Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924681_primary_scf7180003514383_539-1324
Len: 785 bp
Hits: 20
E-val: 3.20E-139
Sim: 95.68%
|
XP_018975687.1 voltage-dependent calcium channel gamma-4 subunit-like |
GO:0019226P:transmission of nerve impulse GO:0051968P:positive regulation of synaptic transmission, glutamatergic GO:0070588P:calcium ion transmembrane transport GO:0098943P:neurotransmitter receptor transport, postsynaptic endosome to lysosome GO:0098970P:postsynaptic neurotransmitter receptor diffusion trapping GO:0099590P:neurotransmitter receptor internalization GO:0005245F:voltage-gated calcium channel activity GO:0016247F:channel regulator activity GO:0032281C:AMPA glutamate receptor complex GO:0098839C:postsynaptic density membrane |
Cell Signaling
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SRR924681_primary_scf7180003514500_1-1229
Len: 1,228 bp
Hits: 20
E-val: 1.00E-115
Sim: 90.68%
|
XP_026139945.1E3 ubiquitin-protein ligase TRIM71-like |
GO:0000082P:G1/S transition of mitotic cell cycle GO:0000209P:protein polyubiquitination GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0010172P:embryonic body morphogenesis GO:0021915P:neural tube development GO:0035278P:miRNA-mediated gene silencing by inhibition of translation GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0051865P:protein autoubiquitination GO:0072089P:stem cell proliferation GO:2000177P:regulation of neural precursor cell proliferation GO:0008270F:zinc ion binding GO:0035198F:miRNA binding GO:0061630F:ubiquitin protein ligase activity GO:0000932C:P-body |
Cell Signaling
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SRR924681_primary_scf7180003514534_713-1496
Len: 783 bp
Hits: 20
E-val: 9.60E-136
Sim: 96.26%
|
XP_018946442.1 immediate early response gene 5-like protein |
Other
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|
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SRR924681_primary_scf7180003514607_1-2052
Len: 2,051 bp
Hits: 20
E-val: 7.00E-37
Sim: 70.84%
|
XP_026117347.1paired box protein Pax-2a isoform X28 |
GO:0006355P:regulation of DNA-templated transcription GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003514668_1-1562
Len: 1,561 bp
Hits: 20
E-val: 6.70E-72
Sim: 60.28%
|
XP_018924028.1 LOW QUALITY PROTEIN: filamin-C-like |
GO:0007626P:locomotory behavior GO:0046716P:muscle cell cellular homeostasis |
Other
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SRR924681_primary_scf7180003514741_1-1419
Len: 1,418 bp
Hits: 20
E-val: 1.20E-213
Sim: 99.19%
|
RXN07212.1netrin-1-like isoform X1 |
GO:0001569P:branching involved in blood vessel morphogenesis GO:0001947P:heart looping GO:0003146P:heart jogging GO:0008045P:motor neuron axon guidance GO:0016358P:dendrite development GO:0016525P:negative regulation of angiogenesis GO:0021960P:anterior commissure morphogenesis GO:0030516P:regulation of axon extension GO:0030878P:thyroid gland development GO:0033564P:anterior/posterior axon guidance GO:0035908P:ventral aorta development GO:0048665P:neuron fate specification GO:0048846P:axon extension involved in axon guidance GO:0061386P:closure of optic fissure GO:0061626P:pharyngeal arch artery morphogenesis GO:0071678P:olfactory bulb axon guidance GO:0005515F:protein binding GO:0005576C:extracellular region GO:0005604C:basement membrane GO:0005737C:cytoplasm |
Other
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SRR924681_primary_scf7180003514754_268-781
Len: 513 bp
Hits: 20
E-val: 1.20E-46
Sim: 87.17%
|
XP_018947878.1 type I iodothyronine deiodinase-like isoform X2 |
GO:0042403P:thyroid hormone metabolic process GO:0042446P:hormone biosynthetic process GO:0061074P:regulation of neural retina development GO:0004800F:thyroxine 5'-deiodinase activity GO:0016020C:membrane |
Metabolism
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SRR924681_primary_scf7180003514900_76-1059
Len: 983 bp
Hits: 20
E-val: 1.10E-173
Sim: 89.82%
|
