Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924681_primary_scf7180003515952_20-1711
Len: 1,691 bp
Hits: 20
E-val: 2.30E-182
Sim: 84.91%
|
XP_016146935.1 neuronal acetylcholine receptor subunit alpha-3-like |
GO:0007271P:synaptic transmission, cholinergic GO:0007274P:neuromuscular synaptic transmission GO:0034220P:monoatomic ion transmembrane transport GO:0035094P:response to nicotine GO:0051899P:membrane depolarization GO:0060079P:excitatory postsynaptic potential GO:0095500P:acetylcholine receptor signaling pathway GO:0015464F:acetylcholine receptor activity GO:0022848F:acetylcholine-gated monoatomic cation-selective channel activity GO:0005892C:acetylcholine-gated channel complex GO:0043005C:neuron projection GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR924681_primary_scf7180003516086_1-1625
Len: 1,624 bp
Hits: 20
E-val: 2.80E-73
Sim: 92.19%
|
XP_018957561.1 LOW QUALITY PROTEIN: G-protein coupled receptor 161-like |
GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0007368P:determination of left/right symmetry GO:0051924P:regulation of calcium ion transport GO:1901621P:negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning GO:0004930F:G protein-coupled receptor activity GO:0055037C:recycling endosome GO:0060170C:ciliary membrane |
Cell Signaling
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SRR924681_primary_scf7180003516096_1-1328
Len: 1,327 bp
Hits: 20
E-val: 2.80E-34
Sim: 98.19%
|
XP_016147939.1 chondroitin sulfate proteoglycan 5-like |
GO:0048858P:cell projection morphogenesis GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle GO:0045202C:synapse |
Other
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SRR924681_primary_scf7180003516100_1-717
Len: 716 bp
Hits: 20
E-val: 2.30E-19
Sim: 91.54%
|
XP_018939264.1 RNA-binding protein with multiple splicing-like |
GO:0007052P:mitotic spindle organization GO:0003723F:RNA binding GO:0070840F:dynein complex binding GO:0000776C:kinetochore GO:0005869C:dynactin complex |
Other
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SRR924681_primary_scf7180003516141_1-1958
Len: 1,957 bp
Hits: 20
E-val: 4.60E-38
Sim: 100%
|
ADB02908.1target of rapamycin |
GO:0006338P:chromatin remodeling GO:0016242P:negative regulation of macroautophagy GO:0031643P:positive regulation of myelination GO:0032006P:regulation of TOR signaling GO:0038202P:TORC1 signaling GO:0043588P:skin development GO:0048565P:digestive tract development GO:0051128P:regulation of cellular component organization GO:0051246P:regulation of protein metabolic process GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0044877F:protein-containing complex binding GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0106310F:protein serine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0031931C:TORC1 complex GO:0031932C:TORC2 complex |
Signal Transduction
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SRR924681_primary_scf7180003516151_1-1524
Len: 1,523 bp
Hits: 20
E-val: 3.00E-250
Sim: 89.02%
|
XP_026095985.1LOW QUALITY PROTEIN: interferon-induced very large GTPase 1-like |
GO:0016042P:lipid catabolic process GO:0003779F:actin binding GO:0004620F:phospholipase activity GO:0005525F:GTP binding GO:0019904F:protein domain specific binding GO:0005634C:nucleus GO:0014069C:postsynaptic density GO:0016020C:membrane GO:0043005C:neuron projection GO:0048471C:perinuclear region of cytoplasm |
Other
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SRR924681_primary_scf7180003516227_173-514
Len: 341 bp
Hits: 20
E-val: 3.40E-37
Sim: 87.64%
|
XP_016295227.1 cadherin-12-like |
GO:0000902P:cell morphogenesis GO:0002009P:morphogenesis of an epithelium GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005912C:adherens junction GO:0016342C:catenin complex |
Other
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SRR924681_primary_scf7180003516315_641-1846
Len: 1,205 bp
Hits: 20
E-val: 1.10E-226
Sim: 83.18%
|
XP_018968548.1 interferon-induced protein with tetratricopeptide repeats 5-like |
