7180003498982_112-781
Len: 669 bp
Hits: 20
E-val: 2.90E-48
Sim: 74.85%
|
XP_018973478.1 hemoglobin subunit beta |
GO:0009987P:cellular process GO:0036094F:small molecule binding GO:0032991C:protein-containing complex GO:0110165C:cellular anatomical structure |
Other
|
|
SRR924681_primary_scf7180003498989_1-1605
Len: 1,604 bp
Hits: 20
E-val: 3.10E-32
Sim: 70%
|
XP_026112215.1cytoplasmic dynein 1 intermediate chain 2-like isoform X2 |
GO:0007018P:microtubule-based movement GO:0010970P:transport along microtubule GO:0045503F:dynein light chain binding GO:0045504F:dynein heavy chain binding GO:0005856C:cytoskeleton GO:0005868C:cytoplasmic dynein complex |
Other
|
|
SRR924681_primary_scf7180003498990_1-1838
Len: 1,837 bp
Hits: 20
E-val: 8.50E-42
Sim: 70.54%
|
XP_018976812.1 protein FAM149B1-like isoform X1 |
GO:0060271P:cilium assembly GO:0061512P:protein localization to cilium |
Other
|
|
SRR924681_primary_scf7180003499046_1-1160
Len: 1,159 bp
Hits: 20
E-val: 4.70E-62
Sim: 81.38%
|
XP_018927651.1 LOW QUALITY PROTEIN: putative homeodomain transcription factor 2, partial |
GO:0005783C:endoplasmic reticulum GO:0016020C:membrane |
Other
|
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SRR924681_primary_scf7180003499059_1-1952
Len: 1,951 bp
Hits: 20
E-val: 9.90E-65
Sim: 51.5%
|
XP_018943287.1 LOW QUALITY PROTEIN: alpha-mannosidase 2C1-like |
GO:0006013P:mannose metabolic process GO:0009313P:oligosaccharide catabolic process GO:0004559F:alpha-mannosidase activity GO:0016798F:hydrolase activity, acting on glycosyl bonds GO:0030246F:carbohydrate binding GO:0046872F:metal ion binding |
Metabolism
|
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SRR924681_primary_scf7180003499161_1208-1566
Len: 358 bp
Hits: 20
E-val: 1.80E-12
Sim: 93.33%
|
ROL49109.1Nuclear receptor corepressor 2 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0030223P:neutrophil differentiation GO:0030225P:macrophage differentiation GO:0060218P:hematopoietic stem cell differentiation GO:0003714F:transcription corepressor activity GO:0000785C:chromatin GO:0005654C:nucleoplasm GO:0032991C:protein-containing complex |
Transcription Regulation
|