XP_016412076.1 olfactory receptor 2AT4-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0050911P:detection of chemical stimulus involved in sensory perception of smell GO:0004930F:G protein-coupled receptor activity GO:0004984F:olfactory receptor activity GO:0005549F:odorant binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR924681_primary_scf7180003514906_1-2024
Len: 2,023 bp
Hits: 20
E-val: 5.10E-32
Sim: 89.56%
|
XP_016141680.1 voltage-dependent N-type calcium channel subunit alpha-1B-like |
GO:0007268P:chemical synaptic transmission GO:0098703P:calcium ion import across plasma membrane GO:0005509F:calcium ion binding GO:0008331F:high voltage-gated calcium channel activity GO:0005891C:voltage-gated calcium channel complex GO:0043025C:neuronal cell body GO:0045202C:synapse |
Ion Transport
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SRR924681_primary_scf7180003514980_1-343
Len: 342 bp
Hits: 20
E-val: 5.10E-25
Sim: 100%
|
XP_003973218.1 protein transport protein Sec61 subunit alpha isoform 1 |
GO:0006616P:SRP-dependent cotranslational protein targeting to membrane, translocation GO:0021986P:habenula development GO:0031204P:post-translational protein targeting to membrane, translocation GO:0039019P:pronephric nephron development GO:0045048P:protein insertion into ER membrane GO:0005048F:signal sequence binding GO:0008320F:protein transmembrane transporter activity GO:0043022F:ribosome binding GO:0005784C:Sec61 translocon complex |
Membrane Transport
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SRR924681_primary_scf7180003514998_1-526
Len: 525 bp
Hits: 20
E-val: 1.40E-18
Sim: 95.77%
|
ROL51208.1Reelin |
GO:0001764P:neuron migration GO:0006508P:proteolysis GO:0007155P:cell adhesion GO:0007417P:central nervous system development GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0008236F:serine-type peptidase activity GO:0046872F:metal ion binding GO:0070325F:lipoprotein particle receptor binding GO:0005615C:extracellular space GO:0043005C:neuron projection |
Cell Signaling
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SRR924681_primary_scf7180003515156_576-1048
Len: 472 bp
Hits: 20
E-val: 2.40E-09
Sim: 98.61%
|
XP_026083198.1GON-4-like protein |
GO:0006355P:regulation of DNA-templated transcription GO:0003712F:transcription coregulator activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003515195_1-1907
Len: 1,906 bp
Hits: 20
E-val: 0
Sim: 98.79%
|
XP_016375221.1 kelch-like protein 25 isoform X1 |
GO:0006417P:regulation of translation GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0005737C:cytoplasm GO:0031463C:Cul3-RING ubiquitin ligase complex |
DNA Metabolism
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SRR924681_primary_scf7180003515226_225-1121
Len: 896 bp
Hits: 20
E-val: 1.60E-25
Sim: 98.73%
|
XP_018968657.1 nucleoprotein TPR-like |
GO:0006406P:mRNA export from nucleus GO:0006606P:protein import into nucleus GO:1901673P:regulation of mitotic spindle assembly GO:0017056F:structural constituent of nuclear pore GO:0005643C:nuclear pore |
Other
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SRR924681_primary_scf7180003515274_613-1371
Len: 758 bp
Hits: 20
E-val: 9.10E-59
Sim: 66.21%
|
ROJ29302.1Stathmin |
GO:0016043P:cellular component organization GO:0005622C:intracellular anatomical structure |
Other
|
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SRR924681_primary_scf7180003515300_1-1528
Len: 1,527 bp
Hits: 20
E-val: 5.40E-26
Sim: 69.91%
|
XP_026116079.1NSFL1 cofactor p47-like |
GO:0006996P:organelle organization GO:0005488F:binding GO:0005737C:cytoplasm GO:0043231C:intracellular membrane-bounded organelle |
Other
|
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SRR924681_primary_scf7180003515319_1-1807
Len: 1,806 bp
Hits: 20
E-val: 3.30E-30
Sim: 82.92%
|
XP_016131081.1 centriolin-like |
GO:0007076P:mitotic chromosome condensation GO:0003682F:chromatin binding GO:0000785C:chromatin GO:0000793C:condensed chromosome GO:0000796C:condensin complex |
DNA Metabolism
|