GO:0051607P:defense response to virus GO:0005829C:cytosol |
Other
|
|
SRR924681_primary_scf7180003516421_1-1612
Len: 1,611 bp
Hits: 20
E-val: 5.40E-133
Sim: 94.48%
|
XP_018965552.1 sterile alpha motif domain-containing protein 11-like |
GO:0045892P:negative regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0042393F:histone binding GO:0046872F:metal ion binding GO:0005634C:nucleus |
Transcription Regulation
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|
SRR924681_primary_scf7180003516551_165-1130
Len: 965 bp
Hits: 20
E-val: 9.80E-191
Sim: 96.02%
|
XP_026136369.1zinc finger protein ZIC 4-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0021510P:spinal cord development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003516586_130-562
Len: 432 bp
Hits: 20
E-val: 1.80E-22
Sim: 81.31%
|
XP_018944130.1 protein S100-A1-like |
GO:0005509F:calcium ion binding GO:0048306F:calcium-dependent protein binding GO:0005615C:extracellular space GO:0005634C:nucleus GO:0005737C:cytoplasm |
Other
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SRR924681_primary_scf7180003516611_509-1223
Len: 714 bp
Hits: 20
E-val: 7.60E-23
Sim: 57.59%
|
XP_026125061.1DNA polymerase alpha subunit B-like |
GO:0006270P:DNA replication initiation GO:0008283P:cell population proliferation GO:0031101P:fin regeneration GO:0003677F:DNA binding GO:0005658C:alpha DNA polymerase:primase complex |
DNA Metabolism
|
|
SRR924681_primary_scf7180003516617_1-306
Len: 305 bp
Hits: 20
E-val: 3.00E-37
Sim: 97.34%
|
XP_026074640.1indian hedgehog B protein-like |
GO:0001649P:osteoblast differentiation GO:0001708P:cell fate specification GO:0001957P:intramembranous ossification GO:0007224P:smoothened signaling pathway GO:0007267P:cell-cell signaling GO:0010468P:regulation of gene expression GO:0016539P:intein-mediated protein splicing GO:0016540P:protein autoprocessing GO:0048484P:enteric nervous system development GO:0048795P:swim bladder morphogenesis GO:0005113F:patched binding GO:0005509F:calcium ion binding GO:0008233F:peptidase activity GO:0016740F:transferase activity GO:0000139C:Golgi membrane GO:0005615C:extracellular space GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane |
Cell Signaling
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SRR924681_primary_scf7180003516649_814-1191
Len: 377 bp
Hits: 20
E-val: 1.90E-57
Sim: 81.02%
|
XP_016109958.1 thyroxine 5-deiodinase |
GO:0042403P:thyroid hormone metabolic process GO:0042446P:hormone biosynthetic process GO:0043009P:chordate embryonic development GO:0004800F:thyroxine 5'-deiodinase activity GO:0012505C:endomembrane system GO:0016020C:membrane |
Metabolism
|
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SRR924681_primary_scf7180003516678_1-732
Len: 731 bp
Hits: 20
E-val: 1.60E-20
Sim: 77.65%
|
XP_686686.3protein sidekick-1 isoform X3 |
GO:0007156P:homophilic cell-cell adhesion GO:0007416P:synapse assembly GO:0016020C:membrane GO:0045202C:synapse |
Other
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SRR924681_primary_scf7180003516719_452-1550
Len: 1,098 bp
Hits: 20
E-val: 5.30E-23
Sim: 88.51%
|
XP_026100670.1axin-1-like |
GO:0001743P:lens placode formation GO:0007368P:determination of left/right symmetry GO:0009950P:dorsal/ventral axis specification GO:0021797P:forebrain anterior/posterior pattern specification GO:0021877P:forebrain neuron fate commitment GO:0021999P:neural plate anterior/posterior regionalization GO:0030910P:olfactory placode formation GO:0031101P:fin regeneration GO:0032436P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0043507P:positive regulation of JUN kinase activity GO:0046330P:positive regulation of JNK cascade GO:0048048P:embryonic eye morphogenesis GO:0055001P:muscle cell development GO:0090090P:negative regulation of canonical Wnt signaling pathway GO:0090244P:Wnt signaling pathway involved in somitogenesis GO:0008013F:beta-catenin binding GO:0019901F:protein kinase binding GO:0031625F:ubiquitin protein ligase binding GO:0042803F:protein homodimerization activity GO:0060090F:molecular adaptor activity GO:0070411F:I-SMAD binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0030877C:beta-catenin destruction complex |