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SRR924681_primary_scf7180003515339_1-1408
Len: 1,407 bp
Hits: 20
E-val: 3.40E-22
Sim: 87.13%
|
ROI15858.1Glutamate receptor 3 |
GO:0034220P:monoatomic ion transmembrane transport GO:0015276F:ligand-gated monoatomic ion channel activity GO:0038023F:signaling receptor activity GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR924681_primary_scf7180003515359_1-1933
Len: 1,932 bp
Hits: 20
E-val: 1.50E-259
Sim: 94.48%
|
XP_018919256.1 LOW QUALITY PROTEIN: protein Shroom3-like |
GO:0007015P:actin filament organization GO:0048919P:posterior lateral line neuromast development GO:0072015P:podocyte development GO:0051015F:actin filament binding GO:0005874C:microtubule GO:0005912C:adherens junction GO:0016324C:apical plasma membrane GO:0030864C:cortical actin cytoskeleton GO:0043296C:apical junction complex |
Other
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SRR924681_primary_scf7180003515380_1-1445
Len: 1,444 bp
Hits: 20
E-val: 7.40E-09
Sim: 88.78%
|
XP_026027146.1lipopolysaccharide-responsive and beige-like anchor protein isoform X1 |
GO:0008104P:intracellular protein localization GO:0019901F:protein kinase binding GO:0005829C:cytosol GO:0016020C:membrane |
Signal Transduction
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SRR924681_primary_scf7180003515495_1-1621
Len: 1,620 bp
Hits: 20
E-val: 3.50E-124
Sim: 63.52%
|
XP_026127093.1titin isoform X9 |
Signal Transduction
|
|
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SRR924681_primary_scf7180003515534_1-1258
Len: 1,257 bp
Hits: 20
E-val: 4.30E-37
Sim: 53.14%
|
XP_016307925.1 rho GTPase-activating protein 27-like |
Other
|
|
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SRR924681_primary_scf7180003515583_745-1046
Len: 301 bp
Hits: 20
E-val: 2.00E-25
Sim: 95.48%
|
XP_018941169.1 WW domain-containing transcription regulator protein 1-like |
GO:0001501P:skeletal system development GO:0001570P:vasculogenesis GO:0003222P:ventricular trabecula myocardium morphogenesis GO:0003406P:retinal pigment epithelium development GO:0007155P:cell adhesion GO:0030509P:BMP signaling pathway GO:0034672P:anterior/posterior pattern specification involved in pronephros development GO:0035329P:hippo signaling GO:0045892P:negative regulation of DNA-templated transcription GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0046844P:chorion micropyle formation GO:0048387P:negative regulation of retinoic acid receptor signaling pathway GO:0048566P:embryonic digestive tract development GO:0060271P:cilium assembly GO:0061371P:determination of heart left/right asymmetry GO:0070121P:Kupffer's vesicle development GO:0072148P:epithelial cell fate commitment GO:1905590P:fibronectin fibril organization GO:0003713F:transcription coactivator activity GO:0003714F:transcription corepressor activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005923C:bicellular tight junction |
Cell Signaling
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SRR924681_primary_scf7180003515865_979-1788
Len: 809 bp
Hits: 20
E-val: 1.20E-19
Sim: 96.4%
|
XP_018951274.1 zinc finger protein 239-like isoform X3 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0000785C:chromatin GO:0005667C:transcription regulator complex GO:0031519C:PcG protein complex |
Transcription Regulation
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SRR924681_primary_scf7180003515901_1-1653
Len: 1,652 bp
Hits: 20
E-val: 9.00E-51
Sim: 50.39%
|
XP_016422172.1 polycomb protein eed-like |
GO:0006825P:copper ion transport GO:0035434P:copper ion transmembrane transport GO:0055070P:copper ion homeostasis GO:0005507F:copper ion binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0043682F:P-type divalent copper transporter activity GO:0046872F:metal ion binding GO:0140581F:P-type monovalent copper transporter activity GO:0005794C:Golgi apparatus GO:0005802C:trans-Golgi network GO:0016020C:membrane |
Ion Transport
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