Signal Transduction
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SRR924681_primary_scf7180003516744_183-1754
Len: 1,571 bp
Hits: 20
E-val: 2.70E-28
Sim: 68.86%
|
XP_026122785.1glycogen phosphorylase, muscle form-like |
GO:0005980P:glycogen catabolic process GO:0048741P:skeletal muscle fiber development GO:0052576P:carbohydrate storage GO:0008184F:glycogen phosphorylase activity GO:0030170F:pyridoxal phosphate binding GO:0005737C:cytoplasm |
Other
|
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SRR924681_primary_scf7180003516763_1-1291
Len: 1,290 bp
Hits: 20
E-val: 1.60E-47
Sim: 57.41%
|
XP_026079812.1AT-rich interactive domain-containing protein 2-like, partial |
GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0035060C:brahma complex |
Transcription Regulation
|
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SRR924681_primary_scf7180003516889_60-983
Len: 923 bp
Hits: 20
E-val: 5.20E-165
Sim: 83.4%
|
XP_018946301.1 protein sprouty homolog 2-like |
GO:0001525P:angiogenesis GO:0009953P:dorsal/ventral pattern formation GO:0040037P:negative regulation of fibroblast growth factor receptor signaling pathway GO:0046580P:negative regulation of Ras protein signal transduction GO:0048513P:animal organ development GO:0060841P:venous blood vessel development GO:0070373P:negative regulation of ERK1 and ERK2 cascade GO:0005829C:cytosol GO:0016020C:membrane |
Cell Signaling
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SRR924681_primary_scf7180003516909_540-1493
Len: 953 bp
Hits: 20
E-val: 1.20E-47
Sim: 57.62%
|
RXN15278.1LINE-1 type transposase domain-containing 1 |
GO:0006508P:proteolysis GO:0005525F:GTP binding GO:0008234F:cysteine-type peptidase activity GO:1990112C:RQC complex |
Protein Degradation
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SRR924681_primary_scf7180003516938_1-1251
Len: 1,250 bp
Hits: 20
E-val: 1.10E-40
Sim: 92.68%
|
XP_016374424.1 neural cell adhesion molecule 1-like isoform X1 |
Other
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|
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SRR924681_primary_scf7180003517033_1-942
Len: 941 bp
Hits: 20
E-val: 9.40E-37
Sim: 94.51%
|
XP_026085271.1zinc finger protein 106-like isoform X1 |
GO:0008286P:insulin receptor signaling pathway GO:0003723F:RNA binding GO:0017124F:SH3 domain binding GO:0005829C:cytosol GO:0016020C:membrane |
Cell Signaling
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SRR924681_primary_scf7180003517116_1-1330
Len: 1,329 bp
Hits: 20
E-val: 5.60E-27
Sim: 97.58%
|
XP_016301662.1 epidermal growth factor receptor substrate 15 isoform X1 |
GO:0006457P:protein folding GO:0006897P:endocytosis GO:0016197P:endosomal transport GO:0005509F:calcium ion binding GO:0045296F:cadherin binding GO:0051082F:unfolded protein binding GO:0005783C:endoplasmic reticulum GO:0030132C:clathrin coat of coated pit |
Stress Response
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SRR924681_primary_scf7180003517145_1-1403
Len: 1,402 bp
Hits: 20
E-val: 4.60E-56
Sim: 50.36%
|
XP_016425099.1 GA-binding protein subunit beta-1-like |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000976F:transcription cis-regulatory region binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003517227_1-1764
Len: 1,763 bp
Hits: 20
E-val: 2.70E-29
Sim: 98.62%
|
XP_016355782.1 bone morphogenetic protein 5-like |
GO:0006552P:L-leucine catabolic process GO:0014032P:neural crest cell development GO:0046951P:ketone body biosynthetic process GO:0060391P:positive regulation of SMAD protein signal transduction GO:0070374P:positive regulation of ERK1 and ERK2 cascade GO:0004419F:hydroxymethylglutaryl-CoA lyase activity GO:0005125F:cytokine activity GO:0008083F:growth factor activity GO:0046872F:metal ion binding GO:0005615C:extracellular space |
Immune Response
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